prot_C-linearis_contig101.752.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.752.1
Unique Nameprot_C-linearis_contig101.752.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length158
Homology
BLAST of mRNA_C-linearis_contig101.752.1 vs. uniprot
Match: A0A6H5KIV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIV8_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 3.090e-31
Identity = 69/108 (63.89%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   34 MRRVTSEGLLQHLADSGVPAAQELQREREEARQMQAASRAALKDANVFGRTKEGRQTFQTILISHAYDVDEGPSTVPDYRRAEILGVHPAVFNAARQRKGEIAAARPP 141
            M+ + +E LLQ L D+GVPAAQE+ +E  +ARQ QAASRAALKDA VFGRT  GRQT+QTIL +HAYD DEG ST+P YR+AEILGV PA F+ ARQR   +    PP
Sbjct:    1 MKAMNAETLLQSLIDNGVPAAQEIHQELADARQFQAASRAALKDAAVFGRTNMGRQTYQTILTAHAYDGDEGASTLPGYRKAEILGVDPAEFSRARQRAKSLQPRVPP 108          
BLAST of mRNA_C-linearis_contig101.752.1 vs. uniprot
Match: A0A6H5JI78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI78_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.320e-28
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0
Query:   34 MRRVTSEGLLQHLADSGVPAAQELQREREEARQMQAASRAALKDANVFGRTKEGRQTFQTILISHAYDVDEGPSTVPDYRRAEILGVHPAVFN 126
            M+ + +E LLQ L D+GVPAAQE+ +E  +ARQ QAASRAALKDA VFGRT  GRQT+QTIL +HAYD DEG ST+P YR+AEILGV PA F+
Sbjct:    1 MKAMNAETLLQSLIDNGVPAAQEIHQELADARQFQAASRAALKDAAVFGRTNMGRQTYQTILTAHAYDGDEGASTLPGYRKAEILGVDPAEFS 93          
BLAST of mRNA_C-linearis_contig101.752.1 vs. uniprot
Match: A0A6H5JIV9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIV9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.710e-27
Identity = 66/111 (59.46%), Postives = 79/111 (71.17%), Query Frame = 0
Query:   34 MRRVTSEGLLQHLADSGVPAAQELQR---EREEARQMQAASRAALKDANVFGRTKEGRQTFQTILISHAYDVDEGPSTVPDYRRAEILGVHPAVFNAARQRKGEIAAARPP 141
            M+ +TSE LL  L+  G+PAAQELQ    + E+ARQ QAASR ALKDA VFGRT +GRQT+QTIL + AYD DEG   +P YR+AEILGV PA F+ ARQR   +    PP
Sbjct:    1 MKSMTSEALLACLSQEGIPAAQELQELQLQLEDARQFQAASREALKDAAVFGRTNQGRQTYQTILTACAYDGDEGTQALPSYRKAEILGVDPAEFSRARQRVKSLQPHLPP 111          
BLAST of mRNA_C-linearis_contig101.752.1 vs. uniprot
Match: A0A6H5KQH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH6_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 7.390e-21
Identity = 52/82 (63.41%), Postives = 60/82 (73.17%), Query Frame = 0
Query:   60 EREEARQMQAASRAALKDANVFGRTKEGRQTFQTILISHAYDVDEGPSTVPDYRRAEILGVHPAVFNAARQRKGEIAAARPP 141
            E E+ARQ QA SRAALKDA VFGRT +GRQT+QTIL + AYD DEG   +P YR+AEILGV PA F+ ARQR   +    PP
Sbjct:   28 ELEDARQFQATSRAALKDAAVFGRTNQGRQTYQTILTACAYDGDEGTQALPSYRKAEILGVDPAEFSRARQRVKSLQPHLPP 109          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KIV8_9PHAE3.090e-3163.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI78_9PHAE2.320e-2867.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIV9_9PHAE3.710e-2759.46Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQH6_9PHAE7.390e-2163.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:490904..493204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.752.1mRNA_C-linearis_contig101.752.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 490904..493204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.752.1 ID=prot_C-linearis_contig101.752.1|Name=mRNA_C-linearis_contig101.752.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=158bp
QCLLLSGGNGSEDSCLREEACDPRDTSAPFLVAMRRVTSEGLLQHLADSG
VPAAQELQREREEARQMQAASRAALKDANVFGRTKEGRQTFQTILISHAY
DVDEGPSTVPDYRRAEILGVHPAVFNAARQRKGEIAAARPPPCRSVFCSR
RAPRSCP*
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