mRNA_C-linearis_contig100.697.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig100.697.1
Unique NamemRNA_C-linearis_contig100.697.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 3.560e-127
Identity = 216/264 (81.82%), Postives = 236/264 (89.39%), Query Frame = 3 
Query: 1275 SLPASVVNRSRLAQNRQESTDVYEFPTPTTSSLTAATTAASPTPPSTPGTTFSVCTSNSQNRVAVIKAGDRFMCSRNECRRVESLRSAATGDTASALLSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHVKYEKGGNKMFQCKASNGSPCSDGSSRKNTCRCVHSAIVAVYIYDRYKPGVAGQELELERDGEMDGMEFGPEG 2063
            S   SVV+RSRLAQNRQESTDVYEFPT TTSS TAATTAASPTPPS PGTT+SVCTSN QNRVAVIKAG RF+CSR +CRR+E L SAATGDTASAL S CAHAEVV EA++TS  MPKADAL S G   SAL KVPAGTFN  TVA+MRARADQAAKEG+PLLVR GNTKYFAVRDGQKFNRTVIGEWGHVKY++ G+K+FQCKAS+GSPCSDG+SRK+T RC+H+AIVAVYIYDRYK GVAG+ELELERDG+MDGMEFGPEG
Sbjct:  246 SKAVSVVDRSRLAQNRQESTDVYEFPT-TTSSPTAATTAASPTPPSGPGTTYSVCTSNGQNRVAVIKAGARFLCSRPDCRRIEGLSSAATGDTASALPSRCAHAEVVIEAEKTSMPMPKADALLSAGDFESALDKVPAGTFNQRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKVFQCKASDGSPCSDGASRKSTGRCIHAAIVAVYIYDRYKSGVAGEELELERDGDMDGMEFGPEG 508
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 8.930e-126
Identity = 213/258 (82.56%), Postives = 231/258 (89.53%), Query Frame = 3 
Query: 1275 SLPASVVNRSRLAQNRQESTDVYEFPTPTTSSLTAATTAASPTPPSTPGTTFSVCTSNSQNRVAVIKAGDRFMCSRNECRRVESLRSAATGDTASALLSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHVKYEKGGNKMFQCKASNGSPCSDGSSRKNTCRCVHSAIVAVYIYDRYKPGVAGQELELERDGEMDGM 2045
            S   SVV+RSRLAQNRQESTDVYEFPT TTSS TAATTAASPTPPS PGTT+SVCTSNSQNRVAVIKAGDRF+CSR +CRR+E L SAATGDTASAL S CAHAEVV EA+RTS  MPKADAL S G   SAL KVPAGTFNP TVA+MRARADQAAKEG+PLLVR GNTKYFAVRDGQKFNRTVIGEWGHVKY++ G+K+FQCKASNGSPCSD SSRK+T RCVH+AIVAVYIYDRYK GVAG+ELELERDG+M+ +
Sbjct:  330 SKTVSVVDRSRLAQNRQESTDVYEFPT-TTSSPTAATTAASPTPPSGPGTTYSVCTSNSQNRVAVIKAGDRFLCSRPDCRRIEGLSSAATGDTASALPSRCAHAEVVIEAERTSMPMPKADALLSAGDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKVFQCKASNGSPCSDSSSRKSTGRCVHAAIVAVYIYDRYKSGVAGEELELERDGDMESL 586
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5KZ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ13_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 2.520e-75
Identity = 126/148 (85.14%), Postives = 136/148 (91.89%), Query Frame = 3 
Query: 1620 MPKADALFSGGGVTSALAKVPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHVKYEKGGNKMFQCKASNGSPCSDGSSRKNTCRCVHSAIVAVYIYDRYKPGVAGQELELERDGEMDGMEFGPEG 2063
            MPKADAL S G   SAL KVPAGTFNP TVA+MRARADQAAKEG+PLLVR GNTKYFAVRDGQKFNRTVIGEWGHVKY++ G+K+FQCKASNGSPCSD SSRK+T RCVH+AIVAVYIYDRYK GVAG+ELELERDG+MDGMEFGPEG
Sbjct:    3 MPKADALLSAGDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKVFQCKASNGSPCSDSSSRKSTGRCVHAAIVAVYIYDRYKSGVAGEELELERDGDMDGMEFGPEG 150
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5KAW8_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW8_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 2.650e-52
Identity = 147/377 (38.99%), Postives = 182/377 (48.28%), Query Frame = 3 
Query: 1281 PASVVNRSRLAQNRQESTDVYEFPTPTTSSLTAATTAASPTPPSTPGTTFSVCTSNSQNRVAVIKAGDRFMCSRNECRRVESLRSAATGDTASALLSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIG------------------------------------------------------------------------------------------------------------------EWGHVKYE-KGGNKMFQCKASNGSPCSDGSSRKNTCRCVHSAIVAVYIYDRYKPGVAGQELELERDGEMDGMEFGPEG 2063
            P +V++RS  A+ R   T V+EFP P+   +TAATT  S TP S  GTT+SVCTS S NRVAVIKAG+++MCSRN+C        +ATG T   L + C HAEVV EA+ +S  MPKAD +FS      AL  VP GTFN  T  AM  RADQAA+EGVP+LV  G+T+YF ++DG + +RTVIG                                                                                                                  EW HVKY+ KGG+KMFQCK       + G SR+ T RC H+AIVA+YIY R K G+ G  ++LE DG+MDGMEFGPEG
Sbjct:   87 PVAVLDRSTQAKTRHVRTSVFEFPAPSPPVVTAATTTLSATPTSGTGTTYSVCTSVSLNRVAVIKAGNKYMCSRNDC--------SATGVTDPPLPARCPHAEVVLEAEGSSTPMPKADPVFSAEEFRQALTTVPPGTFNESTTRAMHTRADQAAQEGVPVLVGLGSTRYFGIKDGHENDRTVIGGLYTIKAPGLSEPSLPRLSTKPVTSLHTPNTFTLFRKKRKIIDNARNVCRCATVRCRPHAPVSLLRCRCSGAAVAGPSTTKLDPLRFVHALVAVLPSRFLAFSLVALRRGEEGVEWAHVKYDDKGGSKMFQCKG-----WAKGKSRRKTGRCFHAAIVAIYIYHRDKIGLGGG-VDLELDGDMDGMEFGPEG 449
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5JH13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH13_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.710e-50
Identity = 118/206 (57.28%), Postives = 144/206 (69.90%), Query Frame = 3 
Query: 1281 PASVVNRSRLAQNRQESTDVYEFPTPTTSSLTAATTAASPTPPSTPGTTFSVCTSNSQNRVAVIKAGDRFMCSRNECRRVESLRS--AATGDTASALLSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHVKYE-KGGNKMFQCK 1886
            P  V++RS  A+ R     V+EFP  +   +TAATT  S TP S  G T SVCTS S NRVAVIKAG+++MCSR+ECRRV ++++  AA G T S L + C HAEVV EA+R+S  MPKAD LFS G    AL  VP GTFN  T  AM  RADQAA+ GVP+LV  G+T+ F ++DG + NRTVIGEW HVKY+ KGG+KMFQCK
Sbjct:  576 PVPVLDRSTQAKTRHVRASVFEFPARSPPVVTAATTTLSATPTSGTGATHSVCTSVSLNRVAVIKAGNKYMCSRDECRRVGNVQTSAAAAGVTGSPLPARCPHAEVVLEAERSSTPMPKADPLFSAGEFREALTTVPPGTFNKSTTRAMHTRADQAAQAGVPVLVGLGSTRCFEIKDGHENNRTVIGEWAHVKYDDKGGSKMFQCK 781
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: D7FN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN79_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 2.270e-45
Identity = 110/207 (53.14%), Postives = 139/207 (67.15%), Query Frame = 3 
Query: 1281 PASVVNRSRLAQNRQESTDVYEFPTPTTSSLTAATTAASPTPPSTPGTTFSVCTSNSQNRVAVIKAGDRFMCSRNECRRVESLRS--AATGDTASALLSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAK-VPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHVKYE-KGGNKMFQCK 1886
            P   + RS LA++R  ST ++EFP  T  +LT A T  S TP    G T+SVCTS    RVAVIK GD F+CSR +CRRV++ ++  AATG T SAL + C HAEVV +A+R+S  MP AD LFS      AL   VPAG F+  T  AM ARADQAA++GVP+LV  G+TKYF + DG + NR V+G W HVKY+ + G+K+FQCK
Sbjct:  300 PVPALERSALAKSRIGSTSIFEFPARTRPALTVARTTPSATPTGGAGKTYSVCTSVGLQRVAVIKTGDEFICSRKDCRRVKNPQTSAAATGGTDSALPAPCCHAEVVLQAERSSMPMPTADPLFSAEEFRHALTTAVPAGAFSEGTTRAMHARADQAAEDGVPVLVGLGSTKYFGITDGLQNNRKVVGGWAHVKYDDRDGSKIFQCK 506
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5KVV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV8_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 6.180e-41
Identity = 100/210 (47.62%), Postives = 136/210 (64.76%), Query Frame = 3 
Query: 1281 PASVVNRSRLAQNRQESTDVYEFPTPTTSSLTAATTAASPTPPSTP--GTTFSVCTSNSQNRVAVIKAGDRFMCSRNECRRVESL--RSAATGDTASALLSHCAHAEVVTEADRTSQMPKADA---LFSGGGVTSALAKVPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHVKYEKGGNKM-FQCK 1886
            P S+++RS  A+ R   T V+E P+  T+  TA +T   PTP  TP  GTT+S CTS  QNRV+V+++  R+MCSR EC+ +E+L  ++AA GDT   L  HCAHA+VV +A + S +P A A   L S      AL  VP GTFN  T+ A+RAR  +A + G+P+LV+ G+TK+FAVRDG  FNR ++G W HVK E+ G K   +CK
Sbjct:   38 PTSLLDRSTQARTRNVGTSVFELPSTQTTPTTADST---PTPAPTPREGTTYSTCTSVGQNRVSVVESNGRYMCSRPECKTIETLSAKAAAGGDTECVLRRHCAHADVVVQA-KASSVPMAGATALLPSAEEFLRALDAVPTGTFNKHTMQAIRARVARAEELGIPVLVKLGDTKFFAVRDGPNFNRNIVGGWAHVKCEESGGKTTLRCK 243
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5KLI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI9_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.700e-31
Identity = 73/119 (61.34%), Postives = 84/119 (70.59%), Query Frame = 3 
Query: 1536 AATGDTASALLSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTVAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHVKYE-KGGNKMFQCK 1886
            AATG T S L + C   EVV E +R+S  MPKAD LFS G    AL  VP GTFN  T  AM  RADQAAKEGVP+LV  G+T+ F ++DG + NRTVIGEW HVKY+ KGG+KMFQCK
Sbjct:   10 AATGVTGSPLPARCPPVEVVLEVERSSTPMPKADPLFSAGEFREALTTVPPGTFNESTTRAMHTRADQAAKEGVPVLVGLGSTRCFGIKDGHENNRTVIGEWAHVKYDDKGGSKMFQCK 128
[Close]
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5L2J5_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J5_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 5.240e-13
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 3 
Query: 1872 MFQCKASNGSPCSDGSSRKNTCRCVHSAIVAVYIYDRYKPGVAGQELELERDGEMDGMEFGPE 2060
            M   K +NG+PCSD +SRK+T RCVH+ IVAVYIYDR +   +G+  ELERDGEMDGMEFG E
Sbjct:   16 MALVKGNNGNPCSDSTSRKHTGRCVHAGIVAVYIYDR-QVSSSGEGPELERDGEMDGMEFGSE 77
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5L6Z2_9PHAE3.560e-12781.82CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L8M0_9PHAE8.930e-12682.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ13_9PHAE2.520e-7585.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAW8_9PHAE2.650e-5238.99CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JH13_9PHAE1.710e-5057.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN79_ECTSI2.270e-4553.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVV8_9PHAE6.180e-4147.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLI9_9PHAE1.700e-3161.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2J5_9PHAE5.240e-1365.08CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig100contigC-linearis_contig100:345055..349314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size2065
Cds size1065
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig100.697.1prot_C-linearis_contig100.697.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig100 347246..349314 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927352.9531393-UTR-C-linearis_contig100:345054..3452331622927352.9531393-UTR-C-linearis_contig100:345054..345233Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 345055..345233 -
1690879646.9742348-UTR-C-linearis_contig100:345054..3452331690879646.9742348-UTR-C-linearis_contig100:345054..345233Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 345055..345233 -
1622927352.9642625-UTR-C-linearis_contig100:345673..3460431622927352.9642625-UTR-C-linearis_contig100:345673..346043Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 345674..346043 -
1690879646.983449-UTR-C-linearis_contig100:345673..3460431690879646.983449-UTR-C-linearis_contig100:345673..346043Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 345674..346043 -
1622927352.972951-UTR-C-linearis_contig100:346264..3465231622927352.972951-UTR-C-linearis_contig100:346264..346523Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 346265..346523 -
1690879646.99134-UTR-C-linearis_contig100:346264..3465231690879646.99134-UTR-C-linearis_contig100:346264..346523Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 346265..346523 -
1622927352.9828894-UTR-C-linearis_contig100:347053..3472451622927352.9828894-UTR-C-linearis_contig100:347053..347245Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 347054..347245 -
1690879646.9994326-UTR-C-linearis_contig100:347053..3472451690879646.9994326-UTR-C-linearis_contig100:347053..347245Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 347054..347245 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927352.994257-CDS-C-linearis_contig100:347245..3480941622927352.994257-CDS-C-linearis_contig100:347245..348094Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 347246..348094 -
1690879647.0103478-CDS-C-linearis_contig100:347245..3480941690879647.0103478-CDS-C-linearis_contig100:347245..348094Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 347246..348094 -
1622927353.0045145-CDS-C-linearis_contig100:349098..3493141622927353.0045145-CDS-C-linearis_contig100:349098..349314Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 349099..349314 -
1690879647.022785-CDS-C-linearis_contig100:349098..3493141690879647.022785-CDS-C-linearis_contig100:349098..349314Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 349099..349314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig100.697.1

>prot_C-linearis_contig100.697.1 ID=prot_C-linearis_contig100.697.1|Name=mRNA_C-linearis_contig100.697.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=355bp
MFSDCTLVRGGSPLPAGFRGSRTCTAHTHDTLLDTLALRTAAPPDLGGDF
ATMQRAADLEDAGAEQRIRSDDGGTGMDVRAGAQHSEQEDRGGQQRGAFN
IHRRSGGARGLGIRSSSPSPRATDLSNSCSAHLEDGGGGGTMDSRAQMNR
VYHGNGAAAGGAGGIGAELFDPGSWGMHIGVRGLDIGGVPASPGSLSPAM
AGGTGMPPMSPANVSAAGIAPLPGAPIRVGGLDIGGAPALGGSLSRAMAG
GTGVPPMSPANVPAAGIALLPGAVQPRPPLAMPQLLQTTGGSGGGGEKRA
ATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKGNAEARRQKL
PRVV*
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mRNA from alignment at C-linearis_contig100:345055..349314-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig100.697.1 ID=mRNA_C-linearis_contig100.697.1|Name=mRNA_C-linearis_contig100.697.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4260bp|location=Sequence derived from alignment at C-linearis_contig100:345055..349314- (Chordaria linearis ClinC8C monoicous)
ATGTTCTCGGATTGTACTCTGGTTCGAGGTGGTTCTCCGTTGCCGGCTGG
CTTCCGAGGGTCCCGGACCTGCACAGCACACACGCATGATACACTGCTGG
ATACACTCGCCCTGCGGACAGCCGCACCGCCCGACTTGGGAGGAGATTTC
GCAACTATGCAGAGGGCAGCCGACCTGGAAGACGCAGGAGCAGAGCAACG
CATCCGAAGCGATGATGTAAGTATTGTCACGAGTTCGTATCGAATACTGA
TTGGAGCTGCTCTCCGCTTTGGTATCTGTCTGTCCCGGCTCGCTTTGCGT
ATTCTCTACCTAGTATCTGTTGGTATCCAACGGAGCTCGGAGCCCATCCC
AACAGCCAGGAGCCAGCGGTTGGCTTGACTGCTGTGATCTAAACGTGTTT
GCAGTCTCATATACTTCCAAGCCTCGGGTCACCTCTGCTCCCCCCGCCTC
TTTCGCGAGACTACGACCGAGCAGCGGGTGGAATAGAGTTGCGAGCAGTA
GATCTAAGCAGTAGAGTCGACGCCTCTGGGCTACCTACTGCTGTAGACTT
TTCAGACACATGCACGGCCCCTCTGCGGAGACTGTGCCCCGGTTTGTATG
GGCGTTGGTGTAGAGTTGACACGAAGTATTGGACAAACGGCTCAACTCAC
GAGTGCGGGTGCGTGTGCGTGCAGCTTACTGGGTTCCTTCCTACCGCCAG
CGCAGCAGCGTGTCTTATATAGCAGTGTCTATCCCCAAATTCTCTGAAAC
GATGTTGAACTCGAACCCAGCTGGTCGGGTCAGACGCTACCACATAAGCT
GACGCACTGCATGAGCTGGGGAACCCAAGATGTCGCTTTTTTTACATATA
GACTAGACTATCCCATTCGCGGCGGCAGAGGGAGAACTTATTTCGCACAA
GGGAGGGATGATCGATCGCAAACGTGTTTTTGAAATAGGGAATACTCACG
AAGCAGGGCCGCAGTGTTCATAGATGTGCCGGCATGAGACATTAACCGCC
TGCCGGAGGCAGTCATGTACATGAAGAAAGATTGTGCTGTCTGGGCGGCC
GGGCGGGCACTTTCACCGGAGGTCGACTCGCCGAACGTATCATGGTGCCC
GCGTCTGGCTAATGCCGTAGCTTGCTTGCTGTATGTACCATCTTTATCAA
GTTTGAACATGCTGAGTGTTGAAAATTTATCATCTTCCCCCGTTCAAACC
TCTCGTACTGTTGGAATAAGGGCGGCACTGGCATGGACGTGAGGGCGGGC
GCACAACATTCGGAGCAGGAGGATCGGGGCGGTCAGCAGCGGGGAGCATT
CAATATTCATCGTCGGTCAGGAGGGGCACGTGGATTGGGTATTCGTTCTT
CTTCGCCGTCACCGAGGGCAACTGATTTGTCGAACAGCTGTTCAGCTCAT
CTGGAGGATGGGGGGGGCGGGGGCACGATGGACTCGCGGGCTCAGATGAA
CCGCGTGTACCATGGGAACGGGGCTGCAGCAGGTGGTGCTGGTGGTATCG
GTGCGGAGCTGTTCGACCCGGGTAGTTGGGGAATGCACATTGGCGTTCGC
GGGTTAGACATCGGAGGTGTACCTGCCTCCCCGGGCTCTTTGTCTCCGGC
GATGGCGGGTGGCACGGGGATGCCGCCGATGTCCCCGGCCAATGTGTCTG
CGGCCGGCATCGCCCCGCTCCCGGGTGCGCCCATACGCGTTGGCGGATTA
GACATCGGAGGGGCACCGGCGTTAGGGGGCTCTTTGTCTCGGGCGATGGC
GGGTGGCACGGGGGTGCCGCCGATGTCCCCGGCAAATGTGCCTGCGGCCG
GCATCGCCCTTCTCCCGGGTGCGGTCCAGCCACGTCCGCCACTTGCAATG
CCACAGCTTCTTCAGACCACAGGCGGTAGTGGAGGGGGCGGGGAGAAGAG
GGCAGCCACAGGAACACTAGCACACGAGGACCTCAGCTCAACCCTGGAAC
ATGAGAGCAACAAACAGCCACGGACTGCCGGGCCCGGCACTTCCGCCAGC
GTATCGACGGGGGGGAGGCGGAAAGGGAATGCTGAGGCAAGAAGGCAAAA
ATTGCCACGGGTGGTGTAGGACCACTAAGCCCACGGGCAACGTCAGGCAT
GCTTGCCGGGGTGGGGGCGTCGACGAGGGTGGTGAGGTACAGGAATGCAG
CTATTGGCTGTGCCAGAGGTGTTTGGGACGATGGCAAGAAAAGTCTCAAC
AGTCGGGAGGATTCTGGTGCTGCCTACATGAGGGGAGGGAGTGGTGCCCG
TGCAAAGACAGGTGAGATTTTGGGTTAGTAAAAAAGTGTGCCCACACGTC
GTTCATACAACATGTGGGTGAAACAGAAGGATGCAGATATCGTTAGCCTC
TTCATGAAAGAGTCAGAGAGGGGAGGTTTGGCTTGCACGTGGACAGCAAA
ACTTCTTTGGATCAAATGTGCAGCTCGCGTCCACGCTCGTCCGGCGTTGA
GAGAACGATACCCCCAAGTAGAATGTAGAGCTGATGAGCTGAGGGATGTA
CTTCGACATGCCATGGAAGATGGGGCGTATCGGGTAAGCGATAAGGGGTA
CGTTGCTATGTATGCATGAGATGAGCAGGCGTAGGATGAAAACTTCGAGG
AAGTTGTTCTTGTTCTTGCAAGGTTTACCCGCGAAGCCTACAATCCCTAG
AGCCATATATTTGCAATCTGTCCTGCTTCTCTCGCATTTTGTACATTGAT
AAGGTACACGAATCGACCGTCTTGTCTGATCCATGTTCCGGCGGCCGCCT
TGCTCCACTGTTTATCACGCCGTCTTCACCGCCTAATTTAGGGTTTCCAA
GACGAGCAAGCCTGCCTGCCTCGGTGGTGAATCGATCCAGGCTAGCGCAG
AATCGTCAGGAGAGCACGGACGTGTACGAGTTCCCGACCCCAACAACCTC
ATCTCTCACGGCTGCAACGACAGCTGCTAGCCCTACACCACCATCTACGC
CGGGCACGACTTTCTCGGTGTGCACATCCAACAGCCAAAACCGCGTGGCG
GTGATCAAGGCTGGTGACCGGTTCATGTGCTCCCGGAACGAGTGCAGACG
GTGAGAGATAGACTAAAGACTTGTCGTTGCTCCAAGTTAGGCGTTATGCG
CATAGACGTACATAAATATGCTTCCTCCTTGATGGTATTCCTCAGGACAC
ATCTTTCGGTTGAAGCCCAAGACGGCAACTGCTTCCTCAGAGTCGTCTGC
GTAAGTGCTCGAACCCAAAACGGTCTCACACTCGGCCCCATGACGCCAAT
TTTTCCGCCTTTTCAATCCAGAGTCGAGAGTCTCAGGTCCGCAGCCACTG
GTGACACGGCGTCTGCATTGCTATCTCACTGCGCTCACGCAGAGGTCGTG
ACCGAGGCAGACAGAACGTCGCAGATGCCAAAAGCAGATGCTCTGTTCTC
GGGGGGGGGGGTTACAAGCGCGTTAGCTAAAGTTCCAGCAGGAACTTTCA
ACCCACCCACCGTGGCAGCCATGCGCGCGCGCGCTGACCAGGCGGCGAAA
GAAGGCGTGCCGTTGCTTGTCCGCGCCGGCAACACGAAGTACTTTGCGGT
GCGGGACGGCCAGAAGTTCAACCGCACAGTGATTGGCGAGTGGGGGCACG
TGAAGTACGAGAAGGGCGGGAATAAAATGTTCCAGTGCAAGGTGGGTGAA
GTTTCAGGTTCAACGTGCGGTGGGGTAATGTCATCATGGTTGACGTGCTT
AGGGGAAGTCAGGGTACCTAGTGGTGGTTTGGTAAACCGTGGGTCCGATA
GGAATGATGACTCTCTTGTACAAAGAAAAGCGTTGTTTCAGGTGATGAGC
CCAAGAACGGCAACACCTAAACAGCGTATGGTACTAAGTACGTCGATATT
GCACGGCGTGAAACTTGGGATGTACCCATTGCGAACACACTGTCGGAATG
GACATGATATATGCGTTTTTTTTTCTCGGATGATGGATCGATACGCATCC
GGAGGTTCCGACACCTGCAGTCTTGCGACTTGACCCCGAAATCCTACCCT
CCAGCGTACCTCAATGCCCGGCTCAATGGCTGCTGATGTTTTTTTCCCTC
TCGGTTTTTCTCATGCTGGCATTTGATAAAGGCGAGCAACGGCAGCCCGT
GCAGTGACGGCTCGTCGAGGAAGAATACCTGTCGTTGTGTTCACTCCGCC
ATCGTTGCGGTGTACATTTACGACCGGTACAAACCCGGCGTTGCGGGGCA
AGAGCTGGAGCTGGAGCGTGATGGCGAAATGGACGGCATGGAATTCGGGC
CAGAGGGGTG
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Coding sequence (CDS) from alignment at C-linearis_contig100:345055..349314-

>mRNA_C-linearis_contig100.697.1 ID=mRNA_C-linearis_contig100.697.1|Name=mRNA_C-linearis_contig100.697.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at C-linearis_contig100:345055..349314- (Chordaria linearis ClinC8C monoicous)
ATGTTCTCGGATTGTACTCTGGTTCGAGGTGGTTCTCCGTTGCCGGCTGG
CTTCCGAGGGTCCCGGACCTGCACAGCACACACGCATGATACACTGCTGG
ATACACTCGCCCTGCGGACAGCCGCACCGCCCGACTTGGGAGGAGATTTC
GCAACTATGCAGAGGGCAGCCGACCTGGAAGACGCAGGAGCAGAGCAACG
CATCCGAAGCGATGATATGTTCTCGGATTGTACTCTGGTTCGAGGTGGTT
CTCCGTTGCCGGCTGGCTTCCGAGGGTCCCGGACCTGCACAGCACACACG
CATGATACACTGCTGGATACACTCGCCCTGCGGACAGCCGCACCGCCCGA
CTTGGGAGGAGATTTCGCAACTATGCAGAGGGCAGCCGACCTGGAAGACG
CAGGAGCAGAGCAACGCATCCGAAGCGATGATGGCGGCACTGGCATGGAC
GTGAGGGCGGGCGCACAACATTCGGAGCAGGAGGATCGGGGCGGTCAGCA
GCGGGGAGCATTCAATATTCATCGTCGGTCAGGAGGGGCACGTGGATTGG
GTATTCGTTCTTCTTCGCCGTCACCGAGGGCAACTGATTTGTCGAACAGC
TGTTCAGCTCATCTGGAGGATGGGGGGGGCGGGGGCACGATGGACTCGCG
GGCTCAGATGAACCGCGTGTACCATGGGAACGGGGCTGCAGCAGGTGGTG
CTGGTGGTATCGGTGCGGAGCTGTTCGACCCGGGTAGTTGGGGAATGCAC
ATTGGCGTTCGCGGGTTAGACATCGGAGGTGTACCTGCCTCCCCGGGCTC
TTTGTCTCCGGCGATGGCGGGTGGCACGGGGATGCCGCCGATGTCCCCGG
CCAATGTGTCTGCGGCCGGCATCGCCCCGCTCCCGGGTGCGCCCATACGC
GTTGGCGGATTAGACATCGGAGGGGCACCGGCGTTAGGGGGCTCTTTGTC
TCGGGCGATGGCGGGTGGCACGGGGGTGCCGCCGATGTCCCCGGCAAATG
TGCCTGCGGCCGGCATCGCCCTTCTCCCGGGTGCGGTCCAGCCACGTCCG
CCACTTGCAATGCCACAGCTTCTTCAGACCACAGGCGGTAGTGGAGGGGG
CGGGGAGAAGAGGGCAGCCACAGGAACACTAGCACACGAGGACCTCAGCT
CAACCCTGGAACATGAGAGCAACAAACAGCCACGGACTGCCGGGCCCGGC
ACTTCCGCCAGCGTATCGACGGGGGGGAGGCGGAAAGGGAATGCTGAGGC
AAGAAGGCAAAAATTGCCACGGGTGGTGTAGGGCGGCACTGGCATGGACG
TGAGGGCGGGCGCACAACATTCGGAGCAGGAGGATCGGGGCGGTCAGCAG
CGGGGAGCATTCAATATTCATCGTCGGTCAGGAGGGGCACGTGGATTGGG
TATTCGTTCTTCTTCGCCGTCACCGAGGGCAACTGATTTGTCGAACAGCT
GTTCAGCTCATCTGGAGGATGGGGGGGGCGGGGGCACGATGGACTCGCGG
GCTCAGATGAACCGCGTGTACCATGGGAACGGGGCTGCAGCAGGTGGTGC
TGGTGGTATCGGTGCGGAGCTGTTCGACCCGGGTAGTTGGGGAATGCACA
TTGGCGTTCGCGGGTTAGACATCGGAGGTGTACCTGCCTCCCCGGGCTCT
TTGTCTCCGGCGATGGCGGGTGGCACGGGGATGCCGCCGATGTCCCCGGC
CAATGTGTCTGCGGCCGGCATCGCCCCGCTCCCGGGTGCGCCCATACGCG
TTGGCGGATTAGACATCGGAGGGGCACCGGCGTTAGGGGGCTCTTTGTCT
CGGGCGATGGCGGGTGGCACGGGGGTGCCGCCGATGTCCCCGGCAAATGT
GCCTGCGGCCGGCATCGCCCTTCTCCCGGGTGCGGTCCAGCCACGTCCGC
CACTTGCAATGCCACAGCTTCTTCAGACCACAGGCGGTAGTGGAGGGGGC
GGGGAGAAGAGGGCAGCCACAGGAACACTAGCACACGAGGACCTCAGCTC
AACCCTGGAACATGAGAGCAACAAACAGCCACGGACTGCCGGGCCCGGCA
CTTCCGCCAGCGTATCGACGGGGGGGAGGCGGAAAGGGAATGCTGAGGCA
AGAAGGCAAAAATTGCCACGGGTGGTGTAG
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