Homology
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match:
A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)
HSP 1 Score: 127 bits (320), Expect = 5.860e-29
Identity = 136/251 (54.18%), Postives = 146/251 (58.17%), Query Frame = 0
Query: 142 MDSRAQMNRVYHGNGAAAGGAGGIGAELFDPGSWGMHIGVRGLDIGGVPASP-GSLSPAMAGGTGMPPMSPANVSAAGIAPLPGA---------------PIRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------------------------------VQPRPPLAMPQLL---QTTGGSGXXGEKRAATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKG 341
M+S A MNRV GNGAA GAGG+GA LFDP S G+H+G GLD+G PA P GSL A G GMPPMSPANVSA IAP PGA P+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QPRP LAMPQLL QTT SG G KRAA TLAH DL T +H+S+ Q RT GPGTSAS STGGRRKG
Sbjct: 1 MNSGAPMNRV--GNGAATAGAGGLGATLFDPSSGGVHMGAGGLDMGRAPAGPPGSLPRASMCGAGMPPMSPANVSAPSIAPHPGAGMSDSGLDIGLAQGPPVSLRLATTCGAEMPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPPLSPANVSAPSIAPGPRRAQPRPALAMPQLLPVPQTTVSSGGVGGKRAAAETLAHVDLIPTTDHDSDNQRRTDGPGTSASTSTGGRRKG 249
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match:
A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)
HSP 1 Score: 90.1 bits (222), Expect = 4.980e-16
Identity = 83/166 (50.00%), Postives = 91/166 (54.82%), Query Frame = 0
Query: 179 IGVRGLDIGGVPASPGSLSPAMAGGTGMPPMSPANVSAAGIAPLPGAPIRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQPRPPLAMPQLL---QTTGGSGXXGEKRAATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKG 341
+G G+DIG P SL A G MP +SPANVSA+ IA PG + V XXXXXXXXXXX QPRP LAMPQLL QTT SG G KRAA TLAH DL T +H+S+ Q RT GPGTSAS STGGRRKG
Sbjct: 1 MGDSGIDIGHAQGPPVSLRLATTCGAEMP-ISPANVSASSIASHPGPLMGVGGADMRGAPGSSGGFPRATMCGAGMPPLXXXXXXXXXXXPGPRRAQPRPALAMPQLLPVPQTTVSSGGVGGKRAAAETLAHVDLIPTTDHDSDNQRRTDGPGTSASTSTGGRRKG 165
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match:
D7FN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN79_ECTSI)
HSP 1 Score: 62.8 bits (151), Expect = 3.870e-7
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 273 AVQPRPPLAMPQLL--------QTTGGSGXXGEKRAATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKG 341
A QPR PLAMP + QTTG SG E R A GT HE+L+S++E ESN+Q A G S+SVSTGGRRKG
Sbjct: 148 ANQPRSPLAMPMFIPIRTSPAPQTTGTSGGVRENRGA-GTFVHENLNSSVEPESNRQLAAAVLGMSSSVSTGGRRKG 223
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
M F S D C T L V R G G S P L P A G F R G S R T C T A H T H D T L L D T L A L R T A A P P D L G G D F A T M Q R A A D L E D A G A E Q R I R S D D G G T G M D V R A G A Q H S E Q E D R G G Q Q R G A F N I H R R S G G A R G L G I R S S S P S P R A T D L S N S C S A H L E D G G G G G T M D S R A Q M N R V Y H G N G A A A G G A G G I G A E L F D P G S W G M H I G V R G L D I G G V P A S P G S L S P A M A G G T G M P P M S P A N V S A A G I A P L P G A P I R V G G L D I G G A P A L G G S L S R A M A G G T G V P P M S P A N V P A A G I A L L P G A V Q P R P P L A M P Q L L Q T T G G S G G G G E K R A A T G T L A H E D L S S T L E H E S N K Q P R T A G P G T S A S V S T G G R R K G N A E A R R Q K L P R V V * 50 100 150 200 250 300 350 Expect = 5.86e-29 / Id = 54.18 Expect = 4.98e-16 / Id = 50.00 Expect = 3.87e-7 / Id = 54.55 Sequence A0A6H5L8M0_9PHAE A0A6H5L6Z2_9PHAE D7FN79_ECTSI back to top
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig100.697.1 ID=prot_C-linearis_contig100.697.1|Name=mRNA_C-linearis_contig100.697.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=355bp back to top