prot_C-linearis_contig10.496.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.496.1
Unique Nameprot_C-linearis_contig10.496.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length672
Homology
BLAST of mRNA_C-linearis_contig10.496.1 vs. uniprot
Match: A0A6H5KL36_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL36_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.690e-57
Identity = 211/465 (45.38%), Postives = 230/465 (49.46%), Query Frame = 0
Query:  216 APALSTRPSSDSMVGIADSPHMLPEGLKTDEEYYGGRRGCGSXXXXXXXXXXXXXXXXXXXXSGGQTELAGTVAGDGEAEADRPPSTCDSSVGGDNTTQVGSFHLPETGSSARGPAGIHPGAEEGAGVGMGNRXXXXXXXXXXXXXXXXXLEAESEAG-VTVVTAAETPAA---ATPALAASAGWGSXXXXXXXXXXXXXXXXXXXXXXCLLDAFREPEGNDWGELEDWQGLPGLQLAGXXXXXXATSPRLQVPALIFRSGTVDEGDVLSLHGQPRSRKPEAISPAKYGGSE---RPHPHPTRRPXXXXXXXXXXXXXXXXXXXXXESERA-RVGPRMMGRPRPIRTTAAXXXXXXXXXXFLGFDGYDDGESGTSPGEDVGGWIGRTGXXXXXXXXXXXXXXXXXXGQPLLLSLADLTTAGLQKLLKAEGGSKMFFDPDSQRWVGEEVDLSGFEDPKSSSMGSAS 672
            AP+L TR SS S VGIADSP MLPEGLKTDEE   GR     XXXXXXXX              G T  +G V          PP  C  +VGG  T   G              AG     +     G+G                     AE+E G V VV AAE P     A  A AA  G G                        LLD +REPEGNDWGELEDW GLPGLQLA          P L+VP+LIFR GTVDEGDVLSLHG+PRSR PEA SPAKYG +E   R  P                           + ER   V PRM  +   IR T                    DG +G       GGW+ R+G XXXXXXXXXX        QPLL+SLADLTTAGLQKLL+AEGGSKMFFDPDSQRWVGEEVDLSGFEDP +SSMGS S
Sbjct:   41 APSLVTRRSSGSTVGIADSPQMLPEGLKTDEEERSGRPAATXXXXXXXXXPKGEGV--------GPTGASGPV----------PPDQC-RAVGGAATGAAG--------------AGREALGDNDTPGGLG---------------------AEAEGGLVPVVAAAEPPVPPKFAGRAEAAEQGAGDGRIGGS-----------------LLDTYREPEGNDWGELEDWHGLPGLQLANAGDKV----PTLKVPSLIFRPGTVDEGDVLSLHGRPRSRNPEASSPAKYGSAEERARLRPSTAADRCTAASPEQAQAEWRDMDDADGDGERGLEVEPRM-NQQGVIRATTGGDVADL------------DGPAGGD-----GGWMRRSGSXXXXXXXXXX--------QPLLVSLADLTTAGLQKLLQAEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTSSMGSTS 404          
BLAST of mRNA_C-linearis_contig10.496.1 vs. uniprot
Match: D7FZY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY2_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 9.350e-54
Identity = 249/697 (35.72%), Postives = 277/697 (39.74%), Query Frame = 0
Query:    5 LFVQVIDASGHLTAKGKHHRRSHSAPMGPPAMSSSPIPLSQQSSASGRLSPPRRRYIGSGLSFHQTVVQGPPSGHRRTASLTTELLLLPDGAGGRRCGSGGGRVSVLSGRPAESELRELQATEALHRPPLRRRSEQPPNARSQ---------------------TPPSLGVRRGPGVSTGGCTPPQHRSLSRSPQRSLRRTSKTQEAPGETTTTTAHCPQKGQPASSPAPALAPALSTRPSSDSMVGIADSPHMLPEGLKTDEEYYGGRRGCGSXXXXXXXXXXXXXXXXXXXXSGGQTELAGTVAGDGEAEADRPPSTCDSSVGGDNTTQVGSFHLPETGSSARGPAGI-HPGAEEGAGVGMGNRXXXXXXXXXXXXXXXXXLEAESEAG-VTVVTAAETPAA---ATPALAASAGWGSXXXXXXXXXXXXXXXXXXXXXXCLLDAFREPEGNDWGELEDWQGLPGLQLAGXXXXXXATSPRLQVPALIFRSGTVDEGDVLSLHGQPRSRKPEAISPAKYG-GSERPH--PHPTRRPXXXXXXXXXXXXXXXXXXXXXESERARVGPRMMGRPRPIRTTAAXXXXXXXXXXFLGFDGYDDGESGTSPGEDVGGWIGRTGXXXXXXXXXXXXXXXXXXGQPLLLSLADLTTAGLQKLLKAEGGSKMFFDPDSQRWVGEEVDLSGFEDPKSSSMGSAS 672
            +++  IDA G LT KGK HRRS SAP+GPP+                           SG S  Q                                                     LQ  EAL RPPLR R+E   NAR                       TPP LG   G G   GG T    RS  RSPQ  L                                       +R S D+         MLPEGLKTDEE + GRR                            T +A    G+G A     P+     V  D +  VG     E G+         +PG  E                            A++E G VTVV   E PAA   A  A AA  G G                        LLDA+REPEGNDWGELEDW GLPGLQLA          P L+VP+LIFR GTVDEGDVLSLHG+PRSRKPEA SPAKYG G ER    P                           + ER  V    M +   IR T                    DG +G S     GGW+         XXXXXXXXXXXXX QPLLLSLADLTTAGLQKLL+AEGGSKMFFDPDSQRWVGEEVDLSGFEDP +SS+GS S
Sbjct:    7 VWINTIDAKGRLTMKGKAHRRSQSAPLGPPSXXXXXXXXXXXXXXXXXXXX-XXXXXXSGFSCPQIXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXAGLQDEEALPRPPLRLRAEPRYNARRTVDSRESDSSSSPCSHRGGRPLTPPGLGSGAGDG-GVGG-TGVNFRSPPRSPQTRLH--------------------------------------SRGSRDAK--------MLPEGLKTDEEDHSGRRAA--------------------------TAVAAAPKGEGVA-----PTGASGPVPPDQSRAVGGAATGEAGAGREAVGDYDNPGGSE----------------------------AKAEGGLVTVVAGEEVPAAPKFAGRAEAAEQGAGDGRIGGS-----------------LLDAYREPEGNDWGELEDWHGLPGLQLANAGDEV----PTLKVPSLIFRPGTVDEGDVLSLHGRPRSRKPEASSPAKYGSGEERARLCPSAPADTCTAASPGQTQAERRDMDDEDGDGERGLVVEPRMNQHGVIRATTGGRVADL------------DGPAGGS-----GGWM--------RXXXXXXXXXXXXXXQPLLLSLADLTTAGLQKLLQAEGGSKMFFDPDSQRWVGEEVDLSGFEDPNTSSIGSTS 535          
BLAST of mRNA_C-linearis_contig10.496.1 vs. uniprot
Match: A0A836CHZ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.150e-5
Identity = 29/50 (58.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:  615 QPLLLSLADLTTAGLQKLLKAEGGSKMFFDPDSQRWVG---EEVDLSGFE 661
            +P+L+SLAD+T AGL+KLL+A G ++M+FD  +QRWVG   + VD+SGFE
Sbjct:  408 EPILVSLADVTAAGLEKLLEAGGDTQMYFDSVAQRWVGGAADRVDMSGFE 457          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KL36_9PHAE1.690e-5745.38Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZY2_ECTSI9.350e-5435.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CHZ5_9STRA1.150e-558.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1457162..1465598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.496.1mRNA_C-linearis_contig10.496.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1457162..1465761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.496.1 ID=prot_C-linearis_contig10.496.1|Name=mRNA_C-linearis_contig10.496.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=672bp
MDDALFVQVIDASGHLTAKGKHHRRSHSAPMGPPAMSSSPIPLSQQSSAS
GRLSPPRRRYIGSGLSFHQTVVQGPPSGHRRTASLTTELLLLPDGAGGRR
CGSGGGRVSVLSGRPAESELRELQATEALHRPPLRRRSEQPPNARSQTPP
SLGVRRGPGVSTGGCTPPQHRSLSRSPQRSLRRTSKTQEAPGETTTTTAH
CPQKGQPASSPAPALAPALSTRPSSDSMVGIADSPHMLPEGLKTDEEYYG
GRRGCGSGGGGIGIGIDFAAAAAVAAASGGQTELAGTVAGDGEAEADRPP
STCDSSVGGDNTTQVGSFHLPETGSSARGPAGIHPGAEEGAGVGMGNRAR
GGGGGGGGGGGGGDALEAESEAGVTVVTAAETPAAATPALAASAGWGSSG
GSTAGRAAEEQAGGGGGGGGCLLDAFREPEGNDWGELEDWQGLPGLQLAG
GGGGGGATSPRLQVPALIFRSGTVDEGDVLSLHGQPRSRKPEAISPAKYG
GSERPHPHPTRRPPPAAGGVVQPMDFSSGGGGGEESERARVGPRMMGRPR
PIRTTAAAAGGGGGGGGFLGFDGYDDGESGTSPGEDVGGWIGRTGGGSGG
ISIGGSSGGGAGAGQPLLLSLADLTTAGLQKLLKAEGGSKMFFDPDSQRW
VGEEVDLSGFEDPKSSSMGSAS
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