prot_C-linearis_contig10.495.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.495.1
Unique Nameprot_C-linearis_contig10.495.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length807
Homology
BLAST of mRNA_C-linearis_contig10.495.1 vs. uniprot
Match: D7FZY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY2_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 6.810e-150
Identity = 359/651 (55.15%), Postives = 408/651 (62.67%), Query Frame = 0
Query:   43 NAHRRWSSGEGIY--SSRRPSTVLGGSRMASGPXXXXXXXXXXXRLGHSRRHSVSGPTRGVPTGGSGGGVRLEGSGDGGVCRPSSARKXXXXXXXXXXXXXHIKPGSMASSVTSSAGLRSESDTGSVVRLWEDGDRRQVQDGGWGGAGGLSRRVEEALLRASESPGASAADLAAXXXXXXXXXXSGSGRKGLVVGGDQLTKTRLAQVFEGAAYASSDGRLSRASLASSSRQNASPPLGGGSL-------DHRAWVPVRTESSPPLGLE--HSLASGSELGASETSDWDQDIDFECLPDNQPFNLTLEQPTKFGYSPGLALDSGEVEGDGGPANPRAS-VSHPQSDSDWPPPAERPELFRHQTAPATTATAAALGHGEAG-AFMGWPLKTS---ADEREGXXXXXXXAYMPGHQKGG-YKDSRADSLGSAAEWDRTLEGEIDVSLAQRPRTPVAPGQPFGKARFSA--TKGAAPRPTSRLDRKSSPNLMVGKLAAEASGXXXXXXXXXXXXXXXXXXXXPPRSAVGIAWDAFKRNGGGDSLTATVKAAVTTATTIAVEHVRKRTRERLLLEKGAGGVGKRLSGPVQITLEDLQASPSPDRMSLGAAVEEAGGQPAKSP-APAAGGARFNRGKMCWEGFEEPDLTGFATTDSE 673
            NAHRRWSSGEG+Y  SSRRPS VL       G            +  H RRHSVS P+R  P+  + GG+RLEGSGDGGV RP+S+                 +P SM SS     G+ SESDTGSVVRL +      V+DGG  G G  +RR + A   AS++   S      XXXXXXXXXX    RK LVVGGD     RLAQVFEGAAYASS+GR   AS++SSSR+NASPPLG           +  AW   R  +SPPLG     SLASGSE+ ASETSDWDQD DFE LP++Q FNLTLE+PTKFGYSPGLA+               AS ++ P  D DW PPA  P+L R QTAPA T  +++LGH EAG AF  WP K     A + +G       A   GHQ+ G Y D RADSLGSAAEWDRTLEGE+D+SLAQR +TPV  G    K   +A    G  PRP +R   KS P  +  K  AEASG                     PRSAVGIAW+AFK NGGGDSL AT+ AA+T AT+IAVEHVRKRTRERLLLEKGAG  GKRLSGPVQITLEDLQ SPSPDRMSLGA  E+AG   + SP + AA GARFNR KMCWEGFEEPDLTGF TTDSE
Sbjct:  590 NAHRRWSSGEGLYGPSSRRPSIVLEERGETVGGGGSGSDGVQRRKELHQRRHSVSVPSRIPPS--ASGGLRLEGSGDGGVLRPTSSASENRRAKGRV----RSRPASMVSS-----GISSESDTGSVVRLSDAAAPGHVRDGG--GWGNTARRFDSAFGFASDT---SXXXXXXXXXXXXXXXXXXLRRKDLVVGGDHQ---RLAQVFEGAAYASSEGR---ASMSSSSRRNASPPLGXXXXXXXXXXXEMLAWATPRAGASPPLGGVGGSSLASGSEIEASETSDWDQDADFEGLPEDQAFNLTLEEPTKFGYSPGLAVAGXXXXXXXXXXXXXASNIASPIPDGDWLPPAA-PDLLRRQTAPAMTPPSSSLGHVEAGGAFTRWPPKAPPAHASDGDGAEESGDGAKNRGHQRSGTYTDLRADSLGSAAEWDRTLEGELDLSLAQRNQTPVMVGPSLKKFPVAAGNVSGTVPRPKARRGGKSLPGRVPSK-PAEASGCRGGGGAAGAIKIKS------PRSAVGIAWEAFKANGGGDSLPATLSAAMT-ATSIAVEHVRKRTRERLLLEKGAGA-GKRLSGPVQITLEDLQTSPSPDRMSLGAGGEDAGSAKSISPGSTAAAGARFNRRKMCWEGFEEPDLTGFDTTDSE 1208          
BLAST of mRNA_C-linearis_contig10.495.1 vs. uniprot
Match: A0A6H5KL36_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL36_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 2.320e-137
Identity = 338/656 (51.52%), Postives = 390/656 (59.45%), Query Frame = 0
Query:   43 NAHRRWSSGEGIY--SSRRPSTVLGGSRMASGPXXXXXXXXXXXRLGHSRRHSVSGPTRGVPTGGSGGGVRLEGSGDGGVCRPSSARKXXXXXXXXXXXXXHIKPGSMASSVTSSAGLRSESDTGSVVRLWEDGDRRQVQDGG-WGGAGGLSRRVEEALLRASESPGASAADLAAXXXXXXXXXXSGSGRKGLVVGGDQLTKTRLAQVFEGAAYASSDGRLSRASLASSSRQNASPPLGG-------GSLDHRAWVPVRTESSPPLGLE--HSLASGSELGASETSDWDQDIDFECLPDNQPFNLTLEQPTKFGYSPGLALDSGEVEGDGGPANPRAS-VSHPQSDSDWPPPAERPELFRHQTAPATTATAAALGH-GEAGAFMGWPLKTS---ADEREGXXXXXXXAYMPGHQKGG-YKDSRADSLGSAAEWDRTLEGEIDVSLAQRPRTPVAPGQPFGKARFSA--TKGAAPRPTSRLDRKSSPNLMVGKLAAEASGXXXXXXXXXXXXXXXXXXXXPPRSAVGIAWDAFKRNGGGDSLTATVKAAVTTATTIAVEHVRKRTRERLLLEKGAGGVGKRLSGPVQITLEDLQASPSPDRMSLGAAVEEAGGQPAKSP-APAAGGARFNRGKMCWE----GFEEPDLTGFATTDSE 673
            NAHRRWSSGEG+Y  SSRRPS VL G   A G            +  H RRHSVS P+R +P   SGG +RLEGSGDG V R +S+                 +PGSM SS     G+ SESDTGSVVRL +      ++DGG WG     +RR + A   AS++          XXX           RK LV GG+     RLAQVFEGAAYASS+G +S   ++SSSR+NASPPLG        GSL+   W   R  +SPPLG     SLASGSE+ ASETSDWDQD DFE LP++Q F LTLE+PTKFGYSPG+A+  G               ++ P  D +W PPA  P L R QTAPA T  +++LGH    GAF  WP K +   A +          A   GHQ+ G Y D RADSLGSAAEWD TLEGE+D+SLAQR +TPV  G    K   SA    G  PRP +R D KS P  +  K  AEAS                      P SAV IAW+AFK NGGGDSL AT+ AA+T AT+IAV+HV KRTRERLLLEKGAG  GKRLSGPVQITLEDLQ SPSPDR+SLG   E+AG   + SP A AA GARFNR KMCWE    GFEEPDLTGF TTDSE
Sbjct:  458 NAHRRWSSGEGLYRPSSRRPSIVLEGRGEAVGGGGSGSDGVQRRKELHQRRHSVSVPSR-IPLSASGG-LRLEGSGDGEVLRSTSSASENRRANGRG----RSRPGSMVSS-----GISSESDTGSVVRLSDAAAPGHLRDGGRWGST---ARRFDSAFGVASDTSXXXXXXXXXXXXPPLR-------RKDLVFGGNHQ---RLAQVFEGAAYASSEGHIS---MSSSSRRNASPPLGNSSPPPGVGSLEMLTWATPRPGASPPLGGVGGSSLASGSEIEASETSDWDQDADFEGLPEDQAFKLTLEEPTKFGYSPGVAVAGGSXXXXXXXXXXXXXXIASPIPDGNWLPPAA-PALLRRQTAPARTPPSSSLGHMNVGGAFTSWPPKATPAHASDEAVAEESGVGAKNRGHQRSGTYTDLRADSLGSAAEWDWTLEGELDLSLAQRSQTPVMVGPSLKKFTVSAGNVSGTVPRPQARRDGKSLPGRVPSK-PAEASDCRGGGAAAGATKIKS------PHSAVRIAWEAFKANGGGDSLPATLSAAMT-ATSIAVKHVSKRTRERLLLEKGAGA-GKRLSGPVQITLEDLQTSPSPDRVSLGEGGEDAGCAKSISPGATAAAGARFNRQKMCWEASTTGFEEPDLTGFDTTDSE 1076          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZY2_ECTSI6.810e-15055.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL36_9PHAE2.320e-13751.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1452222..1457113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.495.1mRNA_C-linearis_contig10.495.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1452221..1457113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.495.1 ID=prot_C-linearis_contig10.495.1|Name=mRNA_C-linearis_contig10.495.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=807bp
GASSASPRRSNSKSPARISFSRSPRFGHGSGAAAAAAAAAPANAHRRWSS
GEGIYSSRRPSTVLGGSRMASGPPETSGGGGGRRRLGHSRRHSVSGPTRG
VPTGGSGGGVRLEGSGDGGVCRPSSARKPPPPQQQQQQQQQHIKPGSMAS
SVTSSAGLRSESDTGSVVRLWEDGDRRQVQDGGWGGAGGLSRRVEEALLR
ASESPGASAADLAAAAGGGGSASGSGSGRKGLVVGGDQLTKTRLAQVFEG
AAYASSDGRLSRASLASSSRQNASPPLGGGSLDHRAWVPVRTESSPPLGL
EHSLASGSELGASETSDWDQDIDFECLPDNQPFNLTLEQPTKFGYSPGLA
LDSGEVEGDGGPANPRASVSHPQSDSDWPPPAERPELFRHQTAPATTATA
AALGHGEAGAFMGWPLKTSADEREGGGGGGGGAYMPGHQKGGYKDSRADS
LGSAAEWDRTLEGEIDVSLAQRPRTPVAPGQPFGKARFSATKGAAPRPTS
RLDRKSSPNLMVGKLAAEASGGGGGEGGAATSTTSQSQSSSPPRSAVGIA
WDAFKRNGGGDSLTATVKAAVTTATTIAVEHVRKRTRERLLLEKGAGGVG
KRLSGPVQITLEDLQASPSPDRMSLGAAVEEAGGQPAKSPAPAAGGARFN
RGKMCWEGFEEPDLTGFATTDSESESASRSRCSGSGQSRARPRSRSHSPS
PSCSPSPSRSRTPSPSPFGAAIAVAIAEGVEESPSRPASPEGAVSLSPAG
GEEGGDVRAAGGVVVGGDAGGTARPATGEQDGVGVRTGGVVVERPEASGV
GFGVSGG
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