prot_C-linearis_contig10.482.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.482.1
Unique Nameprot_C-linearis_contig10.482.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1553
Homology
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: D7FZZ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ9_ECTSI)

HSP 1 Score: 518 bits (1334), Expect = 9.140e-165
Identity = 286/444 (64.41%), Postives = 331/444 (74.55%), Query Frame = 0
Query:   14 PTDEDEYQPDGAAESNNESQLGVWEGRVWDGNDGEVFIPWPEEESQAMKTSPEADVANVERLETPEEEEEEPFTPDDPVIVREQNLRALLVLLPAKIMKDVVKAAMQGAMLHTKRTATAEAERRRRSLLSSKAQFRHTTARS----PKVEDGGTMGDEMDLPSDADREAVETTNTPGSWRNTTTQERDTIVGDKLQEVLRVLYSTSKEEARLTMRAIYLSSQGIGAAGASQLAPALKSCVVVALHLGNNAMGDKGITALVDGLRHARGLQKLHLNDNEASTITDVGCRRLANALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSLAGCLDVPPAAWKTITVRDREGMAWEPPRPGDDGAVSLAAALMCPHGCPLRRLRMANAGMKSIGAKAIAAALCANHTLETIDLSGNNFGCKADDNSWESASELLSFGLQVN 453
            P   DE QP    E ++++ L   EG+VWDG DGEVF+PWP+EE   M+ SP+A VA+ + LET E ++EEPFTPDDP +VREQNLRALLVLLPAK+M  V+KAAM+GAMLHT+RTATA+AE+RRR LLSS+AQFRHT  ++     K +DG    DE +    A+ E V++  TP S RNTTTQERDTIVG KLQEVLRVLYSTS EEAR+TMRAIYLSSQGIGAAGA QLAPALK CV+VALHLGNNA+GDKG+ +L DGLRHARGLQKL                                           LSLA YLSQ GCPLRSLSLAGCLDV PAAWKTI VR +EGM W+PPRPGDDGAVSLAAAL+ PHGCPLRRLRMANAGMK+IGAKAIA ALCAN TLET+D+SGN+FG   D ++WESA++LLSFGLQ +
Sbjct:   64 PASVDEAQPTAVGEFSHDNSLEPLEGQVWDGVDGEVFVPWPDEE---MRASPDAVVAHNKALETTEGDDEEPFTPDDPAVVREQNLRALLVLLPAKLMNGVIKAAMEGAMLHTRRTATADAEKRRRLLLSSRAQFRHTAKKNCQGDMKHKDGDGFDDETEEGPTAEGETVDSAETPDSRRNTTTQERDTIVGHKLQEVLRVLYSTSTEEARVTMRAIYLSSQGIGAAGAQQLAPALKDCVIVALHLGNNALGDKGLCSLADGLRHARGLQKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LSLAIYLSQQGCPLRSLSLAGCLDVDPAAWKTINVRGKEGMRWDPPRPGDDGAVSLAAALISPHGCPLRRLRMANAGMKTIGAKAIATALCANRTLETVDVSGNDFGSTTDASAWESAADLLSFGLQAS 501          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: A0A6H5KJE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE5_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 8.730e-69
Identity = 134/179 (74.86%), Postives = 152/179 (84.92%), Query Frame = 0
Query: 1374 LLRGSGEEDEEGNAILPEIDDRFLTVGQRLRRLRDAREGVQREKQRAYLEYSRQVKRNIRARKRFILAEKRAGRIAQLMDTQQLVEGLKERGYSTEGSEDLDQLRRVFVEGIKPEMRVRLHATSRWTKSRNKLRERTNDAVKIGEIVARRQRLLLSMGAAQPVFAQRGVGHGVRHAATM 1552
            +LRGSGEEDEEGN ILPEIDDRFLTVGQRLRRLRDAR+ ++REKQRA+LEYSRQVK N+R RKRF+LAEKRAGRIA+ MDT+QLVE LKERGY+T+GSE LDQLRRVF+EGI+PE+RVRLHATSRWTKSRNK RERT D V++GEIVARRQ+L  S     P          VRHAAT+
Sbjct:    1 MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARDNLEREKQRAHLEYSRQVKSNLRERKRFVLAEKRAGRIAKSMDTKQLVEALKERGYATKGSEQLDQLRRVFIEGIQPEIRVRLHATSRWTKSRNKHRERT-DTVEVGEIVARRQQLTSSKRVT-PFSPSPITRLNVRHAATV 177          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: D7FZZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ8_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.500e-13
Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = 0
Query: 1377 GSGEEDEEGNAILPEIDDRFLTVGQRLRRLRDAREGVQREKQRAYLEY 1424
            GSGEEDEEGN ILPEIDDRFLTVGQRLRRLRDAR+ +QREK RA+++Y
Sbjct:  190 GSGEEDEEGNRILPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHMKY 237          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: UPI0007A6E2E8 (ribonuclease inhibitor n=1 Tax=Miniopterus natalensis TaxID=291302 RepID=UPI0007A6E2E8)

HSP 1 Score: 69.7 bits (169), Expect = 2.540e-8
Identity = 61/181 (33.70%), Postives = 78/181 (43.09%), Query Frame = 0
Query:  253 LHLGNNAMGDKGITALVDGLRHARG-LQKLHLNDNEASTITDVGCRRLANALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSLAGC----LDVPPAAWKTITVRDREGMAWEPPRPGDDGAVSLAAALMCPHGCPLRRLRMANAGMKSIGAKAIAAALCANHTLETIDLSGN 428
            L LGNN +GD GIT L  GL      L+ L L + +   IT  GCR L   L   + L  L L  N  G++    L   L QP C L SL +  C       P         R  + +       GD G   L   L  P G  LR L + +  +   G  ++AA L ANH+L  +DLS N
Sbjct:  236 LELGNNKLGDAGITELCPGLLSPSSRLKTLWLWECD---ITVSGCRDLCRVLRAKESLKELSLAGNAVGNEGIQLLCESLVQPSCQLESLWVKSCSLTAACCPRVGAMLAQNRSLQELQMSSNNLGDVGVEELCQGLRQP-GTTLRALWLGDCEVTDQGCHSLAALLLANHSLRELDLSNN 412          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: UPI0018F73B25 (NACHT, LRR and PYD domains-containing protein 3-like isoform X1 n=4 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F73B25)

HSP 1 Score: 69.7 bits (169), Expect = 4.800e-8
Identity = 63/215 (29.30%), Postives = 98/215 (45.58%), Query Frame = 0
Query:  222 TMRAIYLSSQGIGAAGASQLAPALKSCVVVALHLGNNAMGDKGITALVDGLRHAR-GLQKLHLNDNEASTITDVGCRRLANALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSLAGCLDVPPAAWKTITVRDREGMAWE----PPRPGDDGAVSLAAALMCPHGCPLRRLRMANAGMKSIGAKAIAAALCANHTLETIDLSGNNFG 431
            T++ + L +  I   G  +L P L  C V  L LGNN +GD G+  L   LR+    +QKL LN N   T+TD   + LA  L+  ++L  LDL +N  GD    +L+  L    C L+ L L   +     A    ++        E      + GD G   L+ AL  P  C +++L +    +    A+ + + L  N +L  ++L+ N  G
Sbjct:  705 TIKELDLENCCIQCEGLQRLGPILHKCQV--LRLGNNKLGDPGVKLLSVALRNPDCKIQKLGLNSN---TLTDSCTQDLALLLSANRLLKDLDLGNNKLGDSGVTALSVALRDLACKLQKLELYENILTDSCAQDLASILSTNQSLMELNLGNNKLGDSGVKLLSVALRTPD-CKIQKLLLYKNHVSHSCAEDLVSVLSTNRSLTVLNLNNNKLG 913          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: H0WCD9_CAVPO (NLR family pyrin domain containing 3 n=1 Tax=Cavia porcellus TaxID=10141 RepID=H0WCD9_CAVPO)

HSP 1 Score: 65.5 bits (158), Expect = 9.450e-7
Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 0
Query:  222 TMRAIYLSSQGIGAAGASQLAPALK-SCVVVALHLGNNAMGDKGITALVDGLRHARG-LQKLHLNDNEASTITDVGCRRLANALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSLAGCLDVPPAAWKTITV 359
            T+  ++L S G+ +A    LA  L  SC +  L++G NA+GD G++ L    +     LQKL L +   S +T +GC  LA+ L   + L+ L L  N  GD     L   L  PGC LR L L  C     + W   TV
Sbjct:  809 TLNKLWLVSCGLTSACCEDLASVLSTSCSLTRLYIGENALGDTGVSTLCGKAQWQESHLQKLGLVN---SGLTFMGCSALASVLRTTRSLTHLYLRGNALGDAGLKLLCEGLLHPGCELRMLELDNCSLTSHSCWDLSTV 945          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: UPI001B34E47E (NACHT, LRR and PYD domains-containing protein 3 n=5 Tax=Ochotona TaxID=9977 RepID=UPI001B34E47E)

HSP 1 Score: 64.3 bits (155), Expect = 2.140e-6
Identity = 51/148 (34.46%), Postives = 70/148 (47.30%), Query Frame = 0
Query:  253 LHLGNNAMGDKGITALVDGLRHAR-GLQKLHLNDNEASTITDVGCRRLANALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSLAGCLDVPPAAWKTITV----RDREGMAWEPPRPGDDGAVSLAAALMCPHGCPLRRL 395
            L+LG NA+GD G++ L D L+H +  L+KL L    +S +T V C  ++ AL   K L+ L L  N  GD     L   L  P C L+ L L  C       W    +    R  + ++      GD G + L   L  P GCPL+RL
Sbjct:  860 LYLGENALGDDGVSLLCDKLKHPQCSLRKLGL---VSSGLTSVCCAAISAALGSSKSLTHLYLRGNALGDNGLKLLCQGLLHPSCRLQMLELDSCSLSSHCCWDLCRLLTSNRSLQKLSLGSNDLGDLGVMMLCEVLRQP-GCPLQRL 1003          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: UPI001CFE1C66 (NACHT, LRR and PYD domains-containing protein 12-like n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFE1C66)

HSP 1 Score: 59.7 bits (143), Expect = 5.590e-5
Identity = 70/242 (28.93%), Postives = 102/242 (42.15%), Query Frame = 0
Query:  250 VVALHLGNNAMGDKGITALVDGLRHAR-GLQKLHLN----DNEASTITDVGCRRLANALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSLAGCLDVPPAAWKTITVRDREGMAWEPPRP----GDDGAVSLAAALMCPHGCPLRRLRMANAGMKSIGAKAIAAALCANHTLETIDLSGNNFGCKADDNSWESASELLSFGLQ-VNRTVHTIVLRACGLR----REQVFAIQAN 477
            ++ L L  N +G  G+  L +GLRH +  LQ L L     D EA       C+ L+  L+  + L+ LDL  N  GD     L   LS   C L++L L  C   P A     +V        E        GD G  SL   L C     L+ LR+    +  +  +A++  L +N  L+ +D+S N+          +    LL  GLQ  N  +H + L +C L     R+   A+ AN
Sbjct:  784 LIRLDLSRNILGATGVRLLCEGLRHPKCRLQMLQLRRCQVDGEA-------CQELSKVLSTSQHLTELDLTGNALGDLGLQFLCPGLSHSACKLQTLWLKICHLTPAACQNLSSVLSTSQNLTELDLSLNDLGDAGVKSLCEGL-CHSKSQLQTLRLGICRLTFVSCEALSTTLQSNVHLKALDVSFNDLE--------DMGVHLLCEGLQHPNCKLHKLWLDSCCLSGAACRDLASALGAN 1009          
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Match: UPI00051B6139 (LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like n=1 Tax=Fulmarus glacialis TaxID=30455 RepID=UPI00051B6139)

HSP 1 Score: 59.3 bits (142), Expect = 6.850e-5
Identity = 56/189 (29.63%), Postives = 83/189 (43.92%), Query Frame = 0
Query:  253 LHLGNNAMGDKGITALVDGLRH-ARGLQKLHLNDNEASTITDVGCRRLANALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSL-------AGCLDVPPAAWKTITVRDREGMAWEPPRPGDDGAVSLAAALMCPHGCPLRRLRMANAGMKSIGAKAIAAALCANHTLETIDLSGNNFGCK 433
            L L    +GD G+  L +GL+H A  L++L L    A  +T  GC  L   L+  + L  LD+  N  GD     L   L  P C L  L L        GC D+  A   ++++R+ +    +    GD G   L   L  P  C L  L + +  + S G   +A  L A+ +L  +DL  N+ G +
Sbjct:  530 LDLXKTGVGDTGVRLLCEGLKHPACLLERLRL---WACELTSAGCEDLGAVLSTNQRLRDLDIGDNKLGDAGVPXLCEGLKHPTCQLEKLRLQYCQLTSTGCGDLATALGTSLSLRELDLGDNDF---GDAGVRLLFEGLKQPT-CRLEILGLQHCQITSTGCGDLATVLSASPSLRELDLGNNDVGVR 711          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FZZ9_ECTSI9.140e-16564.41Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KJE5_9PHAE8.730e-6974.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZZ8_ECTSI5.500e-1383.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0007A6E2E82.540e-833.70ribonuclease inhibitor n=1 Tax=Miniopterus natalen... [more]
UPI0018F73B254.800e-829.30NACHT, LRR and PYD domains-containing protein 3-li... [more]
H0WCD9_CAVPO9.450e-735.00NLR family pyrin domain containing 3 n=1 Tax=Cavia... [more]
UPI001B34E47E2.140e-634.46NACHT, LRR and PYD domains-containing protein 3 n=... [more]
UPI001CFE1C665.590e-528.93NACHT, LRR and PYD domains-containing protein 12-l... [more]
UPI00051B61396.850e-529.63LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1030..1057
NoneNo IPR availableCOILSCoilCoilcoord: 1285..1305
NoneNo IPR availableCOILSCoilCoilcoord: 1403..1423
NoneNo IPR availableCOILSCoilCoilcoord: 862..889
NoneNo IPR availableCOILSCoilCoilcoord: 967..994
NoneNo IPR availableCOILSCoilCoilcoord: 1085..1105
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 306..333
e-value: 1.4
score: 16.2
coord: 275..305
e-value: 2.1
score: 14.9
coord: 248..274
e-value: 0.25
score: 20.4
coord: 220..247
e-value: 1.9
score: 15.2
coord: 417..448
e-value: 7.1
score: 11.1
coord: 389..416
e-value: 29.0
score: 6.8
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 373..433
coord: 204..346
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 224..470
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 199..363
e-value: 1.0E-24
score: 88.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 370..483
e-value: 1.3E-12
score: 48.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1128984..1143829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.482.1mRNA_C-linearis_contig10.482.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1128885..1143909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.482.1 ID=prot_C-linearis_contig10.482.1|Name=mRNA_C-linearis_contig10.482.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1553bp
MEVTTPIDEDPAYPTDEDEYQPDGAAESNNESQLGVWEGRVWDGNDGEVF
IPWPEEESQAMKTSPEADVANVERLETPEEEEEEPFTPDDPVIVREQNLR
ALLVLLPAKIMKDVVKAAMQGAMLHTKRTATAEAERRRRSLLSSKAQFRH
TTARSPKVEDGGTMGDEMDLPSDADREAVETTNTPGSWRNTTTQERDTIV
GDKLQEVLRVLYSTSKEEARLTMRAIYLSSQGIGAAGASQLAPALKSCVV
VALHLGNNAMGDKGITALVDGLRHARGLQKLHLNDNEASTITDVGCRRLA
NALAPLKVLSTLDLCHNPFGDKACLSLATYLSQPGCPLRSLSLAGCLDVP
PAAWKTITVRDREGMAWEPPRPGDDGAVSLAAALMCPHGCPLRRLRMANA
GMKSIGAKAIAAALCANHTLETIDLSGNNFGCKADDNSWESASELLSFGL
QVNRTVHTIVLRACGLRREQVFAIQANTVAQTTGAGKIHHERREGEKPPS
EFGGGADQAGEGVGANGDPLPWREEKRLGFRAACLRDWLLDAARVKGMRY
PRPQSPDEGERASLAKRTPAGGQNKNEFSPTATPENSNQSEDQGHLAVDR
QLRTGLAALQGVLTSYEAGEPLQRGLGGAGGFAASTSRDNSRDRDEPLPS
QGLETGRDTFEANSADKASDHNGRQRPSPQGGTEALTAVPDITRLTINGN
SENEGGQVSESPTKSTAQPSVPASSRSRESSSSGSTGGAQTRSSSNEGSL
SAEASNSGRIGHCGIRSSQSKRASGSTVNSNEADGNILTHWEASDGIKDG
RRAPVTETPDEDGGRARKGERGEEVNISPVRCQREGLPVRAMNLEAAAQE
GWRLAALAATACEDLNEKEATLQRENRSLDQKRDELAQRTLGEVSMLEKY
LVDAGAARDVASDSVRRLEPIVAAARTSEREWRLTLGRREHGPREPSADV
VSMEQLEVEWSERSQHVQALAEDLQEAQRHQEVAQRRIEELKMGERSLQS
RTIEYDITFREKSAQTSASVAGVRTRRAVMRRTESTLRALAAKLDHLEEV
AREEEALRTLVPAGSERRDLDLQVADAVRLSSAVAREVEETRLKREEAAA
RLEQARWGTAATKSRWGLEVSAAAEPVTRPKTAPTLSSSKSTSKQTKQEG
NFSSRTVSGGGAIHQTPQIYAVPPALNIECFFLGATKETPTCCSMAGTGT
AYKAANDGRPGEMEEAARLESTEAEVRQARPPFRYRPHSQVTGLSFSIPS
LRSHCCLLGSPIYIGERQTAMPLTLPSPSLHATHLGAAKQNLRRLSEDYA
KADRDFVDAVARGETAPVTRALVLIRDHGDILRVKEKDTPEDAKNVILVQ
GRGEMSLLGVELNAQIALGARIALLRGSGEEDEEGNAILPEIDDRFLTVG
QRLRRLRDAREGVQREKQRAYLEYSRQVKRNIRARKRFILAEKRAGRIAQ
LMDTQQLVEGLKERGYSTEGSEDLDQLRRVFVEGIKPEMRVRLHATSRWT
KSRNKLRERTNDAVKIGEIVARRQRLLLSMGAAQPVFAQRGVGHGVRHAA
TM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf