prot_C-linearis_contig10.476.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig10.476.1
Unique Name	prot_C-linearis_contig10.476.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	432

Homology

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: D7G013_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G013_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 4.820e-75
Identity = 162/304 (53.29%), Postives = 188/304 (61.84%), Query Frame = 0

Query:  131 MSSSGDAVRFLLRRDSSTLEAEDRDGRTALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPGMFRDMLKIILQLLAAAPADKVWRRRGWLLMLRSRQLEEVGPGTQSSIVVEQGFDIERGVCAGVFADGGAVSWRHSM--DQEEGNRHSSNGSSRGSSGRPRKVGKAGSTARXXXXXXXXXXXXXDGALVARERSNNCCLERNGER-GTFRPGKVGGGEACHDGGGEGHQQLRAAVERVVGVCEDGVFRNIVAFL 431
            MS SG AVRFLL RD S+LEA D DGRTALHLASGHRLGSD TL AL+E+  NIEA+T L ETPLH+ACKALRVSAV+Q+LRFGA+D AVD  GRTP+A+T+ LL SQ PGMFRDML+ IL LL AAP D+VWRRRGWLLMLR      VG    SS   E G   E+GV AG  A          +   ++E   H +         RPRKVGKAG  A                A   RE+ +  C +   E  G +        E+C D  G G ++LR+ VER V V EDGVFRNIVAFL
Sbjct:    1 MSGSGAAVRFLLDRDISSLEARDHDGRTALHLASGHRLGSDETLRALVESNGNIEARTFLGETPLHKACKALRVSAVEQLLRFGANDAAVDAEGRTPAAMTARLLLSQRPGMFRDMLQNILTLLEAAPGDRVWRRRGWLLMLR-----RVG----SSTATEPGSCHEKGVVAGARATPAGTRAIPGLFGAEKEAYEHKA---------RPRKVGKAGDAA--------VARATRKAAGGKREQHHPWCYQSTTEAAGVWSGVHSAAAESCRDEAG-GDRELRSVVERAVDVDEDGVFRNIVAFL 277

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.110e-25
Identity = 83/203 (40.89%), Postives = 111/203 (54.68%), Query Frame = 0

Query:   85 TDHLEMSPLHRAALGGHCDVMEELLSHGSS-LHSLAGNARTPLHAAAM-----SSSGDAVRFLLRRDSSTLEAEDRDGR-TALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPGMFRDMLKI------ILQLLAAAPADKVWRRRGWLLMLRS 274
            T+    SPL  AA GGH DV++ LL   SS L    G     LH AA+       +GDAVR LL   +   E  + D   T LH+A   R  SDGT+ ALLE G+NI A+  L +TPLH ACK   V+ V+ +LR+GAD+   +  G+TP+ +     Q+     F D  +       I ++L  APAD+ WRRRGWL++ RS
Sbjct:   79 TEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQND----FDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRS 277

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: D7G014_ECTSI (Ankyrin domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G014_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 2.400e-23
Identity = 86/128 (67.19%), Postives = 94/128 (73.44%), Query Frame = 0

Query:    1 MVKALVRAGAETDVEDENGDTPVHLAVFRGFEQVVEEXXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVRAILRGSRGNTLLLCHTDHLEMSPLHRAALGGHCDVMEELLSHGSSLHSLAGNARTPLHA 128
            MV+AL+ AGA+ D  D +                   XXXXXXXXXXXXXXXXXXXXXXSAHGSLGMV+AILRGSR + L  C TDHLEM PLHRAALGGHC+VM ELL  GSSLH+LAGNART LHA
Sbjct:  163 MVRALIGAGADLDTADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVKAILRGSRESNLP-CPTDHLEMPPLHRAALGGHCEVMSELLRQGSSLHTLAGNARTALHA 289

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 4.480e-22
Identity = 81/198 (40.91%), Postives = 106/198 (53.54%), Query Frame = 0

Query:   85 TDHLEMSPLHRAALGGHCDVMEELLSHGSSLHSLAGNAR-TPLHAAA-----MSSSGDAVRFLLRRDSSTLEAEDRDG-RTALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPGMFRDM-LKIILQLLAAAPADKVWRRRGWLLMLRS 274
            T+    SPL  AA  GH DV++ LL   SS    A +     LH  A     +   GDAVR LL   +        D   T LHLA    + S GT+ ALLE GANI A+T   +TPLH AC  LR S V+ +LR+GAD+   +  G TP+ +   L Q+      R+   + I ++LA APAD+ WRRRGWL++ RS
Sbjct:  241 TNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.170e-21
Identity = 101/291 (34.71%), Postives = 141/291 (48.45%), Query Frame = 0

Query:    3 KALVRAGAETDVEDENGDTPVHLAVFRGFEQVVEEXXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVRAILRGSRGNT-----LLLCHTDHL-----EMSPLHRAALGGHCDVMEELLSHGSS-LHSLAGNARTPLHAAA-----MSSSGDAVRFLLRRDSSTLEAEDRDG-RTALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPG--MFRDMLKIILQLLAAAPADKVWRRRGWLLMLRS 274
            +AL+  GA+ +V D    +P+HLA   G  +VV                 XXXXXXX        +  +L G+  +      LL    ++        SPL  AA  G  DV++ LL   S  + +  G     LH AA     +  +GDAVR LLR  +       +D   T+L+LA   R+ SDGT+ ALLE GANI A+    +TPLH AC       V+ +LR+GADD      G+TP+ +  AL Q       +  D  +I  ++LA  PA + WRRRGWL++ RS
Sbjct:  110 EALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIR-RMLARDPAARSWRRRGWLVLSRS 399

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: D8LP53_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP53_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.360e-15
Identity = 74/223 (33.18%), Postives = 113/223 (50.67%), Query Frame = 0

Query:   63 GSLGMVRAI-LRGSRGNTLLLCHTDHLEMSP-----LHRAALGGHCDVMEELLSHGSSLHSLAGNARTPLHAAAMSSSGDAVRFLLRRDSSTLEAEDRDGRTALHLASGHRLGSDGTLLALLEAGANIEAKTCLV-ETPLHEAC--KALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPGMFRDMLKIILQLLAAAPADKVWRRRGWLLMLRSRQ 276
            G+L +V+A+  +G   +     H  H ++ P     LH AA GGH DV+  LL +   + ++ GN  TPL   ++S +   V   L    +   AED+ G ++L  A+      D  LL LL  GA++  +  L   + LH AC  +    + V  +LR+GAD+  VD  GRTP    + L + +      +    + +LL  APAD+ WRRRGWL+ML  R+
Sbjct:  205 GNLPVVKALSTKGVDLDGTAEYHPSHSDIIPGQATALHAAAFGGHNDVVNFLLENSVRIDAVDGNMMTPL-ICSVSENHLCVSATLLEAGAAASAEDQTGTSSLSYAAASSSSVDMALL-LLRYGADVNTRCYLFGSSVLHNACTNRDNTEALVDLLLRWGADETVVDSSGRTPM---NHLTEDRFTRHSAETKDKVRKLLVNAPADRTWRRRGWLVMLCERE 422

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.640e-15
Identity = 57/141 (40.43%), Postives = 79/141 (56.03%), Query Frame = 0

Query:  135 GDAVRFLLRRDSSTLEAEDRDGR-TALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPGMFRDM-LKIILQLLAAAPADKVWRRRGWLLMLR 273
            GDAVR LL            D   T LH+A   R+ SDGT+ ALLE GA+++++    +TPLH ACK   VS V+ +LR+GAD+   +  G  P+ +  A  Q        D   + I ++L  APAD+ WRRRGWL++ R
Sbjct:   60 GDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLE-GADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSR 199

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 9.940e-15
Identity = 62/177 (35.03%), Postives = 84/177 (47.46%), Query Frame = 0

Query:  135 GDAVRFLLRRDSSTLEAEDRDGR--TALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQ---------CPGMFRDMLKII-------LQLLAAAPADKVWRRRGWLLMLRSRQLEEVGPGTQSSIVVEQG 293
            GD VR LL   +        DG   T LH A   R+   G + ALLE GAN+ A+    +TPLH AC    V+ V+ +L +GAD+   D  G TP+    A++ S+          PG  R   + I        Q+LA APAD+ W RR WL++ RS   +     T SS  +  G
Sbjct:   38 GDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAG---AIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSG 211

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BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.110e-14
Identity = 70/184 (38.04%), Postives = 94/184 (51.09%), Query Frame = 0

Query:   91 SPLHRAALGGHCDVMEELLSHGSSLHSLAGNARTPLHAAAMSSSGDAVRFLLRRDSST-LEAEDRDGRTALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPGMFRDMLKIILQLLAAAPADKVWRRRGWLLMLR 273
            SPL  AA GGH +V        ++LH  A      +   A+  +GDAVR LL   +   +EA +    T LHLA+ HR+ SDGT+ ALLE GANI A T   ETPLHEAC  L V+ V+ +L +GAD+   +  G TP+                D++             + WRRRGWL++ R
Sbjct:  166 SPLEVAANGGHGNV--------AALHCAA------VFVVAVRDNGDAVRALLGAGADVNVEATNNICFTPLHLAACHRIASDGTIRALLEGGANINACT-EDETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPA----------------DVI-----------GTRSWRRRGWLVLSR 307

[Close]

BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.860e-13
Identity = 69/186 (37.10%), Postives = 96/186 (51.61%), Query Frame = 0

Query:  103 DVMEELLSHGSSLHSLAGNARTPLHAAAMSSSGDAVRFLLRRDSST-LEAEDRDGRTALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACKA---LRVSAVQQVLRFGADDGAVDRGGRTPSALTSAL---LQSQCPGMFRDM--LKIILQLLAAAPADKVWRRRGWLLMLRSRQLEE 279
            DVM+ LL HG  ++ +  +   PLH AA  +S   +  LL   +   ++    DGRT+LH A+    G++  LLALL  GAN+   T    T LH   +         V  +LR GA + AVDR G+ P  L   +    QS  P    +   L+  ++LLA APAD+ WRRR WL+MLR R  +E
Sbjct:  238 DVMKALLEHGVDVN-VGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAA--ETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKE 420

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G013_ECTSI	4.820e-75	53.29	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LQI9_ECTSI	1.110e-25	40.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G014_ECTSI	2.400e-23	67.19	Ankyrin domain protein n=2 Tax=Ectocarpus TaxID=28...	[more]
D8LQN0_ECTSI	4.480e-22	40.91	Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo...	[more]
A0A6H5L812_9PHAE	2.170e-21	34.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LP53_ECTSI	1.360e-15	33.18	EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
A0A6H5JXF0_9PHAE	5.640e-15	40.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K6K9_9PHAE	9.940e-15	35.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JHD6_9PHAE	1.110e-14	38.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FXA8_ECTSI	2.860e-13	37.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 173..187 score: 35.79 coord: 52..67 score: 39.86
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 51..81 e-value: 0.37 score: 19.9 coord: 18..47 e-value: 0.001 score: 28.4 coord: 88..117 e-value: 0.018 score: 24.2 coord: 121..151 e-value: 3.2 score: 16.7 coord: 155..186 e-value: 0.02 score: 24.1 coord: 190..219 e-value: 320.0 score: 8.7
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 155..189 score: 9.778
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 121..153 score: 9.244
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 88..120 score: 9.404
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 18..50 score: 13.09
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 51..73 score: 9.244
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 80..243 e-value: 1.2E-32 score: 114.9
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..79 e-value: 1.2E-19 score: 72.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 2..230
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 93..187 e-value: 9.8E-14 score: 51.7 coord: 1..74 e-value: 6.0E-9 score: 36.4
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..227 score: 54.672
None	No IPR available	PANTHER	PTHR24178	FAMILY NOT NAMED	coord: 2..164 coord: 167..228 coord: 123..227

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig10	contig	C-linearis_contig10:1060849..1062494 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig10.476.1	mRNA_C-linearis_contig10.476.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig10 1060808..1063373 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig10.476.1 ID=prot_C-linearis_contig10.476.1|Name=mRNA_C-linearis_contig10.476.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=432bp
MVKALVRAGAETDVEDENGDTPVHLAVFRGFEQVVEELVTAGASVDTIDA
EGETPLHTASAHGSLGMVRAILRGSRGNTLLLCHTDHLEMSPLHRAALGG
HCDVMEELLSHGSSLHSLAGNARTPLHAAAMSSSGDAVRFLLRRDSSTLE
AEDRDGRTALHLASGHRLGSDGTLLALLEAGANIEAKTCLVETPLHEACK
ALRVSAVQQVLRFGADDGAVDRGGRTPSALTSALLQSQCPGMFRDMLKII
LQLLAAAPADKVWRRRGWLLMLRSRQLEEVGPGTQSSIVVEQGFDIERGV
CAGVFADGGAVSWRHSMDQEEGNRHSSNGSSRGSSGRPRKVGKAGSTART
AAVVAAAAAAAADGALVARERSNNCCLERNGERGTFRPGKVGGGEACHDG
GGEGHQQLRAAVERVVGVCEDGVFRNIVAFL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom