prot_C-linearis_contig10.463.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.463.1
Unique Nameprot_C-linearis_contig10.463.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length269
Homology
BLAST of mRNA_C-linearis_contig10.463.1 vs. uniprot
Match: A0A6H5JBH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH3_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 3.720e-18
Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 0
Query:   13 CLDALAITLNAAVERGLWYSSTSTKELQMVCLDLCVACRSSWNISTMHVVVTATTSRHLWLHGGQDDDGKKRHDA-LRVPRLPVRAVTVSKWPKRVLPCPPNRERPLSHIRR------VLRRGSNRLGWGPRWWPETLEEVRFGDEFNRPVNDLV 160
            CL+ALA+ +    ++G+W++ST T  L+ VCLD+ ++CR+       HV VT  T R LWL G +D      +    R+P   VR V++ ++P +VL   P  ERP + +        V +   +       WWP+++EE+RFG  FN P++  +
Sbjct:    8 CLEALAVAIRNTSDKGVWFASTRT--LKTVCLDIYLSCRNRATARACHVEVTVDTPRRLWLRGEEDALSLNSNGPPSRIPPPAVRVVSLEEYPAQVLARAPKEERPTTTLDASGLPADVGQVALDEPKQSREWWPDSVEELRFGSRFNHPLDSSI 160          
BLAST of mRNA_C-linearis_contig10.463.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 3.810e-7
Identity = 53/177 (29.94%), Postives = 70/177 (39.55%), Query Frame = 0
Query:   13 CLDALAITLNAAVERGLWYSSTSTKELQMVCLDLCVACRSSWNISTMHVVVTATTSRHLWLHGGQDDDGKKRHDALRVPRLPVRAVTVSK---------------------------------WPKRVLPCPPNRERPLSHIRRVLRRGSNRLGWGPRWWPETLEEVRFGDEFNRPV 156
            CL  L + LN   +   WY  TSTKELQ+  L+LC+ACR   +  T+H+ V A T R L           KR    RVPRL  R  T +                                  WP+R+      +  PL           NRL  G  W P +L +V  G +FN+P+
Sbjct:  136 CLKTLTVALNETCDGKSWY--TSTKELQLASLELCMACR---HYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPL-----------NRLLDGVSW-PASLRKVCLGHDFNQPI 295          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBH3_9PHAE3.720e-1833.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPY7_9PHAE3.810e-729.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 174..215
e-value: 2.1E-4
score: 21.4
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 139..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:923958..925007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.463.1mRNA_C-linearis_contig10.463.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 922112..925817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.463.1 ID=prot_C-linearis_contig10.463.1|Name=mRNA_C-linearis_contig10.463.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=269bp
MVQTTKRAGGIACLDALAITLNAAVERGLWYSSTSTKELQMVCLDLCVAC
RSSWNISTMHVVVTATTSRHLWLHGGQDDDGKKRHDALRVPRLPVRAVTV
SKWPKRVLPCPPNRERPLSHIRRVLRRGSNRLGWGPRWWPETLEEVRFGD
EFNRPVNDLVWPASLQQLSFGYLFNQPIAGVVWPASLQQLSFGHSFNQYF
TGVKWPASLQPLSFGRGFNQHIARVAWPASLQLLSFDNSFNQPVNDVMWL
TSLQTLSLRHRFNRPLQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP