prot_C-linearis_contig10.452.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.452.1
Unique Nameprot_C-linearis_contig10.452.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1029
Homology
BLAST of mRNA_C-linearis_contig10.452.1 vs. uniprot
Match: D7G2T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T2_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 9.040e-62
Identity = 219/538 (40.71%), Postives = 277/538 (51.49%), Query Frame = 0
Query:  451 RRIDGARELRSWVEREVERARDAATEGLHDLRGRWDSELTRLQSAERKLLHLQEQAKYGGRRAALDAREECYAKIERVEKEKWGLRDCLAAEKRQSELLEGTAARLGEQLSVLS-----------GQLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVTRVSALAKALDAEREEREKER-ADRQQEEERVSRDQEAAVLRVSELLEDERVARDEGTSRLTAXXXXXXXXXXXXXXXXXXXXXXVRETQGLLGEMSPGSDRVAGG---LGTPEPRTSRRTGREQRPAPGGASALELQSSRLERLVADAAALVKHTGRFYDRYSKTHKKEN--PSGEREIPRPIPGN---VLGKGEGGGFCRNCGTAAGSSNP--------RPSAKPAFPQGYQQSLGVTASSPTYHGSGSFAPTATATTSPYSQTWRGEEERSGKFLARTVEHGATAAAAVGKNGGTALRELDRQCYSLLESNAQLCLKLQGLGLEYAGLTRVLLATGG-EH 959
            RR+DGAR LR+WV  +VE A   A EGL ++RGRW++EL RLQ+AERKL+ LQEQAKYGGRRAALDAREECYAKIERVE+EKW LRD L +E+R+ E+L     RL +     +            +LE                     XXXXXXXXX                                  +V  V    +   +  +E  + R  +R+ EE+R S   EAA  R++ LLE+ER AR E  +   A                      VRETQGLLGEMSP     AG     G+   R S   G +       +SAL LQ+S+LER+VA+A+ L++ TG FYDRYS+THK      +G+ E    +PG+   + G     G  +N G A G+             SA+ A     ++S G    SP     G F+P        + Q WRG E+ S  FL RT+EH            G ALRELDR CYSLLESNAQLCL++QGLGLEYAGLTR L+A+GG EH
Sbjct:  189 RRVDGARGLRAWVTGKVENAGGDAMEGLREIRGRWEAELGRLQAAERKLVRLQEQAKYGGRRAALDAREECYAKIERVEQEKWALRDSLVSEEREVEVLRAHLKRLKDATDKAAVSAESDYRAACHELEAERGHRQRLQDKTELLEGKASXXXXXXXXXSEQIDRYKTEALQQQQDKDRLLRSQETLQSQLKEEVQSVEKARREFLSNSQEISRGRDKERELEEQRDSAAAEAA--RLTCLLEEERRARREENAMGEAVLRE------------------VRETQGLLGEMSPHRGDPAGTGPFRGSVLERGSSSDGDDP------SSALGLQASKLERIVAEASDLIRRTGHFYDRYSETHKNAGGEKNGDDEASEKLPGSNSGLPGNDATAGRYQNRGAATGAGQSDRYEGRHRAASAEAAI----ERSFGANGRSPGDPPPGVFSPQQPPAGGGH-QPWRGRED-SWNFLDRTLEHRHWV------ETGPALRELDRACYSLLESNAQLCLRIQGLGLEYAGLTRELMASGGGEH 688          
BLAST of mRNA_C-linearis_contig10.452.1 vs. uniprot
Match: A0A6H5K601_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K601_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 6.100e-30
Identity = 94/198 (47.47%), Postives = 119/198 (60.10%), Query Frame = 0
Query:  768 QSSRLERLVADAAALVKHTGRFYDRYSKTHKKE--NPSGEREIPRPIPG---NVLGKGEGGGFCRNCG--TAAGSSNPRPSAKPAFPQG--YQQSLGVTASSPTYHGSGSFAPTATATTSPYSQTWRGEEERSGKFLARTVEHGATAAAAVGKNGGTALRELDRQCYSLLESNAQLCLKLQGLGLEYAGLTRVLLATG 956
            Q+S+LER+VA+A+ L++ TG FYDRYS+THK    + +G+ +    IPG   ++LG     G  +N G  TAAG S+       A   G   ++S G   SSP     G F+P   +      Q WRG E+ SG  L RT+EH        G   G ALRELDR CYSLLESNAQLCL+LQGLGLEYAGL+R LLA+G
Sbjct:    7 QASKLERIVAEASDLIRQTGHFYDRYSETHKNAGGDKNGDDKASEKIPGGNSSLLGNDATAGRHQNRGVATAAGQSDRCEGRHRAASAGAAMERSFGANGSSPGNPPPGVFSPQQLSAGGH--QPWRGRED-SGNCLDRTLEHRH------GVGAGPALRELDRACYSLLESNAQLCLRLQGLGLEYAGLSRQLLASG 195          
BLAST of mRNA_C-linearis_contig10.452.1 vs. uniprot
Match: A0A6H5K0W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W7_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.730e-21
Identity = 124/356 (34.83%), Postives = 167/356 (46.91%), Query Frame = 0
Query:    1 MSGVCRQMRQAAEEAGARRAEAEETARSLQARLALADVATKDAERELEGLGGQLHTAEQQQRREENLLRDKLEAVNRESRQISQAL--------------------KDENEANF-------------------ALRGLLKDQEGRLEKAERHA-------AASSQGSDRSK---------EVSEKLRRELERSQREAEQLRSRLQVSGGLAADEAGRAKEALEAERSVRSDLASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDLSETTKLSQDRLVDSEVYCRAAAAAGRRSESLERRSAEATRAAEAAQSVTVRSEAAHAQVERSLAGFQASVARALGAVEDALVDTLSGVG 301
            MS VC QMR+AAEEAGAR A AEET RSLQ  L+L +VA K+AERE+  L G+                       +E++Q++QA                     K  ++A+F                    L    + +EG  + +E  +        +S +G   S+         EVSE LR  L+RSQ E E+LR+RL+ + GLAADEAG+AKE+  AE   RS LA +                            S +L  ++KLSQDRL+  EV  RAAA A RRS++L+               +  R+EAA  + ER+L  FQ S+ RAL  VEDAL D L G+G
Sbjct:   50 MSAVCGQMRKAAEEAGARSASAEETVRSLQGDLSLMEVAAKEAEREMALLRGKXXXXXXXXXXXXXXXXXXXXXXGQEAKQMAQASFLMILLLLLFLEKSSQKAHKKKIDDAHFFGHVPRLFQTKLLCSFSSVTLSTGSQRREGHDQFSEGFSRGQGGQPGSSGEGVGGSEGKLCTGMGEEVSEGLRAALQRSQGETERLRARLETAVGLAADEAGKAKESSRAEELSRSQLAVSGEREENLQSENASLRNENEGLRRTLASLSAELEASSKLSQDRLIKCEVSARAAAEAERRSDALKXXXXXXXXXXXXXXXLXXRAEAARDERERALGEFQGSMTRALQDVEDALADALQGIG 405          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2T2_ECTSI9.040e-6240.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K601_9PHAE6.100e-3047.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0W7_9PHAE2.730e-2134.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..152
NoneNo IPR availableCOILSCoilCoilcoord: 177..218
NoneNo IPR availableCOILSCoilCoilcoord: 5..92
NoneNo IPR availableCOILSCoilCoilcoord: 553..671
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 53..709
NoneNo IPR availablePANTHERPTHR43939:SF11ZMP:0000001081coord: 53..709

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:434066..444547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.452.1mRNA_C-linearis_contig10.452.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 430623..445227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.452.1 ID=prot_C-linearis_contig10.452.1|Name=mRNA_C-linearis_contig10.452.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1029bp
MSGVCRQMRQAAEEAGARRAEAEETARSLQARLALADVATKDAERELEGL
GGQLHTAEQQQRREENLLRDKLEAVNRESRQISQALKDENEANFALRGLL
KDQEGRLEKAERHAAASSQGSDRSKEVSEKLRRELERSQREAEQLRSRLQ
VSGGLAADEAGRAKEALEAERSVRSDLASAAEREEELRSENAGLAAKIEE
LRATLAKLSTDLSETTKLSQDRLVDSEVYCRAAAAAGRRSESLERRSAEA
TRAAEAAQSVTVRSEAAHAQVERSLAGFQASVARALGAVEDALVDTLSGV
GVAAAAAGGGGEGEGEEARCLAGEGGGAGLAEREGVGDGGGGWSCGRGLT
GPAGVARHLRQFPPSQPPSKWGSRCGAGASSGSFARVGGASFIDGAPTAT
RSGRESGGWLGAAAVMPVEDGVEDDVEAAAKAAAATAMTARLDRVLGRIM
RRIDGARELRSWVEREVERARDAATEGLHDLRGRWDSELTRLQSAERKLL
HLQEQAKYGGRRAALDAREECYAKIERVEKEKWGLRDCLAAEKRQSELLE
GTAARLGEQLSVLSGQLERLKAEQSQRLEEKERLLAHQEALQAQLEQQLS
RGREKEKEIEEQRSSMEAQTRAVEDHNRRAEDQVTRVSALAKALDAEREE
REKERADRQQEEERVSRDQEAAVLRVSELLEDERVARDEGTSRLTALLEE
ERRARREESALGEAVLREVRETQGLLGEMSPGSDRVAGGLGTPEPRTSRR
TGREQRPAPGGASALELQSSRLERLVADAAALVKHTGRFYDRYSKTHKKE
NPSGEREIPRPIPGNVLGKGEGGGFCRNCGTAAGSSNPRPSAKPAFPQGY
QQSLGVTASSPTYHGSGSFAPTATATTSPYSQTWRGEEERSGKFLARTVE
HGATAAAAVGKNGGTALRELDRQCYSLLESNAQLCLKLQGLGLEYAGLTR
VLLATGGEHSHLHDGGRQPLDVADLDGDGSGIFSGDHHHRRQDRQGRHQH
HHRHHRSRGDREHRHDHHDWSPSFETPK*
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