prot_C-linearis_contig10.447.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.447.1
Unique Nameprot_C-linearis_contig10.447.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length237
Homology
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BLAST of mRNA_C-linearis_contig10.447.1 vs. uniprot
Match: A0A6H5JP54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP54_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.260e-17
Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 0 
Query:  143 ECFSAHELATLVEIHGYSHEDATRALTICHEMRRLEAAGIGRVEAARELTRRVL 196
            +CFS  ELATLVE+HGYS EDA RALTICHEMR+LEAAG+GRV AA+ELTRRVL
Sbjct:   54 DCFSPIELATLVEVHGYSPEDARRALTICHEMRKLEAAGVGRVTAAQELTRRVL 107
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BLAST of mRNA_C-linearis_contig10.447.1 vs. uniprot
Match: D7FH95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH95_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.330e-11
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0 
Query:  154 VEIHGYSHEDATRALTICHEMRRLEAAGIGRVEAARELTRRVL 196
            + +HGYS EDA RALTICHEMR LEAAG+G V AA+ELTRRVL
Sbjct:   12 ITVHGYSPEDARRALTICHEMRTLEAAGVGGVAAAQELTRRVL 54
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP54_9PHAE4.260e-1781.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH95_ECTSI1.330e-1176.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:377495..382243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.447.1mRNA_C-linearis_contig10.447.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 376824..384331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.447.1 ID=prot_C-linearis_contig10.447.1|Name=mRNA_C-linearis_contig10.447.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=237bp
MTSPHEAGGDGVEEHGGSSRSSSRGGAGDEMARLARAEAEFRFAVQREQA
ALMASGLGRIEATEELLRRLRDSSSTMGASAAAVSSGGRSGRSSGSGSGS
GGNEGSPAAETEAGLTGGAPPGRPAAAAAAAAAAAAAAAASPECFSAHEL
ATLVEIHGYSHEDATRALTICHEMRRLEAAGIGRVEAARELTRRVLREGR
GRGGGGGGAAHGSRVTAAAGGVAGSGGGLGAHSVVS*
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