prot_C-linearis_contig10.443.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.443.1
Unique Nameprot_C-linearis_contig10.443.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length287
Homology
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 2.750e-112
Identity = 203/260 (78.08%), Postives = 217/260 (83.46%), Query Frame = 0
Query:   28 ALRDDFINRWGDGRDILTYAEGNRRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVESRNEEKAQGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAA--AQAVGDAPAQELGEGADSSTTSLITNPVRAELEAFKASQGSKMYRLDKEGTTLYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTIELLVLLRHSWKIVEEWEASNNAAAAKKG 285
            + + DFINRWGDGR+IL Y EG RRQP GFKP QVLATALDPRTKILYGV+++EKADVWKLV+EEAVKIAVE+RN E +Q AS     XXXXXXXXXXXXXXXXXXXXXXXXXXX      AQAVG A   +L EGADSS   LIT+ VR EL AFK S G KMY  DKEG  +YLDPLDWWRVRC DFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTT+ELLVLLRHSWKIVEEWE SN  AAAK+G
Sbjct:   46 STQPDFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQSNTPAAAKRG 305          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 6.260e-51
Identity = 128/167 (76.65%), Postives = 138/167 (82.63%), Query Frame = 0
Query:    3 DLNELPPSSDADVNTARAAVMPCVIALRDDFINRWGDGRDILTYAEGNRRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEE-AVKIAVESRNEEKAQGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAA--AQAVGDAPAQELGEGADSST 166
            DL ELPP SDA+VNTARAAVMPC+ ALRDDFINRWGDGR+IL Y EG RRQP GFKP QVLATALDPRTKIL+GV+++EKADVWKLVQEE AVKIAVE+RN E +Q  S      XXXXXXXXXXXXXXXXXXXXXXXXXX      AQAVG A   +LGEGADSST
Sbjct:  143 DLAELPPDSDANVNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAENSQRTSSQQGPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLGEGADSST 309          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 4.340e-45
Identity = 106/262 (40.46%), Postives = 138/262 (52.67%), Query Frame = 0
Query:   18 ARAAVMPCVIALRDDFINRWGDGRDILTYAEGNRRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVESRNEEKAQGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLITNPVRAELEAFKASQGSKMYRLDKEGT---TLYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTIELLVLLRHSWKIVEEWEAS 276
            A  AV P   AL  DF NRWGDG +IL Y EG RRQP+GFK  QV ATALDPR K LYG++  E A VW+ V   AV IA+     +KA  ++                                  AAA              AD     L+   V  E+ AFKA+ G +++ + K  T    ++ +PLD WR +  ++P LA LARRVLAIP++QA+SER+FS AG  VT  R+ L    +ELLV LR+ W +V+EW+ S
Sbjct:  298 AMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFE--AAAAXXXXXXXXXXXXXSADEKREQLVAI-VDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKS 556          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 3.640e-43
Identity = 82/110 (74.55%), Postives = 94/110 (85.45%), Query Frame = 0
Query:    1 MEDLNELPPSSDADVNTARAAVMPCVIALRDDFINRWGDGRDILTYAEGNRRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVESRNEEKAQGAS 110
            ++DL ELPP SDA+VNTA AAVMPC+ ALRDD+I+RWGDG +IL Y EG RRQP GFKP  VLATALDPRTKI YGV+++EKADVWKLVQEEAVKIAVE+RN E +Q  S
Sbjct:  218 IDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTS 327          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 8.920e-39
Identity = 90/225 (40.00%), Postives = 115/225 (51.11%), Query Frame = 0
Query:   13 ADVNTARAAVMPCVIALRDDFINRWGDGRDILTYAEGNRRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVESRNEEKAQGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLITNPVRAELEAFKASQGSKMYRLDKEGTTLYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERL 237
            A    A  AV+P   AL +DF+NRWGDG  IL Y EG RRQP+GFK  QV ATA+DPR K LYG+   E A VW+ V  +AV IA E  + +    +                                 F AAA A   A A   G          + + V  E+ +F+ + G  ++    +G  +Y DPLDWWR R  +FPHLA LARRVLAIP++QA SER+
Sbjct:  329 ASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSA----FEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.000e-36
Identity = 129/286 (45.10%), Postives = 170/286 (59.44%), Query Frame = 0
Query:   15 VNTARAAVMPCVIALRDDFINRWGDGRDILTYAEGNRRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVESRNEEKAQGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFM-----------AAAQAVGDAPAQEL---------------GEGADSSTTSLITNPVRAELE--------AFKASQGSKMYRLDKEGTTLYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTIELLVLLRHS 266
            V  A+  V+ C  AL+ D   RWGD  D+L Y EG RRQPRGFK  QVLATAL PR+K LYG+E+ E +DVW     EAVK+A+E++  E      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             A++  +   PA                    G    + +  ++P+R ++E        AFK + G  +   +++G  +   PL+WWRV+  ++P LA+LARRVL IPA QA+SER+FS AG +VTK R  + P  + L+V LR++
Sbjct:  259 VAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAV-SWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.880e-36
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0
Query:  212 TDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTIELLVLLRHSWKIVEEWEASNNAAAAKKG 285
            TDFPHLANLARRVLAIPATQA+SERLFSCAGNIVTKNRNNLAPTT+ELLVLLRHSWKIVEEWE SN  AAA +G
Sbjct:  152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQSNTPAAAMRG 225          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.200e-24
Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 0
Query:   15 VNTARAAVMPCVIALRDDFINRWGDGRDILTYAEGNRRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVESRNEEKAQGA 109
            V  A+  ++ C  AL+ D   RW DG D+L Y EG RRQPRGFK  QVLATALDPR+K LYG+E+ E +DVW+ V  EAVK+A+E++  E  Q A
Sbjct:  231 VAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSA 325          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 2.910e-18
Identity = 68/226 (30.09%), Postives = 96/226 (42.48%), Query Frame = 0
Query:   53 QPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVESRNEEKAQGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLITNPVRAELEAFKASQGSKMYRLDKEGTTLYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTIELLVLLRHSWKIVEEWEASNN 278
            +PRGFK  QVLATALDPR+K LYG+E+ E +DVW+ V  EAVK+A+E++  E  Q A                                   A++  +   PA                     +  A  A  G K    +   +T                        RVL IPA+Q +SER+FS AG +VTK R  + P  +EL++ LR+  + V+ W  + N
Sbjct:  325 EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAG----------------------------------ASSSLIPVEPAAXX----------XXXXXXXXDFAAASAVPGDKQQSANASSST-----------------------SRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRWNGNGN 483          
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Match: A0A2D4C1W9_PYTIN (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1W9_PYTIN)

HSP 1 Score: 78.2 bits (191), Expect = 3.340e-13
Identity = 38/83 (45.78%), Postives = 48/83 (57.83%), Query Frame = 0
Query:  186 GSKMYRLDKEGTTLYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTIELLVLLRHSWK 268
            G ++   D       + PLDWWR R  DFPH+A LARR L+  AT   SER FS AGN++T  R +L P  +  LV L H+ K
Sbjct:  185 GQQVTAEDLNAAVFNIKPLDWWRDRANDFPHVARLARRWLSCVATSVLSERAFSTAGNVITAKRGSLRPELVRDLVFLAHNAK 267          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE2.750e-11278.08Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JVE5_9PHAE6.260e-5176.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI4.340e-4540.46Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5L7Y8_9PHAE3.640e-4374.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE8.920e-3940.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.000e-3645.10Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JPB0_9PHAE1.880e-3690.54Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE3.200e-2454.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE2.910e-1830.09Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A2D4C1W9_PYTIN3.340e-1345.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Py... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 201..264
e-value: 1.0E-17
score: 63.7
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 62..257
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 59..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:273312..274172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.443.1mRNA_C-linearis_contig10.443.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 272524..276430 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.443.1 ID=prot_C-linearis_contig10.443.1|Name=mRNA_C-linearis_contig10.443.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=287bp
MEDLNELPPSSDADVNTARAAVMPCVIALRDDFINRWGDGRDILTYAEGN
RRQPRGFKPAQVLATALDPRTKILYGVEDNEKADVWKLVQEEAVKIAVES
RNEEKAQGASSQQRPEAAAAAASSTTSAGEEDSSRKRRGGGGFMAAAQAV
GDAPAQELGEGADSSTTSLITNPVRAELEAFKASQGSKMYRLDKEGTTLY
LDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRN
NLAPTTIELLVLLRHSWKIVEEWEASNNAAAAKKGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf