Homology
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match:
D7G7U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U4_ECTSI)
HSP 1 Score: 85.1 bits (209), Expect = 1.270e-19
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0
Query: 1 MPAAHQTRDEVSACWRALSEHQHFRRLTTPEKLQMINHRPLQPVAVHLMIE 51
MPAA +TR+ VSACWRALSEH+HF RLTTPEKLQMINHRP Q VAVHL+ E
Sbjct: 58 MPAARETREAVSACWRALSEHEHFCRLTTPEKLQMINHRPSQAVAVHLVSE 108
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match:
A0A225VL34_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VL34_9STRA)
HSP 1 Score: 51.6 bits (122), Expect = 3.200e-6
Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGS 76
LT+ EKLQ INH P++ V +HL+IEDC RF + V+ELI ++E+ LG+
Sbjct: 80 LTSAEKLQFINHIPMELVDIHLIIEDCAGRF-SETQVDELIRIVERTLGA 128
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match:
A0A397ECQ9_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ECQ9_9STRA)
HSP 1 Score: 50.1 bits (118), Expect = 9.260e-6
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGSAESGE 81
LT EKLQ INH P++ V VHL+IEDC R + VEEL+A+ + LG+ + E
Sbjct: 74 LTNAEKLQFINHCPMELVDVHLIIEDCAERLTE-VQVEELMAITAETLGATDDDE 127
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match:
A0A485KMP9_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485KMP9_9STRA)
HSP 1 Score: 50.1 bits (118), Expect = 9.910e-6
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGSAESGE 81
LT EKLQ INH P++ V VHL+IEDC R + VEEL+A+ + LG+ + E
Sbjct: 78 LTNAEKLQFINHCPMELVDVHLIIEDCAERLTE-VQVEELMAITAETLGATDDDE 131
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match:
A0A5D6Y3B9_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3B9_9STRA)
HSP 1 Score: 50.1 bits (118), Expect = 1.110e-5
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGSAESGE 81
LT EKLQ INH P++ V VHL++EDC RF +A ++ELI ++E+ L G+
Sbjct: 79 LTPAEKLQFINHVPVELVDVHLIVEDCAGRF-SEAQIDELIQIVEQTLAHKPEGD 132
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match:
K3X3I4_GLOUD (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3I4_GLOUD)
HSP 1 Score: 49.7 bits (117), Expect = 1.510e-5
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHL 74
LT EKLQ INH P++ V VHL++EDC RF +A +EELI ++E+ L
Sbjct: 79 LTPAEKLQFINHIPVELVDVHLIVEDCAGRF-SEAQIEELIQIVEQTL 125
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 6
M P A A H Q T R D E V S A C W R A L S E H Q H F R R L T T P E K L Q M I N H R P L Q P V A V H L M I E D C H R R F R D D A L V E E L I A L L E K H L G S A E S G E * 10 20 30 40 50 60 70 80 Expect = 1.27e-19 / Id = 80.39 Expect = 3.20e-6 / Id = 52.00 Expect = 9.26e-6 / Id = 49.09 Expect = 9.91e-6 / Id = 49.09 Expect = 1.11e-5 / Id = 47.27 Expect = 1.51e-5 / Id = 54.17 Sequence D7G7U4_ECTSI A0A225VL34_9STRA A0A397ECQ9_9STRA A0A485KMP9_9STRA A0A5D6Y3B9_9STRA K3X3I4_GLOUD back to top