prot_C-linearis_contig99.17172.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match: D7G7U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U4_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.270e-19 Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0 Query: 1 MPAAHQTRDEVSACWRALSEHQHFRRLTTPEKLQMINHRPLQPVAVHLMIE 51 MPAA +TR+ VSACWRALSEH+HF RLTTPEKLQMINHRP Q VAVHL+ E Sbjct: 58 MPAARETREAVSACWRALSEHEHFCRLTTPEKLQMINHRPSQAVAVHLVSE 108
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match: A0A225VL34_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VL34_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 3.200e-6 Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 0 Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGS 76 LT+ EKLQ INH P++ V +HL+IEDC RF + V+ELI ++E+ LG+ Sbjct: 80 LTSAEKLQFINHIPMELVDIHLIIEDCAGRF-SETQVDELIRIVERTLGA 128
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match: A0A397ECQ9_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ECQ9_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 9.260e-6 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0 Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGSAESGE 81 LT EKLQ INH P++ V VHL+IEDC R + VEEL+A+ + LG+ + E Sbjct: 74 LTNAEKLQFINHCPMELVDVHLIIEDCAERLTE-VQVEELMAITAETLGATDDDE 127
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match: A0A485KMP9_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485KMP9_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 9.910e-6 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0 Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGSAESGE 81 LT EKLQ INH P++ V VHL+IEDC R + VEEL+A+ + LG+ + E Sbjct: 78 LTNAEKLQFINHCPMELVDVHLIIEDCAERLTE-VQVEELMAITAETLGATDDDE 131
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match: A0A5D6Y3B9_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3B9_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 1.110e-5 Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0 Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHLGSAESGE 81 LT EKLQ INH P++ V VHL++EDC RF +A ++ELI ++E+ L G+ Sbjct: 79 LTPAEKLQFINHVPVELVDVHLIVEDCAGRF-SEAQIDELIQIVEQTLAHKPEGD 132
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Match: K3X3I4_GLOUD (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3I4_GLOUD) HSP 1 Score: 49.7 bits (117), Expect = 1.510e-5 Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0 Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHL 74 LT EKLQ INH P++ V VHL++EDC RF +A +EELI ++E+ L Sbjct: 79 LTPAEKLQFINHIPVELVDVHLIVEDCAGRF-SEAQIEELIQIVEQTL 125 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig99.17172.1 ID=prot_C-linearis_contig99.17172.1|Name=mRNA_C-linearis_contig99.17172.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=82bpback to top |