prot_C-linearis_contig98.17125.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig98.17125.1
Unique Nameprot_C-linearis_contig98.17125.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1521
Homology
BLAST of mRNA_C-linearis_contig98.17125.1 vs. uniprot
Match: A0A6H5K5B5_9PHAE (BAH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5B5_9PHAE)

HSP 1 Score: 608 bits (1569), Expect = 5.740e-190
Identity = 544/1285 (42.33%), Postives = 651/1285 (50.66%), Query Frame = 0
Query:  251 SDVGSVDEDGEDYTWYSSERRTSGGERKHGRGRPRGERVYERVRINDNAEEINALRQELADGNVEKSNGMEKLRRLEEKMFFVKIGDAVEIHSGNESQPFVGRLENLDRATRRFRVRWFFVRHEVEEHLQEDMEPKEILLSDRYSN-QSLGSINRKADTVTEKSARGQELPPHTYLCYRGYDMKRKAIVALLEDGSLEKKTRGGGSKNKTKKDRSLARVARAVVSSPXXXXXXXXXXXXXXXXXXXXXXXXXIMSPS---QEDSDGPENVLLQRWNRVGPEFDVAVPAWKGPAAETLSPSPDEKKARLSSFHFLIFQLWSSSLHQSWSPSKVQEYLRDARALAPILPGTLVYIRPNADGQWSDGSDRKRARSAGPPDTTTTSHSVGAAAAAPAGPRLGWANGARSSFRWGLVSEPPSAEPPFTERASTEQRGRGVQVAQDRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQQPGEGMGTVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNPFFANPFVFQQHQHANSLLQQQWLQQGVGRGG---DHPMA---MAPGSAAQGP--PRRPVPGSVPGPALSHARPPPPAPEYAIVWIANPCEGKPPLPVERWRVLERGFEEEALDVLWDTRGNFDEAKARVRSKEFRDELKAKLQGAGELWAFDQVKAAQKMCAKASAERRNEELGEMGDELTDEVEYGVESKPFPVVVDFGRRFTSLLRLGQPPKRRAVTEAAIAAATARXXXXXXXXYPRAGAVPFHGTVPVAGAGTXXXXAARAAKRPRPKQGTYADTRPKKKSAGGAVDGVGPGGETTDLARGPAARRAVKDAEDNHEREYXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEDTSYNPDDSEGSSLIFVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGXXXXXXXXXXSTCLDTRTGHRAEQARHASRNPISSSASPP-GEIHDLCSSEDDDYEEDNALGEDGXXXXXXXXXXXXXXXXXXXXXXXXXPLPLSARAQAYPDGCTQEAGRGGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRHQSFAPTSVA--EAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDTEQGDGGPSSPQDGAGVGXXXXGDDLPPARDESPVPGVKSDNTGGEAMAPRPADETGGVLQAFMTRVKTTLQQELFDKFVHALSDYRAQNLVIDELVDMVSECFDHRQEREMRLVNEFNTFLPPGHAIRYTKA 1520
            SD GSVDED +DYTW+SSE+R SGGERKHGRGR  G RVY+RVRI D+AEEIN L+Q+LADG++E+S+G EKLR LE K F +KIGD +EIHSGN++QPFVG+L  LDR TRRFRVRW+FVRHEV+  L EDMEPKEILLSD  S+ Q L +++RK DTV  +    QELP +TYLCYRGYDMK K IV LLEDGSLEK  RG   K  T+K ++ +R A +  +S                          IMSPS   QED+D  E VLLQRWNR GPEFDV VP W  P   T  P P+E K   S F     Q WS+     + P  +++YL  A+A+API+PGT+VYIRP  DGQW DG   K+ R   P  +      V A     AGPRL   + ARS++RWGLV+EPP   PP  ++  T ++      A    G                                      + Q+  + M                    XXXXXXXXXXXX    +    + F  Q     NSLLQ   +QQG   GG    H MA   +AP S  +G   P    P SVPG A+  A+      E ++VWIA+P EG  PL VER R++ R FEEEA+++LWD RG F  A   V+SK ++D+LK +L+ AGE+W F QVKAA K C K +AERRNEE+GE+GDE TDE +YGV SKPF  VVDF RRF +L R GQ  KRR   EAA                          TV    A T    A+  AKR RPK GTY D RP KK A     G                                                              D S   + S          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXX                  SR P S    P  G IHDLCSS+++D   D  L   G                           P +  A A   G +  AG  G                                  + HQ+ AP + A  EAA                              XXXXXXXXX                + + +G      DG+GVG     D  PPARD+SPVPGV S NTGGEAMAPRP  ETG VL  FM R K TL  E FDKFV ALS YR Q L I ELVD+V +CF+H +ERE++LV EFN+FLPPG+A++ T+A
Sbjct:  206 SDAGSVDEDNDDYTWFSSEKRVSGGERKHGRGRLGGGRVYDRVRITDHAEEINTLKQQLADGSIEESDGREKLRELEAKTFTIKIGDTIEIHSGNDAQPFVGKLVLLDRGTRRFRVRWYFVRHEVDAQLAEDMEPKEILLSDCLSSYQLLDTVDRKVDTVRTRPPHAQELPANTYLCYRGYDMKAKMIVPLLEDGSLEKFRRG---KPSTRKGQASSRGAVSPGASSAAAAHTPPRASTSSS----------IMSPSNPSQEDNDPSELVLLQRWNRTGPEFDVYVPKWTEPTRRT-KPPPEEYKVAQSRFDDC--QQWSTEA-LPFEPDALKDYLARAKAIAPIIPGTIVYIRPRPDGQWGDGKTVKQVRR--PNGSGGARSVVSAGLDTGAGPRL--TSMARSTYRWGLVAEPP---PPAQKQQLTREQVPSRTEALLVQGAPNIPMMQEPATGNTGVDMQMTPQWFREQQQQQQHVRFEEQRQXQLM--------------------XXXXXXXXXXXXYHRRDHISGDSFRPQLQLPPNSLLQSNLIQQGSNLGGLAGAHAMAAQEVAPASKPRGGGNPHALAPSSVPGDAM--AKEAGATNEESVVWIASPSEGSSPLQVERSRIVRREFEEEAMNILWDARGQFGVALDIVKSKRYQDDLKRRLKNAGEIWTFQQVKAAVKTCTKLAAERRNEEMGELGDECTDEADYGVASKPFRCVVDFSRRFATLSRFGQNTKRRGTAEAA--------------------------TVAQGVAAT----ASTTAKRQRPKPGTYNDARPHKKRARAGSSG-------------------------------------------------------------SDRSCKQEQSYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRKPTSPPLDPSLGVIHDLCSSDEEDDIHD--LSRKG---------------------------PAAGSADAPSAGRSPGAGGRGDH--------------------------------EGHQAMAPETAAKVEAAAAARETRGVAVEAAARAEADGVDVENGGPAXXXXXXXXXAGMPSACPKEACGGTMSTEREG------DGSGVGS----DAPPPARDDSPVPGVASGNTGGEAMAPRPQAETGSVLHVFMDRCKATLTPERFDKFVSALSQYREQRLSIGELVDVVGQCFNHHEEREVKLVKEFNSFLPPGNAVKITRA 1282          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5B5_9PHAE5.740e-19042.33BAH domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 929..949
NoneNo IPR availableCOILSCoilCoilcoord: 1075..1095
NoneNo IPR availableGENE3D1.20.1160.11coord: 1447..1510
e-value: 3.2E-6
score: 28.6
NoneNo IPR availableGENE3D2.30.30.490coord: 298..470
e-value: 2.1E-9
score: 39.2
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 178..1288
IPR003822Paired amphipathic helixPROSITEPS51477PAHcoord: 1438..1512
score: 9.53
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 331..441
score: 13.252
IPR036600Paired amphipathic helix superfamilySUPERFAMILY47762PAH2 domaincoord: 1448..1512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig98contigC-linearis_contig98:377102..389465 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig98.17125.1mRNA_C-linearis_contig98.17125.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig98 375539..395801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig98.17125.1 ID=prot_C-linearis_contig98.17125.1|Name=mRNA_C-linearis_contig98.17125.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1521bp
MDVTLEPVVDMAPAITSATISYAAAAAAAAAAAAAAAATENDEPAAVASA
PPPPANGHHQPSGGSAATAAGGVATSSSVVDVDQDQDQGLVLEQAAEPPG
CGGDDNIVRALAFAEEREQERHPTAPPPPAPAAAAASAQQGLSTGGGTGT
SAVCPPPSSTSSAINVCGGVDLGPASSGSGSGAPPSARSSEGFAARLGRL
SESGNGAAGAAASGGSTARDSGGGDVVNVSVNGGRGGGTGSSSGQDDGRF
SDVGSVDEDGEDYTWYSSERRTSGGERKHGRGRPRGERVYERVRINDNAE
EINALRQELADGNVEKSNGMEKLRRLEEKMFFVKIGDAVEIHSGNESQPF
VGRLENLDRATRRFRVRWFFVRHEVEEHLQEDMEPKEILLSDRYSNQSLG
SINRKADTVTEKSARGQELPPHTYLCYRGYDMKRKAIVALLEDGSLEKKT
RGGGSKNKTKKDRSLARVARAVVSSPGGGYAASTGGAGVGTPPPRSSSSS
SIMSPSQEDSDGPENVLLQRWNRVGPEFDVAVPAWKGPAAETLSPSPDEK
KARLSSFHFLIFQLWSSSLHQSWSPSKVQEYLRDARALAPILPGTLVYIR
PNADGQWSDGSDRKRARSAGPPDTTTTSHSVGAAAAAPAGPRLGWANGAR
SSFRWGLVSEPPSAEPPFTERASTEQRGRGVQVAQDRGGGGAVGGSPNAG
MLMMKQQPVAAAGGRGGVPPQWFTQQRQYQQPGEGMGTVQQQQQLELAQR
RFRTMMQQQHQQLQQQQHQQQHNPFFANPFVFQQHQHANSLLQQQWLQQG
VGRGGDHPMAMAPGSAAQGPPRRPVPGSVPGPALSHARPPPPAPEYAIVW
IANPCEGKPPLPVERWRVLERGFEEEALDVLWDTRGNFDEAKARVRSKEF
RDELKAKLQGAGELWAFDQVKAAQKMCAKASAERRNEELGEMGDELTDEV
EYGVESKPFPVVVDFGRRFTSLLRLGQPPKRRAVTEAAIAAATARAAAAA
AAAYPRAGAVPFHGTVPVAGAGTGAGTAARAAKRPRPKQGTYADTRPKKK
SAGGAVDGVGPGGETTDLARGPAARRAVKDAEDNHEREYEEEEDEGEGEG
EGEDEDEEEDEETASSDGSEDTSYNPDDSEGSSLIFVRGKNRRRKRGRSP
TVAQQEQDQEQEQDQAQADVGGSDGGGSSSSSTCLDTRTGHRAEQARHAS
RNPISSSASPPGEIHDLCSSEDDDYEEDNALGEDGDGDGDREGHSAAAAA
AAEDQNPTVSPLPLSARAQAYPDGCTQEAGRGGSSSGGSSGGSSGGSSGG
SSGGSSGGSSGGSSGGSDRHQSFAPTSVAEAAAAAAVTETQGVAAEAAAK
AEADGVEAENGGAVAAAGGGGGEAGLPSLSPSPSPKDTEQGDGGPSSPQD
GAGVGGGSGGDDLPPARDESPVPGVKSDNTGGEAMAPRPADETGGVLQAF
MTRVKTTLQQELFDKFVHALSDYRAQNLVIDELVDMVSECFDHRQEREMR
LVNEFNTFLPPGHAIRYTKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003822PAH
IPR001025BAH_dom
IPR036600PAH_sf