Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17113.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 23..37 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 10..18 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 19..22 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..22 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 65..103 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 38..64 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..9 |
| None | No IPR available | TMHMM | TMhelix | | coord: 10..32 |
| None | No IPR available | TMHMM | TMhelix | | coord: 39..58 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig97.17113.1 ID=prot_C-linearis_contig97.17113.1|Name=mRNA_C-linearis_contig97.17113.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=104bp
MASPVMEGMFLAPAAAAVKAVAVKLCLIRGFPALSLRSALVFNIVILLCL
VKAPALSLGSPLVFNMLLCSLCRYPSSLFIHLPSDLNGVPSRRSNSLLLS
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