prot_C-linearis_contig97.17106.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig97.17106.1
Unique Name	prot_C-linearis_contig97.17106.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	257

Homology

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 5.610e-61
Identity = 105/186 (56.45%), Postives = 127/186 (68.28%), Query Frame = 0

Query:   15 GIMMNACKASGRTAARLGKGAMRPSVSKLPMRQLPAQIGASSFLSTANWSADQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADGWKIVSHHSSGMPAAPAGLK 200
            G  MNA   S R+   + + A R +  KLP+RQ+  Q   +     AN+++DQKAV  AT NWRDTVTSNT+ APK+TAA+YA DALFWGTVSEQVR TP+HV DYF+FFAR PKL M   +P   ++HGD  IH G YTF W  ADG+  E  AR+TF+YRRE   W +V HHSS MP AP GLK
Sbjct:   34 GGSMNAL-LSTRSGLTVTQAATRLTAVKLPVRQMSGQADYA-----ANYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLK 213

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.200e-57
Identity = 88/140 (62.86%), Postives = 106/140 (75.71%), Query Frame = 0

Query:   61 ANWSADQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADGWKIVSHHSSGMPAAPAGLK 200
            AN++ADQKAV  AT +WRDTVTSNT+ APK+TAA+YA DALFWGTVSE+VR TP+HV DYF+FFAR PKL M   +P   ++HGD  +H G YTF W  ADG+  E  AR+TF+YRRE   W ++ HHSS MP AP GLK
Sbjct:    9 ANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLK 148

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.990e-44
Identity = 81/141 (57.45%), Postives = 97/141 (68.79%), Query Frame = 0

Query:   66 DQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADG----WKIVSHHSSGMPAAPAGLKAV 202
            DQKAV   T  W+DTVT  TD APK+TAALYAPDA+ WGTVSE+VR TP+ + DYF+FFAR PKLR+    P  V+V+G+  +  G YTF WQ  DG  VE  AR++F++RR   G    W IV HHSS MP APA LK V
Sbjct:  293 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPV 433

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.220e-43
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 0

Query:   49 PAQIGASSFLSTANWSADQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADG----WKIVSHHSSGMPAAPAGLKAV 202
            P  + A S   +A  + D++AV + T  W+DTVTS T  APK+TAALYAPD   WGTVSE+VR TPQ +  YF++FAR P+LR+    P  V+V+GD  +  G YTF WQA DG+ VE  AR++F++RR+  G    W IV HHSS MP APAGLKAV
Sbjct:  155 PGSLRAPSPAKSATEAEDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAV 312

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 4.810e-43
Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 0

Query:   66 DQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADG----WKIVSHHSSGMPAAPAGLKAV 202
            D++AV + T  W+DTVTS T  APK+TAALYAPD   WGTVSE+VR TPQ +  YF++FAR P+L++    P  V+V+GD  +  G YTF WQA DG+ VE  AR++F++RR+  G    W IV HHSS MP APAGLKAV
Sbjct:   27 DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAV 167

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 7.150e-43
Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = 0

Query:   66 DQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADG----WKIVSHHSSGMPAAPAGLKAV 202
            DQKAV + T  W+DTVT  TD APK+TAALYAPDA+ WGTVSE+VR TP+ + DYF+FFAR PKLR+    P  V+V+G+  +  G YTF W+  DG  VE  AR++F++RR   G    W IV HHSS MP APA LK V
Sbjct:  322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHV 462

[Close]

BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.110e-42
Identity = 80/141 (56.74%), Postives = 96/141 (68.09%), Query Frame = 0

Query:   66 DQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADG----WKIVSHHSSGMPAAPAGLKAV 202
            DQKAV   T  W+DTVT  TD APK+TAALYA DA+ WGTVSE+VR TP+ + DYF+FFAR PKLR+    P  V+V+G   +  G YTF WQ  DG  VE  AR++F++RR+  G    W IV HHSS MP APA LK V
Sbjct:  287 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPV 427

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 9.670e-40
Identity = 76/143 (53.15%), Postives = 96/143 (67.13%), Query Frame = 0

Query:   66 DQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRRE----ADGWKIVSHHSSGMPAAPAGLKAVSN 204
            D KAV + T  W++TVT  T+ APK+TAALYA DA+ WGTVSE+VR TP+ + DYF+FFAR PKLR+    P   +V+G   +  G YTF WQ  DG  VE  AR++F++RR+       W IV HHSS MP+AP GLK V N
Sbjct: 1417 DMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVEN 1559

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 1.650e-38
Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 0

Query:   66 DQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRRE----ADGWKIVSHHSSGMPAAPAGLKAVSN 204
            + KA  + T  W+DTVT  T+ APK+T+ALY  DA+ WGTVSE+VR TP+ + DYF+FFAR PKLR+   +P   +V+G   +  G YTF WQ  D   VE  AR++F++RR+       W IV HHSS MP+APAGLK V N
Sbjct:  292 EMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVEN 434

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BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.420e-35
Identity = 65/140 (46.43%), Postives = 89/140 (63.57%), Query Frame = 0

Query:   66 DQKAVLKATENWRDTVTSNTDSAPKETAALYAPDALFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHLGDYTFMWQAADGSDVEVDARYTFSYRREADG---WKIVSHHSSGMPAAPAGLKAV 202
            D+K V + T  W++ VT  T  AP++TA LYA D + WGTVSE+VR TP+ + DYF++FAR P LR++   P  ++V+GD     G YTF WQ  DG   E  AR++F++R + +    W IV HHSS MP +P  LK V
Sbjct:  103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLKHV 242

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot

BLAST of mRNA_C-linearis_contig97.17106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K7Z6_9PHAE	5.610e-61	56.45	DUF4440 domain-containing protein n=7 Tax=Ectocarp...	[more]
A0A6H5K6U8_9PHAE	1.200e-57	62.86	DUF4440 domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5JT29_9PHAE	1.990e-44	57.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FUF9_ECTSI	1.220e-43	53.16	Similar to Uncharacterized protein conserved in ba...	[more]
A0A6H5JX02_9PHAE	4.810e-43	56.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0Z5_9PHAE	7.150e-43	56.74	PDZ domain-containing protein n=2 Tax=Ectocarpus T...	[more]
D7FUF8_ECTSI	1.110e-42	56.74	Similar to Uncharacterized protein conserved in ba...	[more]
A0A6H5LB09_9PHAE	9.670e-40	53.15	Reverse transcriptase domain-containing protein n=...	[more]
D7FN21_ECTSI	1.650e-38	51.05	Similar to Uncharacterized protein conserved in ba...	[more]
A0A6H5JSB2_9PHAE	1.420e-35	46.43	DUF4440 domain-containing protein n=2 Tax=Ectocarp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027843	Domain of unknown function DUF4440	PFAM	PF14534	DUF4440	coord: 71..184 e-value: 7.7E-15 score: 55.2
None	No IPR available	GENE3D	3.10.450.50		coord: 58..206 e-value: 9.8E-35 score: 121.7
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 58..193

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig97	contig	C-linearis_contig97:425565..428584 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig97.17106.1	mRNA_C-linearis_contig97.17106.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig97 424182..428912 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig97.17106.1 ID=prot_C-linearis_contig97.17106.1|Name=mRNA_C-linearis_contig97.17106.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=257bp
MVSPTQLPTLQTFTGIMMNACKASGRTAARLGKGAMRPSVSKLPMRQLPA
QIGASSFLSTANWSADQKAVLKATENWRDTVTSNTDSAPKETAALYAPDA
LFWGTVSEQVRTTPQHVDDYFEFFARNPKLRMTRLNPGMVQVHGDIGIHL
GDYTFMWQAADGSDVEVDARYTFSYRREADGWKIVSHHSSGMPAAPAGLK
AVSNVQAGGQRVLPKVKPARFGWLCPPPPSPGFLLSPAVHRPFAPVFLAE
RCRRST*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027843	DUF4440
IPR032710	NTF2-like_dom_sf