Homology
BLAST of mRNA_C-linearis_contig96.17059.1 vs. uniprot
Match:
A0A6H5L4D8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D8_9PHAE)
HSP 1 Score: 423 bits (1087), Expect = 1.920e-140
Identity = 288/392 (73.47%), Postives = 308/392 (78.57%), Query Frame = 0
Query: 162 SSMRLPWMGVLAATAVAGGAAAVYPRGARSNVTWKEGSKQVSAKVGGLTVNVARAQNLKSVSTMSTQDPYVKAKLLVDGYQISEVRSGTHNNGGRNPDWTRRNNFFTFYVPSNVPLSKLAVVLEVYDSNSMSSDKMIGTCGQIPLNGIADGKMRWWTVTSGGQLQASAYSDVQFGEGKPPKNGGQCQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNEYNSYVNGMNSAGRNQEVVSFEVWANGRYRD---RSSXXXXXXXXXXXXXYD------RKN----GGRKHGYGDRGG---YAVPAG---GYAAPTGTAPPXXXXXXXXXXXSAAFQSPNYRPPATAPSAPPAYPSTAYPPAAGVAGQPQAPPPYPGE--PQQG--YYN 530
S+MRLPWMGVLAATAVA GAAA YPRGARS VTWKEGSKQVSA+VGGLTVNVA AQNLKSVSTMSTQDPYVKAKLLVDGYQ+SEV+SGTHNNGGRNP W RNNFFTFYVPSNVPL KLAVVLE+YD N+MS+DKMIGTCG+IPL GIADGKMRWWTVTSGGQLQAS +SDV+F K K+GGQ Q XXXXXXXXXXXXXXXXXXXXXXXXXX SRNEYN+YVNGMN+AGRN EV+ +E WANGRYRD R SXXXXXXXXXXXXX RK+ GG +HGYGD G YA PAG GYA PT P A FQSP+YRPPATAPSAPPAYP+TAYPPAA GQ PPPYP PQQG YY+
Sbjct: 94 SAMRLPWMGVLAATAVASGAAAAYPRGARSQVTWKEGSKQVSAQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQVSEVKSGTHNNGGRNPSWAGRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASVFSDVKFNSTKASKSGGQKQHXXXXXXXXXXXXXXXXXXXXXXXXXXX------SRNEYNNYVNGMNNAGRNHEVLPYEAWANGRYRDNRRRESXXXXXXXXXXXXXXXXXXXXXRKHQYGGGGSRHGYGDNRGHTKYAAPAGSNAGYAPPTALPP----YTYGAGGAPANFQSPDYRPPATAPSAPPAYPATAYPPAASAPGQXXXPPPYPRATAPQQGGVYYS 475
BLAST of mRNA_C-linearis_contig96.17059.1 vs. uniprot
Match:
D7G451_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G451_ECTSI)
HSP 1 Score: 325 bits (832), Expect = 1.590e-103
Identity = 162/187 (86.63%), Postives = 172/187 (91.98%), Query Frame = 0
Query: 162 SSMRLPWMGVLAATAVAGGAAAVYPRGARSNVTWKEGSKQVSAKVGGLTVNVARAQNLKSVSTMSTQDPYVKAKLLVDGYQISEVRSGTHNNGGRNPDWTRRNNFFTFYVPSNVPLSKLAVVLEVYDSNSMSSDKMIGTCGQIPLNGIADGKMRWWTVTSGGQLQASAYSDVQFGEGKPPKNGGQCQ 348
S+MRLPWMGVLAATAVAGGAAA YPRGARS VTWKEGSKQVSA+VGGLTVNVA AQNLKSVSTMSTQDPYVKAKLLVDGYQISEV+SGTHNNGGRNP W RRNNFFTFYVPSNVPL KLAVVLE+YD N+MS+DKMIGTCG+IPL GIADGKMRWWTVTSGGQLQAS +SDV+F K K+GGQ Q
Sbjct: 117 SAMRLPWMGVLAATAVAGGAAAAYPRGARSQVTWKEGSKQVSAQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQISEVKSGTHNNGGRNPSWARRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGIADGKMRWWTVTSGGQLQASVFSDVKFNSTKASKSGGQKQ 303
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17059.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M P D L K D F G G L G G L S G A A G G L G A L A S L A G G G R R G P G G G G G G G G L G G L G G L G V G M L A G M A G G A A M G G G R N N N H Y N N H R N D M V N L R N N Y N N H R N N H C G G G G Y H S G H G G H G G F G G G G G F G H H G G Y G Y G R G G V G V G L G G M G M G G G Y G M G G M G G H H G Y R G G H H G Y R G S S M R L P W M G V L A A T A V A G G A A A V Y P R G A R S N V T W K E G S K Q V S A K V G G L T V N V A R A Q N L K S V S T M S T Q D P Y V K A K L L V D G Y Q I S E V R S G T H N N G G R N P D W T R R N N F F T F Y V P S N V P L S K L A V V L E V Y D S N S M S S D K M I G T C G Q I P L N G I A D G K M R W W T V T S G G Q L Q A S A Y S D V Q F G E G K P P K N G G Q C Q Q Q Y Q Q R P K K S K D K S K K K K K K K S K D K R R Y G G G G G G S R N E Y N S Y V N G M N S A G R N Q E V V S F E V W A N G R Y R D R S S S S S D S S S S S S D S D Y D R K N G G R K H G Y G D R G G Y A V P A G G Y A A P T G T A P P G G Y N Y V A G G A P S A A F Q S P N Y R P P A T A P S A P P A Y P S T A Y P P A A G V A G Q P Q A P P P Y P G E P Q Q G Y Y N P * 50 100 150 200 250 300 350 400 450 500 Expect = 1.92e-140 / Id = 73.47 Expect = 1.59e-103 / Id = 86.63 Sequence A0A6H5L4D8_9PHAE D7G451_ECTSI
Match Name E-value Identity Description
A0A6H5L4D8_9PHAE 1.920e-140 73.47 C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more] D7G451_ECTSI 1.590e-103 86.63 C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M P D L K D F G G L G G L S G A A G G L G A L A S L A G G G R R G P G G G G G G G G L G G L G G L G V G M L A G M A G G A A M G G G R N N N H Y N N H R N D M V N L R N N Y N N H R N N H C G G G G Y H S G H G G H G G F G G G G G F G H H G G Y G Y G R G G V G V G L G G M G M G G G Y G M G G M G G H H G Y R G G H H G Y R G S S M R L P W M G V L A A T A V A G G A A A V Y P R G A R S N V T W K E G S K Q V S A K V G G L T V N V A R A Q N L K S V S T M S T Q D P Y V K A K L L V D G Y Q I S E V R S G T H N N G G R N P D W T R R N N F F T F Y V P S N V P L S K L A V V L E V Y D S N S M S S D K M I G T C G Q I P L N G I A D G K M R W W T V T S G G Q L Q A S A Y S D V Q F G E G K P P K N G G Q C Q Q Q Y Q Q R P K K S K D K S K K K K K K K S K D K R R Y G G G G G G S R N E Y N S Y V N G M N S A G R N Q E V V S F E V W A N G R Y R D R S S S S S D S S S S S S D S D Y D R K N G G R K H G Y G D R G G Y A V P A G G Y A A P T G T A P P G G Y N Y V A G G A P S A A F Q S P N Y R P P A T A P S A P P A Y P S T A Y P P A A G V A G Q P Q A P P P Y P G E P Q Q G Y Y N P * 50 100 150 200 250 300 350 400 450 500 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Expect = 3.7E-6 / Score = 36.4 Expect = 6.2E-11 / Score = 42.5 Score = 13.801 Expect = 1.6E-16 / Score = 62.7 Sequence Coil PTHR47052 TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN SSF49562 TMhelix TMhelix TMhelix TMhelix SM00239 PF00168 PS50004 G3DSA:2.60.40.150
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 72..92 None No IPR available PANTHER PTHR47052 FAMILY NOT NAMED coord: 202..530 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 46..66 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 27..45 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 7..26 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 166..185 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..6 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 186..531 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 67..165 None No IPR available SUPERFAMILY 49562 C2 domain (Calcium/lipid-binding domain, CaLB) coord: 203..323 None No IPR available TMHMM TMhelix coord: 127..149 None No IPR available TMHMM TMhelix coord: 7..29 None No IPR available TMHMM TMhelix coord: 44..66 None No IPR available TMHMM TMhelix coord: 164..186 IPR000008 C2 domain SMART SM00239 C2_3c coord: 208..318 IPR000008 C2 domain PFAM PF00168 C2 coord: 209..311 IPR000008 C2 domain PROSITE PS50004 C2 coord: 209..302 IPR035892 C2 domain superfamily GENE3D 2.60.40.150 coord: 203..377
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig96.17059.1 ID=prot_C-linearis_contig96.17059.1|Name=mRNA_C-linearis_contig96.17059.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=532bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: