Homology
BLAST of mRNA_C-linearis_contig95.16976.1 vs. uniprot
Match: D7FLY7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLY7_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 3.930e-16 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 123 DETKTTECCGEGAQ-PTERDIVMFKEAKRREHFEGMVPGSLTPYPWRSMYYGRGRPRCARRLSSLSSSGYNMAG 195
D+ +TTE E + PT +D+ M K A RREH + MVPG+LTP PWRS++YGRGRP SLSSSG++MAG
Sbjct: 63 DDGQTTEEAEERSPTPTRQDVAMLKAAMRREHLQRMVPGTLTPDPWRSIFYGRGRPTDVGPCRSLSSSGHSMAG 136
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16976.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| D7FLY7_ECTSI | 3.930e-16 | 55.41 | Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 14..17 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 18..195 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 4..13 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..17 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..3 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..17
score: 0.609 |
| None | No IPR available | TMHMM | TMhelix | | coord: 4..21 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig95.16976.1 ID=prot_C-linearis_contig95.16976.1|Name=mRNA_C-linearis_contig95.16976.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=196bp
MLDAGVFVAGFALVAFAWNLGRMNNVMKKCELEGCKTGCKSNEGCQSNDP
RGVENLEDWNWNVQCSENADPVARCVRNSHDSRVSINDPDGDEWNTARSA
LCVRNVQEVDFGAPSNDADGDGDETKTTECCGEGAQPTERDIVMFKEAKR
REHFEGMVPGSLTPYPWRSMYYGRGRPRCARRLSSLSSSGYNMAG* back to top
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