prot_C-linearis_contig95.16974.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16974.1
Unique Nameprot_C-linearis_contig95.16974.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length866
Homology
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 936 bits (2419), Expect = 0.000e+0
Identity = 616/733 (84.04%), Postives = 630/733 (85.95%), Query Frame = 0
Query:  125 LTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNS--APGSD-SIVAAMGAQTSXXXXXXXXXXXXXXXXXXXN-SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADGSYG 853
            LTFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRK AEPGL RGVRAVVLVPTRELC+QAR HLSELMHYCRDQVS+LALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGA+DG+L+QFYL L DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ    EFNRGIFDYLIVTD+SMDVQG GGV VE                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      K    G++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVLAKDEKQ RTL +VQSSQPSLAAPSLDGG     APGS  SIV AMG Q     XXXXXXXXXXXXXXXX  SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDL+VLRHDKSVLHPLRKLDHLKHIPDYLMP GLQTGEDPTQRQRKRIKRARGGAKRRQGQG DQ RRKDNDPLQTFEASELGADGSYG
Sbjct:   45 LTFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLPRGVRAVVLVPTRELCDQARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ----EFNRGIFDYLIVTDDSMDVQGVGGVAVEEDGDDGDSVSDESVGGDAPAGSIRVSASVALEGEDAMDQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------KGGHRGEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQSSQPSLAAPSLDGGXXXXXAPGSSGSIVTAMGPQAGGAVXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPPGLQTGEDPTQRQRKRIKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYG 751          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA)

HSP 1 Score: 649 bits (1675), Expect = 2.900e-221
Identity = 417/697 (59.83%), Postives = 467/697 (67.00%), Query Frame = 0
Query:  123 QALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEG-----AKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKR 814
            QA TF QHDFGLDRRLIKA AK GF+YPTLVQ+KCIPLALKGKDLLVRARTGSGKTAAF LPLLQK+L R+ AEP LA  VRAVVLVPTRELCEQ R  L ELM YCRD V +LALVDDNM+AQ+A LRDK D++VATPARLVAHLKAGN+ LKD VETLVVDEADLVLS+GY DDIR VT  LPK+CQGFLMSATLS ELE+LKRV+LHSPA+LKLEEG      + G L QF+L L +  DK LVVFAF+KLGLLEGKGLFFVN T++ YRLKLFLEQFH+RSAVLNAELPL SRLHIL+    EFNRGIFDYLI TD SMDV G GG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                      + E+G ARG+DFRGV FV+NVDFPP+  SYTHRVGRTARGGASGTALSL+  +   +   L +VQ+SQP+L     D          +++ A+G  T+                    S AQPAPLAFD+REIE+FRYRV D  KKVTRV VREARAAEL+ E++NS  L  +FK +  DLRVLRHDK+ L+P  +LDHLKHIP YLMP GL TGEDPT+RQ KR KR
Sbjct:    9 QAKTFAQHDFGLDRRLIKACAKAGFIYPTLVQSKCIPLALKGKDLLVRARTGSGKTAAFGLPLLQKLLARREAEPDLAAAVRAVVLVPTRELCEQVRGQLWELMAYCRDIVGLLALVDDNMSAQQAQLRDKPDIVVATPARLVAHLKAGNITLKDAVETLVVDEADLVLSYGYRDDIRHVTAHLPKVCQGFLMSATLSEELEELKRVILHSPAILKLEEGDASGGGEGGALLQFFLALREPADKNLVVFAFLKLGLLEGKGLFFVNATDACYRLKLFLEQFHIRSAVLNAELPLASRLHILE----EFNRGIFDYLIATDESMDV-GSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAGGPKG----------------------------------------------------------------------------------------------DAEYGVARGIDFRGVKFVMNVDFPPSARSYTHRVGRTARGGASGTALSLLCERAPAEVAALAEVQASQPALPLTEAD----------TLLGAIGTATADDGVSAQL------------SRAQPAPLAFDLREIEQFRYRVTDVAKKVTRVMVREARAAELRRELINSHALDAHFKSHPDDLRVLRHDKTALNPALRLDHLKHIPSYLMPAGLATGEDPTERQAKRKKR 584          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE)

HSP 1 Score: 611 bits (1576), Expect = 3.420e-207
Identity = 410/590 (69.49%), Postives = 423/590 (71.69%), Query Frame = 0
Query:  124 ALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQA-----------RQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLH-------------------------------------------ILQA--------RFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQ 651
            ALTFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRK AEPGL RGVRAVVLVPTRELCEQA           R HLSELMHYCRDQVS+LALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGA+DG+L+QFYL L DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRL                                            IL+A           EFNRGIFDYLIVTD+SMDVQG GGV VE                                               XXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXX                                G++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVLAKDEKQ RTL +VQ
Sbjct:   42 ALTFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLTRGVRAVVLVPTRELCEQASSSVCGVTHRARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKAIPPFSPTMAIREFNRGIFDYLIVTDDSMDVQGVGGVAVEEADDDEDSVSEESVGGDAPAGSIRVSASVALQEGEDAMDQSSSEEGEXXXXXXXXXXXXXXGKXXXXXXXXXXXXXXXXXXXXXTTGKADNXXXXXXXXXXGHR-----------------------------GEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQ 602          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: W7TVX7_9STRA (Putative atp-dependent rna helicase ddx56 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVX7_9STRA)

HSP 1 Score: 525 bits (1352), Expect = 6.180e-172
Identity = 356/713 (49.93%), Postives = 441/713 (61.85%), Query Frame = 0
Query:  123 QALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLAR--------------------------GVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDN----MAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNS-APGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDP 804
            +A TF   DFGLDRRLIKAV++MGF+YPTLVQ+K IPLA++GKDLLVRARTGSGKTAAFALP L KIL +KA E  L                            GV A++LVPT+ELC+Q  +   +L +YCRD VSV AL+       M+AQ+A LRD+ D+LVATP+RLV+HL+AGN+ LK +V+TLV+DEADL+LSFGY +D++ V   LP+I QG LMSATLS EL+DLKRVVLHSPAVLKLEEG  DG+L QFY+ L + D K L+VF F+KLG+LEGKGLFFVN  ++ YRLKLFLEQF +RSAVLNAELPLNSRLH LQ    EFNRGIFD+LI TD S+D                                                                       XXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             ++ +   E E+G  RG+DFR V+FV+NVDFP +  +YTHR+GRTARGGA+GTALSL+   D +++  L  VQ+SQP+L     D   +S  PG +  V A GA  +                       QP PLAFD++E+E FRYRVED  + VTR++V+EAR AE+K E++NSQ L  +F+EN  + ++LRHDK +L   R  +HLKH+PDYL+P G++ G DP
Sbjct:    6 EAGTFSAFDFGLDRRLIKAVSRMGFIYPTLVQSKAIPLAMEGKDLLVRARTGSGKTAAFALPTLHKILLQKAEESTLGMSHSVSTTPATRSSRKKPKAGAQSSPSGVLALILVPTKELCDQTYRTFVDLTYYCRDVVSVQALLGGGDAAAMSAQQALLRDQPDLLVATPSRLVSHLQAGNISLKASVQTLVMDEADLILSFGYEEDVKRVVAALPRIYQGILMSATLSPELDDLKRVVLHSPAVLKLEEGRTDGELLQFYVSLPEAD-KLLLVFVFLKLGVLEGKGLFFVNGLDACYRLKLFLEQFSIRSAVLNAELPLNSRLHTLQ----EFNRGIFDFLIATDESLDTA--------------------------------------------------------------CGPESEEXXXXXEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEVSAGRRGRRQSRGGGPAAGKEEGRPGEKEEEEDEKEYGVHRGIDFRAVNFVVNVDFPRSARAYTHRIGRTARGGANGTALSLLNKDDAREQEVLAAVQASQPALPPSEGDTLADSLGPGGE--VGATGALRT-----------------------QPTPLAFDLKELEGFRYRVEDVRRAVTRMAVKEARLAEIKQELLNSQALKTHFQENPHEFQILRHDKGILPSHRVQEHLKHVPDYLLPDGMRVGADP 626          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A5D6XSV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV1_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 2.060e-167
Identity = 369/730 (50.55%), Postives = 457/730 (62.60%), Query Frame = 0
Query:  126 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRK---AAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADGSY 852
            +F   DFGLDRRL KAVAK+ FV+ TLVQ  CIPLA++GKDLLVRARTGSGKTAAFALPLL KIL++K   ++   +   V+A+VLVPT+EL EQ R+H++ELM+YC D VS+LAL   +M AQ+A LRD  DV+VATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DGKL Q++L +    DK L+++A IKLG+++GK +FFVN TE++YRLKLF EQF ++SAVLNAELP NSR HI++    EFNRG+FDYLI TD+S+D                                                                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +K  ++  +G +RGVDFRGV+FV+NVDFP +V +YTHR+GRTARGGA+GTALSLV   D KQ R L +VQ+SQ  +   + D                                           AQPA LAFD+ E++ FRYRVED  + VT V+VREA+ A++K E++NS KL  +F  N  DL +L HDK++    R   HL  +PDYL+P  LQ    P ++ R   KR RGG       G D  RR DNDPL TF  ++   DG++
Sbjct:   16 SFAASDFGLDRRLTKAVAKLQFVHATLVQTHCIPLAMQGKDLLVRARTGSGKTAAFALPLLHKILQQKQDQSSAGAMLPSVKALVLVPTKELVEQIRKHMAELMYYCSDVVSLLALGGQSMNAQQALLRDVPDVVVATPGRLVAHLEAGNIKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQSFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYFLAV-PAADKDLLLYALIKLGVVQGKVIFFVNSTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIE----EFNRGLFDYLIATDDSVD-----------------------------------------------------------------------------------RDVGEASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKRPRDEAYGVSRGVDFRGVNFVINVDFPKSVRAYTHRIGRTARGGANGTALSLVGRGDSKQARALARVQASQKPVLTATKD-----------------------------------------VLAQPAELAFDLAEVDCFRYRVEDVRRAVTGVAVREAQLADVKKEMLNSDKLVAHFAANPRDLNILEHDKAI-GTARVQMHLATVPDYLVPLALQAAPPPKKKGRV-TKRVRGGG------GADGKRRTDNDPLHTFTHADADGDGAH 608          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A2D4BSN8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSN8_PYTIN)

HSP 1 Score: 511 bits (1317), Expect = 4.260e-167
Identity = 393/720 (54.58%), Postives = 473/720 (65.69%), Query Frame = 0
Query:  127 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRK---AAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRI--KRARGGAKRRQGQGQDQARRKDNDPLQTF 841
            F   DFGLD RL KAVAKM FVY TLVQ  CIPLA++GKDLLVRARTGSGKTAAFALP+L KIL+ K   A+       V+A+VLVPT+EL EQ R+H+SELM+YCRD VSVL L   +M+AQ+A LRD  D++VATP RLVAHL+AGN+ LK++V+T+V+DEADLVLSFGY +DIR++   LPK CQ F MSATLS ELE LKR VLH+ AV+KLEEGA DG+L Q+YL +   D K L+++A +KLG++ GK LFFVN TE++YRLKLF EQF ++S VLNAELP NSRLHI++    E+NRG+FDYLI TD+S+D +  G V  + XXXXXXXXXXXXXXXXXXXXXXXX XXX             XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               + TK  ++  +G +RGVDFRGV+FV+NVDFP +V SYTHR+GRTARGGA+GTALSLV   D K  R L +VQ SQ  +   S D                                           AQPA LAFD++EI+ FRYRVED  + VTRV+VREAR A++K EI+NS KLA +F+ N  DL +L+HDK++    R   HL  IPDYL+P  LQ     T +++K+   KRAR           D ARR DNDPL TF
Sbjct:   20 FASCDFGLDTRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFALPMLHKILQHKDDEASRTSARPSVKALVLVPTKELVEQTRKHISELMYYCRDIVSVLGLGGQSMSAQQALLRDVPDIVVATPGRLVAHLEAGNLALKESVQTVVIDEADLVLSFGYGEDIRSIYNHLPKACQTFCMSATLSPELEKLKRSVLHNAAVVKLEEGASDGRLQQYYLSVPGTD-KDLLLYALLKLGVVHGKVLFFVNSTEAAYRLKLFFEQFLIKSVVLNAELPHNSRLHIIE----EYNRGLFDYLIATDDSVD-RDVGEVSDDEXXXXXXXXXXXXXXXXXXXXXXXXMXXXIEADTDDEKTAVSXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALAKKPAASA------------------------------------RGTKRPRDEGYGVSRGVDFRGVNFVINVDFPRSVRSYTHRIGRTARGGANGTALSLVAQADPKDERALQRVQRSQQPIRTASND-----------------------------------------VLAQPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREARLADVKKEILNSDKLASHFEANPRDLNILQHDKAI-GTARVQPHLATIPDYLVPVTLQAAVPQTNQKKKKHDHKRAR---------TTDGARRTDNDPLHTF 646          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: M4BKX7_HYAAE (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=M4BKX7_HYAAE)

HSP 1 Score: 510 bits (1314), Expect = 7.740e-167
Identity = 368/723 (50.90%), Postives = 448/723 (61.96%), Query Frame = 0
Query:  127 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGAD 849
            F +  FGLDRRL KAVAKM FV+ TLVQ  CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K  +   A  VRA+VLVPT+EL EQ R+HL ELM+YC+D VS+LAL   +M AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL +    DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++     FNRG+FDYLI TD+S+D    G                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                XXXXXXXXXXXXX         +   G +  +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV  +D K+ R L +VQ+ Q ++ + S D           ++A                              QPA LAFD++EI+ FRYRVED  + VTRV+VREA+ A++K EI+NS++LA +F+ N  DL +L HDK V+       HL  IPDYL+P  LQ    P + ++K  KR R           D  RR DNDPL TF A ++  D
Sbjct:   17 FTECAFGLDRRLTKAVAKMQFVHATLVQLHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQTKVQDAAAAAAVRALVLVPTKELVEQTRRHLLELMYYCQDTVSLLALGGQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRKIVNALPKACQTFCMSATLSPELETLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-KAADKDLLLYALLRLGVVSGKVIFFVNSTPAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIEG----FNRGLFDYLIATDDSVDRDEVGD--------------------------------EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADVPGEVSSSERAKVEESNINEEGDNPGGDDSENEDEVIDSDKDEESXXXXXXXXXXXXXKQRNETAGSKHDRGDDKSYGVSRGVDFRGVKFVINVDFPKSVRAYTHRIGRTARGGASGTALSLVAKEDSKEERALKRVQAKQQAVRSESND-----------VIA------------------------------QPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADVKKEILNSERLAAHFEANPRDLNMLEHDK-VVGSAPVQPHLATIPDYLVPIELQPPA-PARTKKKHNKRQRLA---------DGKRRTDNDPLHTFVAPDVSDD 650          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A662YEI0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEI0_9STRA)

HSP 1 Score: 508 bits (1309), Expect = 4.190e-166
Identity = 402/718 (55.99%), Postives = 480/718 (66.85%), Query Frame = 0
Query:  127 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEAS 844
            F  ++FGLDRRL KAVAKM FV+ TLVQ  CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K         VRA+VLVPT+EL EQ R+HL ELM+YC D VS+LAL   +M+AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +D+RA+   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL + D  DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++    EFNRG+FDYLI TD+S+D                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXX            KR ++  E  +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV   D KQ R L +VQ+ Q ++ + S D                                           AQPA LAFD++E++ FRYRVED  + VTRV+VREA+ A++K E++NS +LA +F+ N  DL +L HDK V+   R   HL  IPDYL+P  LQ    P + ++K  KR R  + +         RR DNDPL TF AS
Sbjct:   19 FAAYEFGLDRRLTKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQLKQDAATSEPAVRALVLVPTKELVEQTRRHLLELMYYCSDVVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDVRAIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-DAADKDLLLYALLRLGVVHGKVIFFVNTTATAYRLKLFFEQFVIKSAVLNAQLPHNSRQHIIE----EFNRGLFDYLIATDDSVD------------------------------------RDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDGKEDSEGEXXXXXXXXXXXXXXXXEPQEEAKKTAGSKRPRADDEA-YGVSRGVDFRGVQFVINVDFPTSVRAYTHRIGRTARGGASGTALSLVAKGDAKQERALKRVQARQQAVRSESND-----------------------------------------VLAQPAELAFDLKEVDCFRYRVEDVRRAVTRVAVREAQLADVKKEMLNSDRLAAHFEANPRDLNMLEHDK-VVGSARVQPHLATIPDYLVPIALQPAA-PQRTKKKPNKRQRLASGK---------RRTDNDPLHTFTAS 642          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA)

HSP 1 Score: 508 bits (1308), Expect = 4.320e-166
Identity = 378/723 (52.28%), Postives = 458/723 (63.35%), Query Frame = 0
Query:  127 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGAD 849
            F   +FGLDRRL KAVAKM FV+ TLVQ  CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K   P     VRA+VLVPT+EL EQ R+H+ ELM+YC+D VS+LAL   +M AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL +    DK L+++A ++LG++ GK +FFVN T+++YRLKLF EQF ++SAVLNA+LP NSR HI++    EFNRG+FDYLI TD+S+D    G                                            XXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXX               XXXXXX       KR ++  E  +G +RGVDFRGV FV+NVD P +V +YTHR+GRTARGGASGTALSLV  +D K+ R L +VQ+ Q ++ + + D           ++A                              QPA LAFD++EI+ FRYRVED  + VTRV+VREA+ A++K E++NS++LA YF+ N  DL VL HDK V+       HL  IPDYL+P  LQ    P + ++K  KR R           D  RR DNDPL TF A +   D
Sbjct:   17 FAACEFGLDRRLSKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQHKQDAPASDSAVRALVLVPTKELVEQTRRHMIELMYYCQDTVSLLALGSQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLSV-KAVDKDLLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIE----EFNRGLFDYLIATDDSVDRDEVGD------------------------------------------EXXXXXXXXXXXXXXXXXXXXXXXXSDTDSDAVKEDVEEVEXXXXXXXXXXXXXXXXXXXXXESDKGEAVKNDNGADXXXXXXEKTTVSAKRGRADDEG-YGVSRGVDFRGVQFVINVDLPKSVRAYTHRIGRTARGGASGTALSLVCKEDPKEERALKRVQAKQQAVRSEAND-----------VIA------------------------------QPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADIKKEMLNSERLAAYFEANPRDLNVLEHDK-VVGSAPVQPHLATIPDYLVPLELQPPA-PARTKKKSNKRQRLA---------DGKRRTDNDPLHTFVAPDASDD 639          
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A8K1FD86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD86_PYTOL)

HSP 1 Score: 507 bits (1306), Expect = 1.250e-165
Identity = 396/721 (54.92%), Postives = 477/721 (66.16%), Query Frame = 0
Query:  126 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARG---VRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLG--DKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTF 841
            TF   DFGLD RL KAVAKM FVY TLVQ  CIPLA++GKDLLVRARTGSGKTAAFALPLL K+L+ K  +   A     ++A+VLVPT+EL EQ R+H+SELM+YCRD VS+L L   +M AQ+A LRD  D+++ATP RLVAHL AGN+ LKD+V+T+V+DEADLVLSFGY +DIR +   LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DGKL Q+YL +   DKD   L+++A IKLG++ GK +FFVN T+++YRLKLF EQF ++S VLNAELP NSR HI++    E+NRG+FDYLI TD+S+D                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXX        + TK  ++  +G +RGVDFRGV+FV+NVDFP +V SYTHR+GRTARGGA GTALSLV   + K++R L +VQ+SQ  + A S D                                            QPA LAFD++EI+ FRYRVED  + VT V+VREAR A++K EI+NS KL+ +F+ N  DL +L+HDK++    R   HL  IPDYL+P  LQ      ++ +K  KR R G        QD  RR DNDPL TF
Sbjct:   15 TFASCDFGLDTRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFALPLLHKLLQHKQDQSSAAAAKPSIKALVLVPTKELVEQTRKHMSELMYYCRDVVSLLGLGGQSMNAQQALLRDIPDIVIATPGRLVAHLTAGNLSLKDSVQTVVIDEADLVLSFGYGEDIRTIYNHLPKACQTFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYYLSVPVLDKD---LLLYALIKLGVVHGKVIFFVNSTDAAYRLKLFFEQFLIKSVVLNAELPHNSRQHIIE----EYNRGLFDYLIATDDSVD------------------------------------------RDVGEASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVMDXXXXXXXXXXXXXXXXXXXXXXXXXKQTTKAKARGTKRPRDEAYGVSRGVDFRGVNFVINVDFPRSVRSYTHRIGRTARGGAHGTALSLVTLSEPKEKRALDRVQASQQPIRAASND-----------------------------------------LLQQPAELAFDLKEIDCFRYRVEDVRRAVTGVAVREARLADVKKEILNSDKLSTHFEANPRDLNILQHDKAI-GTARVQPHLATIPDYLVPISLQAAVAQNKKPKKNHKRMRTG-------NQDGKRRMDNDPLHTF 637          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE7_ECTSI0.000e+084.04DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDE1_9STRA2.900e-22159.83DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6H5KX88_9PHAE3.420e-20769.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TVX7_9STRA6.180e-17249.93Putative atp-dependent rna helicase ddx56 n=1 Tax=... [more]
A0A5D6XSV1_9STRA2.060e-16750.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4BSN8_PYTIN4.260e-16754.58Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
M4BKX7_HYAAE7.740e-16750.90Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
A0A662YEI0_9STRA4.190e-16655.99Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6VU95_9STRA4.320e-16652.28Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A8K1FD86_PYTOL1.250e-16554.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 389..627
e-value: 3.5E-16
score: 69.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 361..627
e-value: 4.0E-17
score: 62.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 592..666
score: 8.273
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 146..351
e-value: 1.7E-40
score: 150.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 158..337
score: 26.297
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 152..325
e-value: 8.2E-39
score: 133.2
NoneNo IPR availableGENE3D3.40.50.300coord: 82..340
e-value: 3.5E-62
score: 211.8
NoneNo IPR availablePANTHERPTHR24031:SF96ATP-DEPENDENT RNA HELICASE DDX56-RELATEDcoord: 147..809
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 147..809
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 127..155
score: 8.186
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 130..337
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 349..651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:230948..239916 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16974.1mRNA_C-linearis_contig95.16974.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 230948..239917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16974.1 ID=prot_C-linearis_contig95.16974.1|Name=mRNA_C-linearis_contig95.16974.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=866bp
LAISGIQIAKVRHLLPSAAHKRNKNPTYYSAVSLPPSTPNVQHPDSAKSN
STQHRHTRRCNRQASSLSFPAMVRPKAKSPGKDGTKKRKELERQEKEQQL
TANAGAGATPADDDQAEQQQEQQALTFMQHDFGLDRRLIKAVAKMGFVYP
TLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLA
RGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAAL
RDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIR
AVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQ
FYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHV
RSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPV
EEEEEEREDDGGALVTGSFSIVADGAAAAAAAAASSGGQGEDEMDEASSS
GEGSEGSEAEEDGGGVDDDDDSDDDDKDEDDDGSDGSDSKEGEEEEEEEE
EGSAATKKQQQQQQQKKKKEAAGASSSSSKRTKSGQEPEFGAARGVDFRG
VSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQV
QSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSADGGGAAAAAVAAVGG
GGGNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEI
VNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQT
GEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADG
SYGVRGPGGAPREGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase