mRNA_C-linearis_contig95.16974.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI) HSP 1 Score: 936 bits (2419), Expect = 0.000e+0 Identity = 616/733 (84.04%), Postives = 630/733 (85.95%), Query Frame = 1 Query: 373 LTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNS--APGSD-SIVAAMGAQTSXXXXXXXXXXXXXXXXXXXN-SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADGSYG 2559 LTFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRK AEPGL RGVRAVVLVPTRELC+QAR HLSELMHYCRDQVS+LALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGA+DG+L+QFYL L DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ EFNRGIFDYLIVTD+SMDVQG GGV VE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K G++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVLAKDEKQ RTL +VQSSQPSLAAPSLDGG APGS SIV AMG Q XXXXXXXXXXXXXXXX SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDL+VLRHDKSVLHPLRKLDHLKHIPDYLMP GLQTGEDPTQRQRKRIKRARGGAKRRQGQG DQ RRKDNDPLQTFEASELGADGSYG Sbjct: 45 LTFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLPRGVRAVVLVPTRELCDQARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ----EFNRGIFDYLIVTDDSMDVQGVGGVAVEEDGDDGDSVSDESVGGDAPAGSIRVSASVALEGEDAMDQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------KGGHRGEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQSSQPSLAAPSLDGGXXXXXAPGSSGSIVTAMGPQAGGAVXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPPGLQTGEDPTQRQRKRIKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYG 751
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA) HSP 1 Score: 649 bits (1675), Expect = 2.900e-221 Identity = 417/697 (59.83%), Postives = 467/697 (67.00%), Query Frame = 1 Query: 367 QALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEG-----AKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKR 2442 QA TF QHDFGLDRRLIKA AK GF+YPTLVQ+KCIPLALKGKDLLVRARTGSGKTAAF LPLLQK+L R+ AEP LA VRAVVLVPTRELCEQ R L ELM YCRD V +LALVDDNM+AQ+A LRDK D++VATPARLVAHLKAGN+ LKD VETLVVDEADLVLS+GY DDIR VT LPK+CQGFLMSATLS ELE+LKRV+LHSPA+LKLEEG + G L QF+L L + DK LVVFAF+KLGLLEGKGLFFVN T++ YRLKLFLEQFH+RSAVLNAELPL SRLHIL+ EFNRGIFDYLI TD SMDV G GG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + E+G ARG+DFRGV FV+NVDFPP+ SYTHRVGRTARGGASGTALSL+ + + L +VQ+SQP+L D +++ A+G T+ S AQPAPLAFD+REIE+FRYRV D KKVTRV VREARAAEL+ E++NS L +FK + DLRVLRHDK+ L+P +LDHLKHIP YLMP GL TGEDPT+RQ KR KR Sbjct: 9 QAKTFAQHDFGLDRRLIKACAKAGFIYPTLVQSKCIPLALKGKDLLVRARTGSGKTAAFGLPLLQKLLARREAEPDLAAAVRAVVLVPTRELCEQVRGQLWELMAYCRDIVGLLALVDDNMSAQQAQLRDKPDIVVATPARLVAHLKAGNITLKDAVETLVVDEADLVLSYGYRDDIRHVTAHLPKVCQGFLMSATLSEELEELKRVILHSPAILKLEEGDASGGGEGGALLQFFLALREPADKNLVVFAFLKLGLLEGKGLFFVNATDACYRLKLFLEQFHIRSAVLNAELPLASRLHILE----EFNRGIFDYLIATDESMDV-GSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAGGPKG----------------------------------------------------------------------------------------------DAEYGVARGIDFRGVKFVMNVDFPPSARSYTHRVGRTARGGASGTALSLLCERAPAEVAALAEVQASQPALPLTEAD----------TLLGAIGTATADDGVSAQL------------SRAQPAPLAFDLREIEQFRYRVTDVAKKVTRVMVREARAAELRRELINSHALDAHFKSHPDDLRVLRHDKTALNPALRLDHLKHIPSYLMPAGLATGEDPTERQAKRKKR 584
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE) HSP 1 Score: 611 bits (1576), Expect = 3.420e-207 Identity = 410/590 (69.49%), Postives = 423/590 (71.69%), Query Frame = 1 Query: 370 ALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQA-----------RQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLH-------------------------------------------ILQA--------RFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQ 1953 ALTFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRK AEPGL RGVRAVVLVPTRELCEQA R HLSELMHYCRDQVS+LALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGA+DG+L+QFYL L DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRL IL+A EFNRGIFDYLIVTD+SMDVQG GGV VE XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX G++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVLAKDEKQ RTL +VQ Sbjct: 42 ALTFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLTRGVRAVVLVPTRELCEQASSSVCGVTHRARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKAIPPFSPTMAIREFNRGIFDYLIVTDDSMDVQGVGGVAVEEADDDEDSVSEESVGGDAPAGSIRVSASVALQEGEDAMDQSSSEEGEXXXXXXXXXXXXXXGKXXXXXXXXXXXXXXXXXXXXXTTGKADNXXXXXXXXXXGHR-----------------------------GEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQ 602
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: W7TVX7_9STRA (Putative atp-dependent rna helicase ddx56 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVX7_9STRA) HSP 1 Score: 525 bits (1352), Expect = 6.180e-172 Identity = 356/713 (49.93%), Postives = 441/713 (61.85%), Query Frame = 1 Query: 367 QALTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLAR--------------------------GVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDN----MAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNS-APGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDP 2412 +A TF DFGLDRRLIKAV++MGF+YPTLVQ+K IPLA++GKDLLVRARTGSGKTAAFALP L KIL +KA E L GV A++LVPT+ELC+Q + +L +YCRD VSV AL+ M+AQ+A LRD+ D+LVATP+RLV+HL+AGN+ LK +V+TLV+DEADL+LSFGY +D++ V LP+I QG LMSATLS EL+DLKRVVLHSPAVLKLEEG DG+L QFY+ L + D K L+VF F+KLG+LEGKGLFFVN ++ YRLKLFLEQF +RSAVLNAELPLNSRLH LQ EFNRGIFD+LI TD S+D XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ + E E+G RG+DFR V+FV+NVDFP + +YTHR+GRTARGGA+GTALSL+ D +++ L VQ+SQP+L D +S PG + V A GA + QP PLAFD++E+E FRYRVED + VTR++V+EAR AE+K E++NSQ L +F+EN + ++LRHDK +L R +HLKH+PDYL+P G++ G DP Sbjct: 6 EAGTFSAFDFGLDRRLIKAVSRMGFIYPTLVQSKAIPLAMEGKDLLVRARTGSGKTAAFALPTLHKILLQKAEESTLGMSHSVSTTPATRSSRKKPKAGAQSSPSGVLALILVPTKELCDQTYRTFVDLTYYCRDVVSVQALLGGGDAAAMSAQQALLRDQPDLLVATPSRLVSHLQAGNISLKASVQTLVMDEADLILSFGYEEDVKRVVAALPRIYQGILMSATLSPELDDLKRVVLHSPAVLKLEEGRTDGELLQFYVSLPEAD-KLLLVFVFLKLGVLEGKGLFFVNGLDACYRLKLFLEQFSIRSAVLNAELPLNSRLHTLQ----EFNRGIFDFLIATDESLDTA--------------------------------------------------------------CGPESEEXXXXXEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEVSAGRRGRRQSRGGGPAAGKEEGRPGEKEEEEDEKEYGVHRGIDFRAVNFVVNVDFPRSARAYTHRIGRTARGGANGTALSLLNKDDAREQEVLAAVQASQPALPPSEGDTLADSLGPGGE--VGATGALRT-----------------------QPTPLAFDLKELEGFRYRVEDVRRAVTRMAVKEARLAEIKQELLNSQALKTHFQENPHEFQILRHDKGILPSHRVQEHLKHVPDYLLPDGMRVGADP 626
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A5D6XSV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV1_9STRA) HSP 1 Score: 510 bits (1314), Expect = 2.060e-167 Identity = 369/730 (50.55%), Postives = 457/730 (62.60%), Query Frame = 1 Query: 376 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRK---AAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGADGSY 2556 +F DFGLDRRL KAVAK+ FV+ TLVQ CIPLA++GKDLLVRARTGSGKTAAFALPLL KIL++K ++ + V+A+VLVPT+EL EQ R+H++ELM+YC D VS+LAL +M AQ+A LRD DV+VATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY +DIR + LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DGKL Q++L + DK L+++A IKLG+++GK +FFVN TE++YRLKLF EQF ++SAVLNAELP NSR HI++ EFNRG+FDYLI TD+S+D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +K ++ +G +RGVDFRGV+FV+NVDFP +V +YTHR+GRTARGGA+GTALSLV D KQ R L +VQ+SQ + + D AQPA LAFD+ E++ FRYRVED + VT V+VREA+ A++K E++NS KL +F N DL +L HDK++ R HL +PDYL+P LQ P ++ R KR RGG G D RR DNDPL TF ++ DG++ Sbjct: 16 SFAASDFGLDRRLTKAVAKLQFVHATLVQTHCIPLAMQGKDLLVRARTGSGKTAAFALPLLHKILQQKQDQSSAGAMLPSVKALVLVPTKELVEQIRKHMAELMYYCSDVVSLLALGGQSMNAQQALLRDVPDVVVATPGRLVAHLEAGNIKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQSFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYFLAV-PAADKDLLLYALIKLGVVQGKVIFFVNSTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIE----EFNRGLFDYLIATDDSVD-----------------------------------------------------------------------------------RDVGEASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKRPRDEAYGVSRGVDFRGVNFVINVDFPKSVRAYTHRIGRTARGGANGTALSLVGRGDSKQARALARVQASQKPVLTATKD-----------------------------------------VLAQPAELAFDLAEVDCFRYRVEDVRRAVTGVAVREAQLADVKKEMLNSDKLVAHFAANPRDLNILEHDKAI-GTARVQMHLATVPDYLVPLALQAAPPPKKKGRV-TKRVRGGG------GADGKRRTDNDPLHTFTHADADGDGAH 608
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A2D4BSN8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSN8_PYTIN) HSP 1 Score: 511 bits (1317), Expect = 4.260e-167 Identity = 393/720 (54.58%), Postives = 473/720 (65.69%), Query Frame = 1 Query: 379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRK---AAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRI--KRARGGAKRRQGQGQDQARRKDNDPLQTF 2523 F DFGLD RL KAVAKM FVY TLVQ CIPLA++GKDLLVRARTGSGKTAAFALP+L KIL+ K A+ V+A+VLVPT+EL EQ R+H+SELM+YCRD VSVL L +M+AQ+A LRD D++VATP RLVAHL+AGN+ LK++V+T+V+DEADLVLSFGY +DIR++ LPK CQ F MSATLS ELE LKR VLH+ AV+KLEEGA DG+L Q+YL + D K L+++A +KLG++ GK LFFVN TE++YRLKLF EQF ++S VLNAELP NSRLHI++ E+NRG+FDYLI TD+S+D + G V + XXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + TK ++ +G +RGVDFRGV+FV+NVDFP +V SYTHR+GRTARGGA+GTALSLV D K R L +VQ SQ + S D AQPA LAFD++EI+ FRYRVED + VTRV+VREAR A++K EI+NS KLA +F+ N DL +L+HDK++ R HL IPDYL+P LQ T +++K+ KRAR D ARR DNDPL TF Sbjct: 20 FASCDFGLDTRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFALPMLHKILQHKDDEASRTSARPSVKALVLVPTKELVEQTRKHISELMYYCRDIVSVLGLGGQSMSAQQALLRDVPDIVVATPGRLVAHLEAGNLALKESVQTVVIDEADLVLSFGYGEDIRSIYNHLPKACQTFCMSATLSPELEKLKRSVLHNAAVVKLEEGASDGRLQQYYLSVPGTD-KDLLLYALLKLGVVHGKVLFFVNSTEAAYRLKLFFEQFLIKSVVLNAELPHNSRLHIIE----EYNRGLFDYLIATDDSVD-RDVGEVSDDEXXXXXXXXXXXXXXXXXXXXXXXXMXXXIEADTDDEKTAVSXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALAKKPAASA------------------------------------RGTKRPRDEGYGVSRGVDFRGVNFVINVDFPRSVRSYTHRIGRTARGGANGTALSLVAQADPKDERALQRVQRSQQPIRTASND-----------------------------------------VLAQPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREARLADVKKEILNSDKLASHFEANPRDLNILQHDKAI-GTARVQPHLATIPDYLVPVTLQAAVPQTNQKKKKHDHKRAR---------TTDGARRTDNDPLHTF 646
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: M4BKX7_HYAAE (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=M4BKX7_HYAAE) HSP 1 Score: 510 bits (1314), Expect = 7.740e-167 Identity = 368/723 (50.90%), Postives = 448/723 (61.96%), Query Frame = 1 Query: 379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGAD 2547 F + FGLDRRL KAVAKM FV+ TLVQ CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K + A VRA+VLVPT+EL EQ R+HL ELM+YC+D VS+LAL +M AQ+A LRD DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR + LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL + DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++ FNRG+FDYLI TD+S+D G XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX + G + +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV +D K+ R L +VQ+ Q ++ + S D ++A QPA LAFD++EI+ FRYRVED + VTRV+VREA+ A++K EI+NS++LA +F+ N DL +L HDK V+ HL IPDYL+P LQ P + ++K KR R D RR DNDPL TF A ++ D Sbjct: 17 FTECAFGLDRRLTKAVAKMQFVHATLVQLHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQTKVQDAAAAAAVRALVLVPTKELVEQTRRHLLELMYYCQDTVSLLALGGQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRKIVNALPKACQTFCMSATLSPELETLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-KAADKDLLLYALLRLGVVSGKVIFFVNSTPAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIEG----FNRGLFDYLIATDDSVDRDEVGD--------------------------------EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADVPGEVSSSERAKVEESNINEEGDNPGGDDSENEDEVIDSDKDEESXXXXXXXXXXXXXKQRNETAGSKHDRGDDKSYGVSRGVDFRGVKFVINVDFPKSVRAYTHRIGRTARGGASGTALSLVAKEDSKEERALKRVQAKQQAVRSESND-----------VIA------------------------------QPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADVKKEILNSERLAAHFEANPRDLNMLEHDK-VVGSAPVQPHLATIPDYLVPIELQPPA-PARTKKKHNKRQRLA---------DGKRRTDNDPLHTFVAPDVSDD 650
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A662YEI0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEI0_9STRA) HSP 1 Score: 508 bits (1309), Expect = 4.190e-166 Identity = 402/718 (55.99%), Postives = 480/718 (66.85%), Query Frame = 1 Query: 379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEAS 2532 F ++FGLDRRL KAVAKM FV+ TLVQ CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K VRA+VLVPT+EL EQ R+HL ELM+YC D VS+LAL +M+AQ+A LRD DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +D+RA+ LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL + D DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++ EFNRG+FDYLI TD+S+D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX KR ++ E +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV D KQ R L +VQ+ Q ++ + S D AQPA LAFD++E++ FRYRVED + VTRV+VREA+ A++K E++NS +LA +F+ N DL +L HDK V+ R HL IPDYL+P LQ P + ++K KR R + + RR DNDPL TF AS Sbjct: 19 FAAYEFGLDRRLTKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQLKQDAATSEPAVRALVLVPTKELVEQTRRHLLELMYYCSDVVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDVRAIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-DAADKDLLLYALLRLGVVHGKVIFFVNTTATAYRLKLFFEQFVIKSAVLNAQLPHNSRQHIIE----EFNRGLFDYLIATDDSVD------------------------------------RDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDGKEDSEGEXXXXXXXXXXXXXXXXEPQEEAKKTAGSKRPRADDEA-YGVSRGVDFRGVQFVINVDFPTSVRAYTHRIGRTARGGASGTALSLVAKGDAKQERALKRVQARQQAVRSESND-----------------------------------------VLAQPAELAFDLKEVDCFRYRVEDVRRAVTRVAVREAQLADVKKEMLNSDRLAAHFEANPRDLNMLEHDK-VVGSARVQPHLATIPDYLVPIALQPAA-PQRTKKKPNKRQRLASGK---------RRTDNDPLHTFTAS 642
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA) HSP 1 Score: 508 bits (1308), Expect = 4.320e-166 Identity = 378/723 (52.28%), Postives = 458/723 (63.35%), Query Frame = 1 Query: 379 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARGVRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLGDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTFEASELGAD 2547 F +FGLDRRL KAVAKM FV+ TLVQ CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K P VRA+VLVPT+EL EQ R+H+ ELM+YC+D VS+LAL +M AQ+A LRD DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR + LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DGKL QFYL + DK L+++A ++LG++ GK +FFVN T+++YRLKLF EQF ++SAVLNA+LP NSR HI++ EFNRG+FDYLI TD+S+D G XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXX KR ++ E +G +RGVDFRGV FV+NVD P +V +YTHR+GRTARGGASGTALSLV +D K+ R L +VQ+ Q ++ + + D ++A QPA LAFD++EI+ FRYRVED + VTRV+VREA+ A++K E++NS++LA YF+ N DL VL HDK V+ HL IPDYL+P LQ P + ++K KR R D RR DNDPL TF A + D Sbjct: 17 FAACEFGLDRRLSKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQHKQDAPASDSAVRALVLVPTKELVEQTRRHMIELMYYCQDTVSLLALGSQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLSV-KAVDKDLLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIE----EFNRGLFDYLIATDDSVDRDEVGD------------------------------------------EXXXXXXXXXXXXXXXXXXXXXXXXSDTDSDAVKEDVEEVEXXXXXXXXXXXXXXXXXXXXXESDKGEAVKNDNGADXXXXXXEKTTVSAKRGRADDEG-YGVSRGVDFRGVQFVINVDLPKSVRAYTHRIGRTARGGASGTALSLVCKEDPKEERALKRVQAKQQAVRSEAND-----------VIA------------------------------QPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADIKKEMLNSERLAAYFEANPRDLNVLEHDK-VVGSAPVQPHLATIPDYLVPLELQPPA-PARTKKKSNKRQRLA---------DGKRRTDNDPLHTFVAPDASDD 639
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Match: A0A8K1FD86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD86_PYTOL) HSP 1 Score: 507 bits (1306), Expect = 1.250e-165 Identity = 396/721 (54.92%), Postives = 477/721 (66.16%), Query Frame = 1 Query: 376 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKAAEPGLARG---VRAVVLVPTRELCEQARQHLSELMHYCRDQVSVLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGAKDGKLAQFYLGLG--DKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQARFCEFNRGIFDYLIVTDNSMDVQGFGGVPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKSGQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLAKDEKQRRTLHQVQSSQPSLAAPSLDGGGNSAPGSDSIVAAMGAQTSXXXXXXXXXXXXXXXXXXXNSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLRVLRHDKSVLHPLRKLDHLKHIPDYLMPRGLQTGEDPTQRQRKRIKRARGGAKRRQGQGQDQARRKDNDPLQTF 2523 TF DFGLD RL KAVAKM FVY TLVQ CIPLA++GKDLLVRARTGSGKTAAFALPLL K+L+ K + A ++A+VLVPT+EL EQ R+H+SELM+YCRD VS+L L +M AQ+A LRD D+++ATP RLVAHL AGN+ LKD+V+T+V+DEADLVLSFGY +DIR + LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DGKL Q+YL + DKD L+++A IKLG++ GK +FFVN T+++YRLKLF EQF ++S VLNAELP NSR HI++ E+NRG+FDYLI TD+S+D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX + TK ++ +G +RGVDFRGV+FV+NVDFP +V SYTHR+GRTARGGA GTALSLV + K++R L +VQ+SQ + A S D QPA LAFD++EI+ FRYRVED + VT V+VREAR A++K EI+NS KL+ +F+ N DL +L+HDK++ R HL IPDYL+P LQ ++ +K KR R G QD RR DNDPL TF Sbjct: 15 TFASCDFGLDTRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFALPLLHKLLQHKQDQSSAAAAKPSIKALVLVPTKELVEQTRKHMSELMYYCRDVVSLLGLGGQSMNAQQALLRDIPDIVIATPGRLVAHLTAGNLSLKDSVQTVVIDEADLVLSFGYGEDIRTIYNHLPKACQTFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYYLSVPVLDKD---LLLYALIKLGVVHGKVIFFVNSTDAAYRLKLFFEQFLIKSVVLNAELPHNSRQHIIE----EYNRGLFDYLIATDDSVD------------------------------------------RDVGEASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVMDXXXXXXXXXXXXXXXXXXXXXXXXXKQTTKAKARGTKRPRDEAYGVSRGVDFRGVNFVINVDFPRSVRSYTHRIGRTARGGAHGTALSLVTLSEPKEKRALDRVQASQQPIRAASND-----------------------------------------LLQQPAELAFDLKEIDCFRYRVEDVRRAVTGVAVREARLADVKKEILNSDKLSTHFEANPRDLNILQHDKAI-GTARVQPHLATIPDYLVPISLQAAVAQNKKPKKNHKRMRTG-------NQDGKRRMDNDPLHTF 637 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig95.16974.1 >prot_C-linearis_contig95.16974.1 ID=prot_C-linearis_contig95.16974.1|Name=mRNA_C-linearis_contig95.16974.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=866bp LAISGIQIAKVRHLLPSAAHKRNKNPTYYSAVSLPPSTPNVQHPDSAKSNback to top mRNA from alignment at C-linearis_contig95:230948..239917+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig95.16974.1 ID=mRNA_C-linearis_contig95.16974.1|Name=mRNA_C-linearis_contig95.16974.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8970bp|location=Sequence derived from alignment at C-linearis_contig95:230948..239917+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig95:230948..239917+ >mRNA_C-linearis_contig95.16974.1 ID=mRNA_C-linearis_contig95.16974.1|Name=mRNA_C-linearis_contig95.16974.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5196bp|location=Sequence derived from alignment at C-linearis_contig95:230948..239917+ (Chordaria linearis ClinC8C monoicous)back to top |