prot_C-linearis_contig95.16964.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16964.1
Unique Nameprot_C-linearis_contig95.16964.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length308
Homology
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: A0A6H5J809_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J809_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 2.100e-122
Identity = 186/238 (78.15%), Postives = 206/238 (86.55%), Query Frame = 0
Query:   71 TAALP----PVDNFPTSRGRVMGLGLSGWLGLAVAAQPGLALDPIRKAQEQIRIRAQEEFDNVEALASPEAGKTIQPVLTLVPIVALRLQLDEVESNLKDPRRFGDALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEATDMAKASLARKRKG 304
            T+++P    P +  PTSR R +GLG++    LAVA  PGLALDP+RK QEQ+RIRAQEEFDNVEALASPE GKT+QPVL LVPI+ LRLQLDEVESNLKDPR FG AL ILQ QDFQK+DIKRVFNAYSDNIYYLP S+REN+YLQGGATPS+RQTLQYLLRNDVIDNVEALTAEI+YLIRE++    GEADTDEKD+RMYLGKCKQ FDKYLGMV QNEIDEATDMAK +LA KRKG
Sbjct:   62 TSSIPSMSLPAEGGPTSRNRAIGLGVASLFSLAVAPTPGLALDPVRKVQEQLRIRAQEEFDNVEALASPEGGKTLQPVLALVPIITLRLQLDEVESNLKDPRLFGAALTILQAQDFQKKDIKRVFNAYSDNIYYLPDSDRENKYLQGGATPSSRQTLQYLLRNDVIDNVEALTAEISYLIRERE--VGGEADTDEKDLRMYLGKCKQSFDKYLGMVLQNEIDEATDMAKVALANKRKG 297          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: D8LLI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI5_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 4.680e-119
Identity = 179/227 (78.85%), Postives = 195/227 (85.90%), Query Frame = 0
Query:   76 PVDNFPTSRGRVMGLGLSGWLGLAVAAQPGLALDPIRKAQEQIRIRAQEEFDNVEALASPEAGKTIQPVLTLVPIVALRLQLDEVESNLKDPRRFGDALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAA--AGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEATDMAKASLAR 300
            P +  PTSR R +GLG++    LAVA  PGL LDP+RK QEQ+RIRAQEEFDNVEALASPE GKTIQPVL LVPI+ LRLQLDEVE+NLKDPRRFG AL ILQ QDFQK+DIKRVFNAYSDNIYYLP S+REN+YLQGGATPS+RQTLQYLLRNDVIDNVEALTAEIAYLIRE++       EADTDEKD+RMYLGKCKQ FDKYLGMV QNEIDEATDMAK  + R
Sbjct:    4 PAEGGPTSRSRAIGLGMASLFSLAVAPTPGLGLDPVRKVQEQLRIRAQEEFDNVEALASPEGGKTIQPVLALVPIITLRLQLDEVENNLKDPRRFGAALTILQAQDFQKKDIKRVFNAYSDNIYYLPDSDRENKYLQGGATPSSRQTLQYLLRNDVIDNVEALTAEIAYLIRERESGGEDGSEADTDEKDLRMYLGKCKQGFDKYLGMVLQNEIDEATDMAKLVVDR 230          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: A0A835ZF78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF78_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.070e-35
Identity = 80/167 (47.90%), Postives = 104/167 (62.28%), Query Frame = 0
Query:  132 LASPEAGKTIQPVLTLVPIVALRLQLDEVESNLKDPRRFG--DALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEATDMAKA 296
            LA P   KT+ PVL LVPIV LR+ LD VES LK     G   AL +L    +  ++IKR FN YSDNIY   GS R N YL GGA P++++T QYLLRN+V+ +V+ LTAE+AYL+R  D    G  DT   D+  YL   K+ FD YL +    ++D A ++A+A
Sbjct:    3 LADPTGRKTLSPVLALVPIVRLRMGLDLVESWLKLNTTEGWQRALEVLSSSAYSAKEIKRQFNRYSDNIYIEVGSARANAYLDGGAMPTSKETTQYLLRNEVLAHVDELTAELAYLLR--DGGGVGGGDT--ADLYTYLSAAKKSFDDYLQLAPPLDLDGAAEVARA 165          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: A0A7R9WN96_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN96_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.600e-27
Identity = 89/246 (36.18%), Postives = 127/246 (51.63%), Query Frame = 0
Query:   63 HQQCSVPPTAALPPVDNFPTSRGR----VMGLGLSGWLGLAVAAQPGLALDPIRKAQ-------EQIRIRAQEEFDNVEALASPEAGKT-------IQPVLTLVPIVALRLQLDEVESNLKDPRRFGDALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEA 290
            HQ  S   +A+   +    T R       +GLGL     +A+   P  A D + K         EQIRI  Q E DN++     EAG           P L L+PI+ +  +L +V+  ++D  R+ DAL I+Q + ++K   K+ FNAY DNIYY    +R N YL GGATP T Q+L YLLRNDV+ NVE L AE+ YL++      +GE +T+  D+  +         KYL +V   E+++A
Sbjct:   90 HQDISTSSSASALNMQKESTDRRSFVQAAVGLGL-----IAMNPTPAQARDDLFKKNPLTNPMLEQIRIWEQAEADNIKYSGELEAGDAGNKGKVDAYPKL-LMPILEIDYELTQVKKLVRDESRWPDALTIMQQKKYEKIPFKKAFNAYGDNIYYSD-PDRANVYLGGGATPKTEQSLAYLLRNDVLTNVENLRAELEYLMK------SGEKETE--DLYKFADIATNAMKKYLAIVPPGELEQA 320          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: A0A7S3Q034_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q034_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.840e-26
Identity = 83/237 (35.02%), Postives = 123/237 (51.90%), Query Frame = 0
Query:   71 TAALPPVDNFPTSRGRVMGLGLSGWLGLAVAAQPGLALDPI-------RKAQEQIRIRAQEEFDNVEALASPEAGKTI---QPVLTLVPIVALRLQLDEVESNLKDPRRFGDALA----ILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEATDM 293
            + A+   + F  SR  +M   L   + LA+      A D +        K  E+IRI  Q E DN++       G  I   Q    LVPI+ ++ + DE+++ +  P   GD LA    IL  + ++K   K+ FNA++DNIYY    +R N YL GGA P   Q++ YL+RNDV+ NVE L AE+ YLI+E    A  E +T+  D+ +Y+  CK    KYL +V   E+  A ++
Sbjct:   81 STAMQMKEEFSMSRRSIMSAVLPAAVALALNPVKASARDELFKPNPLTNKVLEKIRILEQAEADNIQYGGELAPGSPIGRDQYAKLLVPIMIIQKEFDELDTLVHMPN--GDGLAQADIILSKKQYEKLQFKKTFNAFADNIYYSD-PDRANAYLGGGAVPKNEQSIAYLIRNDVLTNVENLQAEVTYLIKEI--KAGNEMETE--DLYLYVQTCKDGMVKYLDLVPPGEVKIAKEI 310          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: B5Y3I0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3I0_PHATC)

HSP 1 Score: 113 bits (282), Expect = 5.870e-26
Identity = 79/213 (37.09%), Postives = 117/213 (54.93%), Query Frame = 0
Query:   97 GLAVAAQPGLALDPIRKAQ-------EQIRIRAQEEFDNVEALASPEAG------KTIQPVLTLVPIVALRLQLDEVESNLKDPR-RFGDALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEATDMAK 295
            GL ++ +P LA D + +         E+IRI  Q E D+++     E G      K       LVPI+ +  +LDEVE      R  +  A  IL+ + +QK + K+ FNAYSDNIYY    +R N YL GGATP T Q+L YLLRND++ NVEAL +EI YL++E  E++        +D+ +Y     +   +Y+G+V   E+ +A ++ K
Sbjct:   62 GLWLSNEPALAKDDVFRGNPLTNSVLEKIRIWEQAEADDLKYGGELERGDAGNKGKVEAYPRLLVPILQMANELDEVERICLGSRDSWAQAQNILKQKKYQKIEFKKQFNAYSDNIYYSD-PDRANLYLGGGATPKTEQSLAYLLRNDILTNVEALQSEIEYLLKEPSESS--------EDLVLYATTANRAMKRYMGIVPPGELVKARELIK 265          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: B8CC65_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC65_THAPS)

HSP 1 Score: 103 bits (257), Expect = 2.150e-22
Identity = 73/189 (38.62%), Postives = 104/189 (55.03%), Query Frame = 0
Query:  116 EQIRIRAQEEFDNVE---ALASPEAGKT--------IQPVLTLVPIVA-LRLQLDEVESNLKDP--RRFGDALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEA 290
            E++RI  Q+E DN++    LAS     T        +QP+LT+   +A +   LD+ + N KD     F  A AI++   F K + K+ FNA++DNIYY    +R N YL GGA P   Q+L YLLRNDV+ NVE L AE+ YL++E +   AGE   +  D+   +   K    KYL +V   E++ A
Sbjct:   68 EKLRIWNQDEADNIQYGGELASGSFKPTAFDQYVQLLQPILTVEQSIATIDGLLDKTKLNNKDDYVTAFKKADAIIEQPIFDKINFKKAFNAFADNIYYSD-PDRANLYLGGGAIPKPTQSLAYLLRNDVLTNVEDLRAELTYLMKELNRGGAGEGGVELDDLYSIVKMAKDGMVKYLDLVPPKELEAA 255          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: A0A7S0Q4I5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4I5_9EUKA)

HSP 1 Score: 103 bits (256), Expect = 2.490e-22
Identity = 68/191 (35.60%), Postives = 97/191 (50.79%), Query Frame = 0
Query:   62 THQQCSVPPTAALPPVDNFPTSRGRVMGLGLSGWLGLAVAAQPGLALD-PIRKAQ-----EQIRIRAQEEFDNVE--ALASPEAGKTIQPVLTLVPIVALRLQLDEVESNLKDPRRFGDALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAY 244
            TH  C+V      P      T R  + G  L   L  + A   G  L  P R+       E++RI  Q+E D V+     +P    +  P L L+PIV ++  L + +  L D  ++   + +L    F   + KR+FNAY+DNIYY  GSE  N YL GGATPST+QT QYLLRN+ +  +E +  E+ +
Sbjct:   17 THSACNVDALTCDPTTARSATRRQVLHGAALGSLLLPSCATASGFVLAVPPREGLTSRWLEKLRIALQDEADAVQYGGELAPGGPPSTVPGLLLIPIVQMQRVLQKSKPLLDDEGKWPALIEVLTSGPFTTIEFKRIFNAYADNIYYKAGSEEANVYLLGGATPSTKQTNQYLLRNEALKQIEEIVDELKF 207          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: A0A448ZLZ7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLZ7_9STRA)

HSP 1 Score: 102 bits (255), Expect = 6.600e-22
Identity = 70/189 (37.04%), Postives = 96/189 (50.79%), Query Frame = 0
Query:  116 EQIRIRAQEEFDNVEALASPEAGKT-------IQPVLTLVPIVALRLQLDEVES-------NLKDPRRFGDALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEA 290
            EQ+RI  Q E DN++     E G           P L LVPI+ +  +L+E+ +       N         ALAILQ   ++K + K+ FN Y DNIYY    +R N YL GGATP T Q++ YLLRNDV+ N+E L AE+ YLI+ ++           +D+  Y   C     KYL  V   ++ EA
Sbjct:   97 EQVRIMEQAEKDNIKYGGELERGDAGNKGKVDAYPSL-LVPILKIDKELNEIRTLVRSGGENKPSNEAMSQALAILQQPTYEKVNFKKTFNKYGDNIYYSD-PDRANLYLGGGATPKTEQSIAYLLRNDVLTNMENLRAELEYLIKSEENEI--------EDLYSYADICTSAMKKYLAQVPPQQLKEA 275          
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Match: A0A7S2IB95_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IB95_9STRA)

HSP 1 Score: 102 bits (255), Expect = 7.500e-22
Identity = 75/204 (36.76%), Postives = 104/204 (50.98%), Query Frame = 0
Query:   99 AVAAQPGLALDPIRKAQ-------EQIRIRAQEEFDNV----EALASPEAGKTIQPVLTLVPIVALRLQLDEVESNLKDPRRFG--DALAILQIQDFQKRDIKRVFNAYSDNIYYLPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKDEAAAG--EADTDEKDMRMYLGKCKQDFDKYLGMVFQNEI 287
            +  A+P  A D + K         E++RI  Q E DN+    E       G+     L LVPI+ +   L      ++ P   G   A  IL   +F+K   K++FNA++DNIYY    +R N YL GGATP   Q++ YLLRNDV+ NVEAL AEI YLI++K    AG  E   + +D+ +Y         KYL +V   E+
Sbjct:   81 SAVAEPASARDELFKPNPLTNPVLEKVRIWNQAEADNISYGGELAPGSIKGRAAYAKL-LVPILGIEKDLLAANELVRVPDGKGLTQANDILSKSEFEKISFKKIFNAFADNIYYSD-PDRANLYLGGGATPKNEQSIAYLLRNDVLTNVEALQAEITYLIKQKKNIEAGTEEGPLETEDLYVYAQTAVDGMKKYLELVPPGEL 282          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J809_9PHAE2.100e-12278.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLI5_ECTSI4.680e-11978.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZF78_9STRA3.070e-3547.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9WN96_9STRA5.600e-2736.18Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3Q034_9STRA5.840e-2635.02Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B5Y3I0_PHATC5.870e-2637.09Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8CC65_THAPS2.150e-2238.62Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0Q4I5_9EUKA2.490e-2235.60Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A448ZLZ7_9STRA6.600e-2237.04Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2IB95_9STRA7.500e-2236.76Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.779

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:102800..105183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16964.1mRNA_C-linearis_contig95.16964.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 102767..105960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16964.1 ID=prot_C-linearis_contig95.16964.1|Name=mRNA_C-linearis_contig95.16964.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=308bp
MFLMHRLLCVVVAAVVTRTHAFHAHTASSFTGASLGEATTHDQVRLPKPP
QKTGNSRRGRATHQQCSVPPTAALPPVDNFPTSRGRVMGLGLSGWLGLAV
AAQPGLALDPIRKAQEQIRIRAQEEFDNVEALASPEAGKTIQPVLTLVPI
VALRLQLDEVESNLKDPRRFGDALAILQIQDFQKRDIKRVFNAYSDNIYY
LPGSERENQYLQGGATPSTRQTLQYLLRNDVIDNVEALTAEIAYLIREKD
EAAAGEADTDEKDMRMYLGKCKQDFDKYLGMVFQNEIDEATDMAKASLAR
KRKGQQQ*
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