prot_C-linearis_contig94.16955.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig94.16955.1
Unique Nameprot_C-linearis_contig94.16955.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length834
Homology
BLAST of mRNA_C-linearis_contig94.16955.1 vs. uniprot
Match: D7G4U9_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4U9_ECTSI)

HSP 1 Score: 600 bits (1546), Expect = 3.120e-200
Identity = 442/865 (51.10%), Postives = 521/865 (60.23%), Query Frame = 0
Query:    1 MDRRLQSSLEKKTRVG-WQTRVYRLERGYLSGWADVSSAAAHEEPSRVTCLFQGDQVATLVDQGDKRFKLDFSWDGAKTLQLRANNSAMKDAWVSLLHATLKEAESQIKATGSVFAYGGTAKHEQDEAYEEAAYLKTNRFLAAYVVDEQSRASYVNDLLNEGFQYVGDRAGGGGDVRRACAGARAAIAELLALMEDFKEEMDGVEELRRGKQSGEDSSSHQLGPSVAAPKIQRFCEEHMSLVGRTISSRLMLELSPFMDSSVAGTSAAPTDSTRAELVATRKNLDEAYEATDRIVILGTRAWFMDIRDCFLDCAALEQASAAPPSPPPAIATQTTGLGSPPRGPAEVNS---TAADEPASSLPQ-GSTRRSSSKALLQVSSALSAAKAATKGGASRMGSSLSMKGRGTGKVTADAGPAAAAESKANSERDGGAGGGGRVSSRAGVSMSIPGVFRRGSRGPPEKEQTP--AAPSSPSPPTNVSPRGS---------------------VNRGSGGKASKPPDIEERERSDLFGGSSHSPGNXXXXXXXXXXXXXXXXXXXXXXAGQTGADAGSSSSAVASEPRTAASGTSQSXXXXXXXXXXXXXXXXXXXXXKEKREFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPAASTAAQIGDPAVSVSRDAEAAPKPKAGGGKRRFAGGGFSGPTPAASQ----PTAQLPGDNPFAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGRGADEAVPAWAASAXXXXXXXXXXXXXXXXEPPSSGGKGGSSGKSYGLGLAPPSRADQGRQVAAENSPFMTVDPAAPSARRPSQRRPGESGSRRAFGGGERLF 833
            MDR LQS LEK+TRVG WQ+RVYRLERGYLS W D  S AA ++P+R  CLF  +QVA L DQGDKRFKLDF WDG+KTLQLR++NSAMK AWV LL ATL EA SQI+A GSVFAYGG A+H +DEAYEEA YLKTNRFLAAYVVDEQSRASY+NDLLN+GF +VGDRAG   D   ACAG+R+AIAELLAL EDF +EM GVEELRRG Q G ++S  QL  +V APKI+RFCEE+MSLVGRTISSRLMLELSPFM++SVAG+S+APT+STRAELV TR+ LDEAY AT+++VILGTRAWF+DIR+ FLDCA LE AS+ PP+PPP +ATQT                    A+  + + P  GS RR S+KALLQVS+A + AKAATK GA+++G+S +  GR TGK    A  A  A  +  S  D  AG GG+V+S  GVSMSIPGVF+R SR   E E+      P+    P  +SPRGS                     V  G GGK   P + EE++RSDLFGGSS SP                         G+T +   +SS++ A  P      ++              XXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXX            +    +T A  G     +     A PK K  GGKRRFAGG FSGP    SQ    P+  + G+NPFA G                                  +    R  +E +PAWA  A                +P         S    G GLAPP       Q+AA+ SPFM  +P AP  RRPSQRRPGE+GSRRAFGGGERLF
Sbjct:    1 MDRSLQSGLEKRTRVGAWQSRVYRLERGYLSAWPDAVSVAAKQDPTRTECLFLDNQVAVLTDQGDKRFKLDFPWDGSKTLQLRSSNSAMKQAWVDLLRATLDEAGSQIRAIGSVFAYGGAAQHAKDEAYEEATYLKTNRFLAAYVVDEQSRASYINDLLNDGFHHVGDRAGSERDAHNACAGSRSAIAELLALTEDFMKEMRGVEELRRGTQ-GSETSEGQLDGAVTAPKIERFCEEYMSLVGRTISSRLMLELSPFMETSVAGSSSAPTESTRAELVGTRRRLDEAYAATEQVVILGTRAWFVDIREYFLDCAGLEIASSRPPTPPPEVATQTAAFSXXXXXXXXXXXXXXAGAEAQSRTTPSAGSARRPSAKALLQVSNAFAVAKAATKDGATKIGTSWNATGRSTGKAKNSASDADGAPVRGGSPADQ-AGAGGKVNSTRGVSMSIPGVFKRASRTGSEMEERSDLGKPADGRTPVTMSPRGSGGPTSVAGNQAVQSSDAEVGVVMEGRGGKPVSPAETEEQQRSDLFGGSSRSPS---------ASPRAHGGKNSPVRRGKTESVLNASSASTAVPP------SASEHVLSALVNPDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGNMKTDSRDGSTMVNTTVADEGQ----LKSVPAAIPKSKPSGGKRRFAGGVFSGPPQPPSQLNAAPSDGVQGENPFA-GASDATTMRREGTGATHKSVVGANETVSSSIRREELPKPPREVEEPLPAWATEAGANESVPDWAANSSMDKP---------SKPPSGYGLAPPXXXXXXXQLAADKSPFMQREPDAPPKRRPSQRRPGETGSRRAFGGGERLF 834          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig94.16955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4U9_ECTSI3.120e-20051.10PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..206
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 8..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig94contigC-linearis_contig94:475193..480270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig94.16955.1mRNA_C-linearis_contig94.16955.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig94 475193..480296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig94.16955.1 ID=prot_C-linearis_contig94.16955.1|Name=mRNA_C-linearis_contig94.16955.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=834bp
MDRRLQSSLEKKTRVGWQTRVYRLERGYLSGWADVSSAAAHEEPSRVTCL
FQGDQVATLVDQGDKRFKLDFSWDGAKTLQLRANNSAMKDAWVSLLHATL
KEAESQIKATGSVFAYGGTAKHEQDEAYEEAAYLKTNRFLAAYVVDEQSR
ASYVNDLLNEGFQYVGDRAGGGGDVRRACAGARAAIAELLALMEDFKEEM
DGVEELRRGKQSGEDSSSHQLGPSVAAPKIQRFCEEHMSLVGRTISSRLM
LELSPFMDSSVAGTSAAPTDSTRAELVATRKNLDEAYEATDRIVILGTRA
WFMDIRDCFLDCAALEQASAAPPSPPPAIATQTTGLGSPPRGPAEVNSTA
ADEPASSLPQGSTRRSSSKALLQVSSALSAAKAATKGGASRMGSSLSMKG
RGTGKVTADAGPAAAAESKANSERDGGAGGGGRVSSRAGVSMSIPGVFRR
GSRGPPEKEQTPAAPSSPSPPTNVSPRGSVNRGSGGKASKPPDIEERERS
DLFGGSSHSPGNSPRASPKTSPRRSPSRSPFAAPAGQTGADAGSSSSAVA
SEPRTAASGTSQSAAASVAGASSLPAAAPAPAARKEKREFAGGVWGGGGG
GGSSSVTAPQSAAMSSKDERVAGGEETAPAASTAAQIGDPAVSVSRDAEA
APKPKAGGGKRRFAGGGFSGPTPAASQPTAQLPGDNPFAAGGSGGGGDSG
GGGARVMGGGRTGAARRSSLGGGEEVSSGGRGADEAVPAWAASAGAEESV
PEWAASASASEPPSSGGKGGSSGKSYGLGLAPPSRADQGRQVAAENSPFM
TVDPAAPSARRPSQRRPGESGSRRAFGGGERLF*
back to top