prot_C-linearis_contig93.16925.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig93.16925.1
Unique Nameprot_C-linearis_contig93.16925.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length554
Homology
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 533 bits (1374), Expect = 8.380e-175
Identity = 313/510 (61.37%), Postives = 359/510 (70.39%), Query Frame = 0
Query:    1 MSMKDLMELHKKISKGQTGSSLARKEKFAEKFRALFEDGDCSKLFLGGRGGVATAGMVCVFTPAGVMVAWKLLPTPESVNDVVDFVRWFKVKPAFLCFDAACKLVPGLEKYCEGLLDVDGGRLHRDDKGHAVHAALGHVGNNRDSATRDIEACTQFKDRERTTDTEDVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPSVGVPSRQAATKALDALHRRGVRVLSLFEVLVFTYYWHLQHRAGAAGGXXXXXXXXXXXXXXXXGVGRLAVGVNGWVVHGTPGGGEEGGGVTHALAADFLRPVLVGLSGSRQASNLSRLPSWLDPKWIADENVETGLQGYAKAKEDFVVDGLKPLTSQARGRGRAIAVRGGIGFGRGVFALKGLELRLAPNAAPHATTTDD-KVAGYGAIFHDTRHQGHEGPPFPRKTRMGPDGHHESNHGEACREKYSGMTTCRDIAGVNLTRHESDHGRKAVYFRSINNMTLANFTYSLNVINELQNRGYNEMHLSVLL 509
            M  +DL +LHK +    + S L+RKE +  KFR LF DGDCSK FLGGRGGVATAGMVCVFTPAGVMVAWK+LPT ES NDVVDF+RW KVKP  L +DAACKLV  LEKYC  LL    G L RD +G+ V   L HVGNNR+SATR+  A T F+D  RTTD ED+YAV+ETA P+PGLQ +VD+ EA+  AA++   VG  S+  AT+ALDALHR GVRVLSLFEVLVFTYYWH +    A   XXXXXXXXXXXXXXXX                                          LSGSR+AS +S LPSWL    I++  +ETGL+ YAKAK DFVVD LKPLT++ R R  AIAVRGGIGFGR V+ALK LEL LA NAAPHATTT++ KV GY AIFHDTR++  EG P  R+ R+GPDGHHE+NHG  CR+ YSG+TTC+DI GVNLTRHESDHG K +Y RSINNMT  NFTYSL+VINELQNR YN   L  LL
Sbjct:  609 MPAEDLKKLHKVVFGTLSASGLSRKEDYITKFRPLFHDGDCSKQFLGGRGGVATAGMVCVFTPAGVMVAWKVLPTAESPNDVVDFMRWMKVKPYLLSYDAACKLVKELEKYCPALLKDKTGVLQRDGEGNVVFPELVHVGNNRNSATRETAART-FQDLPRTTDREDMYAVIETAGPRPGLQSEVDSDEALFWAAKFSKVVGGQSKLTATRALDALHRDGVRVLSLFEVLVFTYYWHRKAAGDATXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXXXXLSGSRRASRVSALPSWLHASCISEGELETGLRRYAKAKVDFVVDCLKPLTAEVRERA-AIAVRGGIGFGRDVYALKELELSLARNAAPHATTTEEGKVVGYDAIFHDTRYKNFEGDPIKREMRIGPDGHHENNHGPDCRKLYSGLTTCKDIGGVNLTRHESDHGVKVMYLRSINNMTFPNFTYSLSVINELQNRKYNRQLLDALL 1099          
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Match: A0A6H5JLJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLJ6_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 8.450e-114
Identity = 222/364 (60.99%), Postives = 257/364 (70.60%), Query Frame = 0
Query:    1 MSMKDLMELHKKISKGQTGSSLARKEKFAEKFRALFEDGDCSKLFLGGRGGVATAGMVCVFTPAGVMVAWKLLPTPESVNDVVDFVRWF---KVKPAFLCFDAACKLVPGLEKYCEGLLDVDGGRLHRDDKGHAVHAALGHVGNNRDSATRDIEACTQFKDRERTTDTEDVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPSVGVPSRQAATKALDALHRRGVRVLSLFEVLVFTYYWHLQHRAGAAGGXXXXXXXXXXXXXXXXGVGRLAVGVNGWVVHGTPGGGEEGGGVTHALAADFLRPVLVGLSGSRQASNLSRLPSWLDPKWIADENVETGLQGYAKAKEDFVVDGLKPLTSQARGR 361
            M  +DL +LHK +    + S L+RKE +  KFRALF DGDCSK FLGGRGGVATAGMVCVFTPAGV+VAWK+LPT ES N+VVDF+RW    KVKP  L +DAACKLV GLEKYC  LL+   G L RD +G+ V   L HVGNNR+SATR+  A T F+D +RTTD ED+ AV+ETA P PGLQ +VD  EA+L AA +   VG  S+  AT+ALDALHR GV  LSLFEVLVFTYYWH +     A  XXXXXXXXXXXXXXXX           WV    P  G+EGGG THA AA FL  VLVGLSGSRQAS +S LPSWL    I +  + TGL+ YAKAK DF+VD LK LT++A+ R
Sbjct:   87 MPAEDLKKLHKVVFGTLSASGLSRKEDYIAKFRALFHDGDCSKQFLGGRGGVATAGMVCVFTPAGVVVAWKVLPTAESPNNVVDFMRWMRWMKVKPYLLSYDAACKLVKGLEKYCPALLEDKTGVLQRDGEGNVVFPELAHVGNNRNSATRETAART-FQDLQRTTDREDMNAVIETAGPWPGLQSEVDPDEALLWAANFSKVVGGRSKLTATRALDALHRDGVCELSLFEVLVFTYYWHRKAAGDTAXXXXXXXXXXXXXXXXXX--------XXXWVAR-APLEGDEGGGFTHADAAGFLLRVLVGLSGSRQASKVSALPSWLHATCIPEGELATGLRRYAKAKVDFIVDCLKALTAEAKER 440          
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Match: A0A6H5KXC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC8_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.440e-39
Identity = 132/394 (33.50%), Postives = 187/394 (47.46%), Query Frame = 0
Query:  135 ALGHVGNNRDSATRDIEAC-TQFKDRERTTDTEDVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPSVGVPSRQAATKALDALHRR--GVRVLSLFEVLVFTYYWHLQHRAGAAGGXXXXXXXXXXXXXXXXGVGRLAVGVNGWVV----HGTPGGG---EEGGGVTHALAADFLRPVLVGLSGSRQASNLSRLPSWLDPKWIADENVET-------GLQGYAKAKEDFVVDGLKPLTSQARGRGRAIAVRGGIGF-GRGVFALKGLELRLAPNAAPHATTTDDKVAGYGAIFHDTRHQGHEGPPFPRKTR-----MGPDGHHESNHGEACREKYSGMTTCRDIAGVNLTRHESDHGRKAVYFRSINNMTLANFTYSLNVINELQNRGYNEMHL 505
            AL H+G+N  SA+  +EA         +     DVYA+   A    G Q  V+ Y+ +  + E    V      AAT+A+ AL  R  G+RVLSLF+ LVFTY W L++ A    G                    L +G  GW +    HG    G   E    V+   A   LR VL+   G+R       L  WL+     D +  T       GL  YA AK  F+ DG++P+  + R    + A+  G G  G GV+++  L++ LA +  PH +  + KVAGY  ++ D             K       +GPDG H  N  + C+ +YSG TTC ++AG+NL   E DH +KA+Y RS+N MT + FT++L V+NE QN+G N   L
Sbjct:   55 ALAHLGSN--SASTSVEAPQVSIHVPPKRYSKVDVYALNAAAQGDRG-QSQVNVYDLLHASDETQGPVPKAVYLAATRAVAALRDREAGIRVLSLFKALVFTYVW-LRNIAEDEPGM-------------------LEIGATGWTLRMPSHGVVPVGTIAESVDAVSTGDAEKHLREVLLVARGTRNGKGACLL-DWLNAGGFVDGDTSTLNATQVDGLHAYAAAKTKFMADGVQPIGEKERKIAES-AICCGTGLCGDGVYSIMALQIALAVDVPPHESAENFKVAGYDCVWQDNTFDDMSSEHVKYKMWQSGIFVGPDGPHAKNRSKECQRQYSGFTTCDELAGINLNPPEQDHSKKALYLRSLNTMTFSGFTFALRVLNERQNQGCNRKTL 423          
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Match: A0A6H5KCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.020e-38
Identity = 132/394 (33.50%), Postives = 189/394 (47.97%), Query Frame = 0
Query:  135 ALGHVGNNRDSATRDIEACTQFKDRERTTDTEDVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPSVGVPSRQAATKALDALHRRGVRVLSLFEVLVFTYYWHLQHRAGAAGGXXXXXXXXXXXXXXXXGVGRLAVGVNGWVV----HGTPGGG---EEGGGVTHALAADFLRPVLVGLSGSRQASNLSRLPSWLDPKWIADENVET-------GLQGYAKAKEDFVVDGLKPLTSQARGRGRAIAVRGGIGFGRGVFALKGLELRLAPNAAPHATTTDDKVAGYGAIFHDTRHQGHEGPPFPRKTRMGPDG-----HHESNHGEACREKYSGMTTCRDIAGVNLTRHESDHGRKAVYFRSINNMTLANFTYSLNVINELQNRGYNEMHLSVLL 509
            AL H+G+N  S T +    +     +R +   DVYA L+ A     +Q  V+ Y+ +  +AE    V      AAT+A+ AL + G+RV SL EVL+FTY W L++ A    G                    L VG  GW +    HG    G   E    V+ + A   L  VLV   G+R       LP W       D +  T       GL  YA AK  F+VDG++P+  + R    + A+R GIG G G+ ++  L++ LA +  P  +  + +VAGY  ++HDT     +      K +M   G      H +    A     SG TTC ++AG+NL  HE DH +KA+  RS+N MT +NFT++L VINE Q++G+N   L  LL
Sbjct:   72 ALAHLGSNGASTTVEAPQVSLPVPPKRDSKV-DVYA-LKAAAQGDRVQSQVNVYDLLHASAETQGPVPKAVNLAATRAVAALGKAGIRVNSLLEVLIFTYVW-LRNIAEDEPGM-------------------LEVGATGWTLRRPSHGVVPVGTTAESVDAVSTSDAEKHLLEVLVVARGARNGKGAC-LPDWFGAGDFVDGDTSTLCATQVDGLHAYAAAKTKFIVDGVQPIGEKERNIAES-AIRCGIGCGDGMHSIMVLQIALAVDVPPRESAKNFEVAGYDCVWHDTTFD--DKSSEHAKYKMWQSGILWAQTHLTRRTTARSASNSGFTTCDELAGINLNPHEQDHSKKALCLRSLNTMTFSNFTFALRVINERQDQGFNRKTLRTLL 439          
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Match: A0A6H5JN33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN33_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 2.360e-15
Identity = 83/274 (30.29%), Postives = 117/274 (42.70%), Query Frame = 0
Query:  135 ALGHVGNNRDSATRDIEACTQFKDRERTTDTEDVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPSVGVPSRQAATKALDALHRRGVRVLSLFEVLVFTYYWHLQHRAGAAGGXXXXXXXXXXXXXXXXGVGRLAVGVNGWVV----HGTPGGG---EEGGGVTHALAADFLRPVLVGLSGSRQASNLSRLPSWLDPKWIADENVET-------GLQGYAKAKEDFVVDGLKPLTSQARGRGRAIAVRGGIGFGRGVFALKGLELRLAPNAAPH 394
            AL H+G+N  S T  +EA   F       D++     L+ A     +Q  V+ Y+ +  +AE    V   +  AAT+A+ AL   G+RVLSLFEVLVFTY W                               L +G  GW +    HG    G   E    V+   A   +R VLV   G R       LP W       D    T       GL  YA AK  F+VDG++P+  + R    ++ +R GIG+  G +++  L++ LA +  PH
Sbjct:   62 ALAHLGSNNASTT--VEAPQVFLPVPPKRDSKVDLCALKAAAQGDRVQSQVNVYDLLHASAETQGPVPKAANLAATRAVAALWEAGIRVLSLFEVLVFTYVWLRNITEDEPD--------------------MLELGATGWTLRRPSHGVVPVGTTAESVDTVSTGAAEKHVREVLVVARGVRNGKGAC-LPDWFGAGDFVDGETSTLYAAQLDGLHAYAVAKTKFMVDGVQPIGEKERKIAESV-IRCGIGYAAGEYSIMALQIALAVDVPPH 311          
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Match: A0A6H5JT09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT09_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 5.870e-6
Identity = 58/190 (30.53%), Postives = 78/190 (41.05%), Query Frame = 0
Query:  167 DVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPSVGVPSRQAATKALDALHRRGVRVLSLFEVLVFTYYWHLQHRAGAAGGXXXXXXXXXXXXXXXXGVGRLAVGVNGWVVHGTPGG--GEEGGGVTHALAADFLRPVLVGLSGSRQASNLSRLPSWLDPKWIADENVET-------GLQGYAKAKEDFV 347
            DVYA L+ A     +Q  ++ Y+ +L +AE    V      AAT+A+ AL   G+RVL LFEVL+FTY W L++ A    G                    L +G  GW +   P G   E    V+   A   LR VLV   G+R       LP W       + +  T       GL  YA      +
Sbjct:   48 DVYA-LKAAAQGDRVQSQLNVYDLLLASAETQGPVPKAVNLAATRAVAALREAGIRVLFLFEVLIFTYVW-LRNIAEDEPGM-------------------LELGATGWTLRRLPVGTTAESVDAVSTGDAEKHLREVLVVARGARNGKGAC-LPDWFGAGDFVNGDTSTLYATQVDGLHAYAAVSASMI 215          
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Match: A0A6H5JGB2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB2_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.810e-5
Identity = 53/169 (31.36%), Postives = 72/169 (42.60%), Query Frame = 0
Query:   93 PAFLCFDAACKLVPGLEKYCEGLLDVDGGRLHRDDKG-------------------------HAVHAALGHVGNNRDSATRDIEACTQFKDRERTTDTEDVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPSVGVPSRQAATKALDALHRRGVRVLSLFEVLVFTYYW 236
            P    +DA CK V  +EK+  G+L   G      D G                              AL H+G+N  S T +    +     +R +   DVYA L+ A     +Q  V+ Y+ +  +AE    V      AAT+A+ AL   G+RVLS FEVLVFTY W
Sbjct:  250 PVLGMYDAGCKAVAHMEKHLPGVLQNRGRPTRLGDDGVGGGGSGYSNAASNDTEDGEPAPTPRIFLQALAHLGSNSASTTVEAPQVSLPVPPKRDSKV-DVYA-LKAAAQGDRVQNQVNVYDLLHASAETQGPVPEAVNLAATRAVAALREAGIRVLSFFEVLVFTYVW 416          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KPP3_9PHAE8.380e-17561.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLJ6_9PHAE8.450e-11460.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXC8_9PHAE2.440e-3933.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCW5_9PHAE2.020e-3833.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN33_9PHAE2.360e-1530.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT09_9PHAE5.870e-630.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGB2_9PHAE2.810e-531.36CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig93contigC-linearis_contig93:589453..594168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig93.16925.1mRNA_C-linearis_contig93.16925.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig93 587767..594734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig93.16925.1 ID=prot_C-linearis_contig93.16925.1|Name=mRNA_C-linearis_contig93.16925.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=554bp
MSMKDLMELHKKISKGQTGSSLARKEKFAEKFRALFEDGDCSKLFLGGRG
GVATAGMVCVFTPAGVMVAWKLLPTPESVNDVVDFVRWFKVKPAFLCFDA
ACKLVPGLEKYCEGLLDVDGGRLHRDDKGHAVHAALGHVGNNRDSATRDI
EACTQFKDRERTTDTEDVYAVLETANPQPGLQCDVDTYEAVLRAAEYFPS
VGVPSRQAATKALDALHRRGVRVLSLFEVLVFTYYWHLQHRAGAAGGTAG
AAVGAASGGAGGGGVGRLAVGVNGWVVHGTPGGGEEGGGVTHALAADFLR
PVLVGLSGSRQASNLSRLPSWLDPKWIADENVETGLQGYAKAKEDFVVDG
LKPLTSQARGRGRAIAVRGGIGFGRGVFALKGLELRLAPNAAPHATTTDD
KVAGYGAIFHDTRHQGHEGPPFPRKTRMGPDGHHESNHGEACREKYSGMT
TCRDIAGVNLTRHESDHGRKAVYFRSINNMTLANFTYSLNVINELQNRGY
NEMHLSVLLGGSRSTHHLVMWGVTLLCGPAAGVFAASHSCACLIALGNST
LFF*
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