prot_C-linearis_contig93.16916.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig93.16916.1
Unique Nameprot_C-linearis_contig93.16916.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length498
Homology
BLAST of mRNA_C-linearis_contig93.16916.1 vs. uniprot
Match: A0A6H5KBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF2_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 9.080e-33
Identity = 195/557 (35.01%), Postives = 233/557 (41.83%), Query Frame = 0
Query:    1 MMCCYGRLEGELRVVQGLETAREKMLLRLQRLHEKITTCQPNDGVPATALATAGEGA-----------------PASRSDQRRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSRQPSKRKGSAAPKAPSPFCLCLLASRSKQEVYLSLQAVSHARAALEGVEEGRGHTGRWCRWVSSALAAADAEGXXXXXXXXXXXRAAATTSPFPADTPTESLATSCLPPSASKTTHGGGDPEGGPVGSFDGVTPSPSSDSDAALHQKQQQRLARARALQEELERRVLATHEATAPVAPGETSAGG-VPALLAAM-----------EAGLRLQEKKFGGSVDSPGPAE--------------------------LAAVLRRVS-----EEVDARLGERPLTEALEEHRHXXXXXXXXXXXQHHLQQQPXXXXXXXXXXXXXPGEQPPPHESDMGFPSAFLSPEGSSSRKEQEREEAAPDLGGGTAGGGTVLNTFETKLPPNRHQHSALTAGESAAETGRGMTWAGVADLERSRRAHREKLEEILSACVGEMPFEPRGGGW 497
            MM CYG LE ELRVV+GLETAR++ML R++ L   +    P  G  A +L T   G                  P++ S  R               XXXXXXXXX         A   Q   RK    P   SPFCLCL+A RS  E+  SL  VS AR  L+ ++EGR H GRWCRW SSAL AA++               +      P DT +   A + +   A +     GD                    DA L Q           LQE LERRV     A  P A G  +AG  VP+ L+A             A +R        S   PG A                           L    R V+     E +D RLGE  LT  LEE R   XXXXXXXXX        XXXXXXXXXXXXX   +PP   +   FP      E S SR          DL G   G        E +L       +     +  A+ G G+ WAG + LERSR A+RE+LE +LSACV  MP EPRGGGW
Sbjct:  541 MMSCYGGLEAELRVVEGLETARQRMLRRMRSLFRDVAESHPGSGKVAASLRTIETGPGYQQXXXXXXXXXXXXXPSAMSTSRAGTADATAMPGRAGAXXXXXXXXXSATQPTTKTASRCQRPSRKKHTPPAEASPFCLCLVAGRSPGELSRSLAKVSRAREVLDALDEGREHAGRWCRWASSALVAAESAPPPRSGAVSGAAAGSRGAPRLPEDTASLIAAAATISEPA-EDNQATGDVR------------------DATLRQTW--------CLQEGLERRV----RAALPPAAGTPAAGSPVPSWLSAAIAMLEPTRRDGSAPMRTGRTYGHASAGPPGTARPRPNVGRTRTVPIPLLSAPPCVGCLCLTTTARIVAFVPDQEGIDLRLGEAALTTTLEEQRIQRXXXXXXXXXXXXX----XXXXXXXXXXXXXXXHRPPALHTRQAFPPTSAVEEVSCSR----------DLRGHDGGS-------EAQLLAGSSSPAESALWDRNADKGTGVEWAGSSALERSRVANRERLESLLSACVEAMPLEPRGGGW 1045          
BLAST of mRNA_C-linearis_contig93.16916.1 vs. uniprot
Match: D7G2T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T0_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 3.250e-19
Identity = 98/188 (52.13%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    1 MMCCYGRLEGELRVVQGLETAREKMLLRLQRLHEKITTCQPNDG-VPATALATAGEGAPASRSDQRRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------APSRQPSKRKGSAAPKAP-SPFCLCLLASRSKQEVYLSLQAVSHARAALEGVEEGRGHTGRWCRWVSSALAAAD 171
            MM CYG LEGELRVV+GLETAR++MLLR++ L   +   QP  G V A+   T     P          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               +  ++PS++K    P+A  SPFCLCL+A R   E+  SL  V+ AR  L+ ++EGR H GRWCRW SSAL AA+
Sbjct:  271 MMSCYGGLEGELRVVEGLETARQRMLLRMRSLFRDVAESQPGSGKVAASPRTTEARPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTTKTTSRCQRPSRKK--CTPRAEVSPFCLCLVACRPPGELSRSLAKVTRAREVLDALDEGREHAGRWCRWASSALVAAE 456          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBF2_9PHAE9.080e-3335.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T0_ECTSI3.250e-1952.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 463..483
NoneNo IPR availableCOILSCoilCoilcoord: 246..266
NoneNo IPR availableCOILSCoilCoilcoord: 15..35
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 68..407
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 68..407

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig93contigC-linearis_contig93:328716..331428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig93.16916.1mRNA_C-linearis_contig93.16916.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig93 328658..331782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig93.16916.1 ID=prot_C-linearis_contig93.16916.1|Name=mRNA_C-linearis_contig93.16916.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=498bp
MMCCYGRLEGELRVVQGLETAREKMLLRLQRLHEKITTCQPNDGVPATAL
ATAGEGAPASRSDQRRLQQQHHHHHHHQQQQQHQASPVAAAAAAATPPAP
SRQPSKRKGSAAPKAPSPFCLCLLASRSKQEVYLSLQAVSHARAALEGVE
EGRGHTGRWCRWVSSALAAADAEGSGVGGGGGSAERAAATTSPFPADTPT
ESLATSCLPPSASKTTHGGGDPEGGPVGSFDGVTPSPSSDSDAALHQKQQ
QRLARARALQEELERRVLATHEATAPVAPGETSAGGVPALLAAMEAGLRL
QEKKFGGSVDSPGPAELAAVLRRVSEEVDARLGERPLTEALEEHRHQHRQ
RQQQQRQQHHLQQQPHTRHPHQPRQHEHPGEQPPPHESDMGFPSAFLSPE
GSSSRKEQEREEAAPDLGGGTAGGGTVLNTFETKLPPNRHQHSALTAGES
AAETGRGMTWAGVADLERSRRAHREKLEEILSACVGEMPFEPRGGGW*
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