Homology
BLAST of mRNA_C-linearis_contig93.16915.1 vs. uniprot
Match:
A0A6H5KBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF2_9PHAE)
HSP 1 Score: 106 bits (264), Expect = 2.590e-23
Identity = 51/71 (71.83%), Postives = 57/71 (80.28%), Query Frame = 0
Query: 4 GAGAVVSLPVAMETCGYLLPLWGYRRSAFLETTKAGDTLETREILLALSWLTAKARLFHAYEQSSFVSPLP 74
GA A V LPV METCGYLLPLWGYRR AF+E KA D L+TRE+LLALSW+ AKA+ F A+EQS VSPLP
Sbjct: 378 GAAAEVPLPVVMETCGYLLPLWGYRRKAFIEGIKACDVLQTRELLLALSWMMAKAKAFPAFEQSRLVSPLP 448
BLAST of mRNA_C-linearis_contig93.16915.1 vs. uniprot
Match:
D7G2T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T0_ECTSI)
HSP 1 Score: 105 bits (262), Expect = 3.910e-23
Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0
Query: 3 VGAGAVVSLPVAMETCGYLLPLWGYRRSAFLETTKAGDTLETREILLALSWLTAKARLFHAYEQSSFVSPLP 74
+GA A V LPVAMETCG+LLP+WGYRR AF+E KA D L+TRE+LLALSW+ AKA++F A+EQ+ VSPLP
Sbjct: 107 LGASAEVPLPVAMETCGHLLPMWGYRRKAFIEGIKACDVLQTREVLLALSWMMAKAKVFPAFEQARLVSPLP 178
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16915.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
A G V G A G A V V S L P V A M E T C G Y L L P L W G Y R R S A F L E T T K A G D T L E T R E I L L A L S W L T A K A R L F H A Y E Q S S F V S P L P P E Q Q L Q Q Q H Q H H Q Q L Q P Y Q H L H H Q R Q P Q Y L Q Q A Q P Q P Q P R Q Q R D C Q P Q P L P F P T D P S E A P E I V R S A R D V F L A S L Q D E E Q V E Q D S W P H K Q L H H Q Q R W Q G A G D D N R E K G 20 40 60 80 100 120 140 160 180 Expect = 2.59e-23 / Id = 71.83 Expect = 3.91e-23 / Id = 68.06 Sequence A0A6H5KBF2_9PHAE D7G2T0_ECTSI
Match Name E-value Identity Description
A0A6H5KBF2_9PHAE 2.590e-23 71.83 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T0_ECTSI 3.910e-23 68.06 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
A G V G A G A V V S L P V A M E T C G Y L L P L W G Y R R S A F L E T T K A G D T L E T R E I L L A L S W L T A K A R L F H A Y E Q S S F V S P L P P E Q Q L Q Q Q H Q H H Q Q L Q P Y Q H L H H Q R Q P Q Y L Q Q A Q P Q P Q P R Q Q R D C Q P Q P L P F P T D P S E A P E I V R S A R D V F L A S L Q D E E Q V E Q D S W P H K Q L H H Q Q R W Q G A G D D N R E K G 20 40 60 80 100 120 140 160 180 Expect = 1.1E-6 / Score = 28.7 Score = Sequence PF14970 TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
IPR027996 Domain of unknown function DUF4509 PFAM PF14970 DUF4509 coord: 22..73 e-value: 1.1E-6 score: 28.7
None No IPR available TMHMM TMhelix coord: 5..27
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig93.16915.1 ID=prot_C-linearis_contig93.16915.1|Name=mRNA_C-linearis_contig93.16915.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=181bp AGVGAGAVVSLPVAMETCGYLLPLWGYRRSAFLETTKAGDTLETREILLA LSWLTAKARLFHAYEQSSFVSPLPPEQQLQQQHQHHQQLQPYQHLHHQRQ PQYLQQAQPQPQPRQQRDCQPQPLPFPTDPSEAPEIVRSARDVFLASLQD EEQVEQDSWPHKQLHHQQRWQGAGDDNREKG back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR027996 DUF4509