prot_C-linearis_contig93.16908.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig93.16908.1
Unique Nameprot_C-linearis_contig93.16908.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length222
Homology
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BLAST of mRNA_C-linearis_contig93.16908.1 vs. uniprot
Match: A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.880e-8
Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   85 LPSITSGRPGEARAAYIVQWTGYHPLEEHPELLAGALRGYDRCSVIVGGVDTGVQEGRVDG---DSVGACSS 153
            +P+ TSG  GE  A Y+VQWT +HPLE+H  LL+GAL G+DRC    GG +     G  D    DSV A S+
Sbjct:  285 IPASTSGSGGEVLAQYVVQWTDFHPLEDHSSLLSGALGGFDRCCS--GGCEASGVHGSSDARARDSVDASST 354
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BLAST of mRNA_C-linearis_contig93.16908.1 vs. uniprot
Match: D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.720e-7
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0 
Query:   85 LPSITSGRPGEARAAYIVQWTGYHPLEEHPELLAGALRGYDRCSVIVGGVDTGVQEGRVDG---DSVGACSS 153
            +P+ TSG  GE  A Y+VQWT +HPLE+H  LL+ AL G+DRC    GG +     G  D    DSV A S+
Sbjct:   15 IPASTSGPRGEVLAQYVVQWTDFHPLEDHNSLLSRALGGFDRCGS--GGCEASDVHGSSDARARDSVDASST 84
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K166_9PHAE1.880e-848.61Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7FUM0_ECTSI2.720e-747.22Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig93contigC-linearis_contig93:286891..287593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig93.16908.1mRNA_C-linearis_contig93.16908.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig93 285982..287761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig93.16908.1 ID=prot_C-linearis_contig93.16908.1|Name=mRNA_C-linearis_contig93.16908.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=222bp
MTRTSGAGEICRHDGWRAALTLSALAAQLSSNGVSSTSTIATPSPDYAFR
ESERASSTVGMVSPAVSTALPVAGDPVAAKSKFFLPSITSGRPGEARAAY
IVQWTGYHPLEEHPELLAGALRGYDRCSVIVGGVDTGVQEGRVDGDSVGA
CSSGGGSGDSGSSSSSSSSSRTTTTVATAAAGRWWREKALPPRGKNTPAT
SRWSAGFRCVNREQCQTTSTP*
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