Homology
BLAST of mRNA_C-linearis_contig93.16908.1 vs. uniprot
Match:
A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE)
HSP 1 Score: 64.7 bits (156), Expect = 1.010e-7
Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 406 LPSITSGRPGEARAAYIVQWTGYHPLEEHPELLAGALRGYDRCSVIVGGVDTGVQEGRVDG---DSVGACSS 612
+P+ TSG GE A Y+VQWT +HPLE+H LL+GAL G+DRC GG + G D DSV A S+
Sbjct: 285 IPASTSGSGGEVLAQYVVQWTDFHPLEDHSSLLSGALGGFDRCCS--GGCEASGVHGSSDARARDSVDASST 354
BLAST of mRNA_C-linearis_contig93.16908.1 vs. uniprot
Match:
D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI)
HSP 1 Score: 61.2 bits (147), Expect = 1.280e-6
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 406 LPSITSGRPGEARAAYIVQWTGYHPLEEHPELLAGALRGYDRCSVIVGGVDTGVQEGRVDG---DSVGACSS 612
+P+ TSG GE A Y+VQWT +HPLE+H LL+ AL G+DRC GG + G D DSV A S+
Sbjct: 15 IPASTSGPRGEVLAQYVVQWTDFHPLEDHNSLLSRALGGFDRCGS--GGCEASDVHGSSDARARDSVDASST 84
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16908.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.01e-7 / Id = 48.61 Expect = 1.28e-6 / Id = 47.22 Sequence A0A6H5K166_9PHAE D7FUM0_ECTSI
Match Name E-value Identity Description
A0A6H5K166_9PHAE 1.010e-7 48.61 Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more] D7FUM0_ECTSI 1.280e-6 47.22 Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 60.8 Seed ortholog evalue 9e-07 Seed eggNOG ortholog 2880.D7FUM0 Preferred name MBTPS1 KEGG ko ko:K08653 KEGG Pathway ko04141,map04141 Hectar predicted targeting category other localisation GOs GO:0000139,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005794,GO:0005795,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006606,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006972,GO:0006984,GO:0006986,GO:0006991,GO:0006996,GO:0007033,GO:0007040,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016485,GO:0016787,GO:0017038,GO:0017171,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0023052,GO:0030968,GO:0031090,GO:0031293,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031984,GO:0032933,GO:0033036,GO:0033365,GO:0033554,GO:0033619,GO:0034504,GO:0034613,GO:0034620,GO:0034976,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0036500,GO:0042175,GO:0042221,GO:0042538,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045540,GO:0045893,GO:0045935,GO:0045944,GO:0046890,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0062012,GO:0065007,GO:0070011,GO:0070013,GO:0070727,GO:0070887,GO:0071310,GO:0071501,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0080171,GO:0090181,GO:0098588,GO:0098791,GO:0098827,GO:0106118,GO:0140096,GO:1901564,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:2000112,GO:2001141 EggNOG free text desc. serine-type endopeptidase activity EggNOG OGs COG1404@1,KOG4266@2759 EC 3.4.21.112 COG Functional cat. O Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko01002,ko03110 Exons 3 Model size 987 Cds size 666 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930796.1967058-UTR-C-linearis_contig93:285981..286093 1622930796.1967058-UTR-C-linearis_contig93:285981..286093 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig93 285982..286093 + 1690881254.6938744-UTR-C-linearis_contig93:285981..286093 1690881254.6938744-UTR-C-linearis_contig93:285981..286093 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig93 285982..286093 + 1622930796.2169552-UTR-C-linearis_contig93:286849..286890 1622930796.2169552-UTR-C-linearis_contig93:286849..286890 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig93 286850..286890 + 1690881254.7116528-UTR-C-linearis_contig93:286849..286890 1690881254.7116528-UTR-C-linearis_contig93:286849..286890 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig93 286850..286890 + 1622930796.2798052-UTR-C-linearis_contig93:287593..287761 1622930796.2798052-UTR-C-linearis_contig93:287593..287761 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig93 287594..287761 + 1690881254.7446315-UTR-C-linearis_contig93:287593..287761 1690881254.7446315-UTR-C-linearis_contig93:287593..287761 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig93 287594..287761 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930796.2333431-CDS-C-linearis_contig93:286890..287402 1622930796.2333431-CDS-C-linearis_contig93:286890..287402 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig93 286891..287402 + 1690881254.7236478-CDS-C-linearis_contig93:286890..287402 1690881254.7236478-CDS-C-linearis_contig93:286890..287402 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig93 286891..287402 + 1622930796.2649713-CDS-C-linearis_contig93:287439..287593 1622930796.2649713-CDS-C-linearis_contig93:287439..287593 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig93 287440..287593 + 1690881254.7340622-CDS-C-linearis_contig93:287439..287593 1690881254.7340622-CDS-C-linearis_contig93:287439..287593 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig93 287440..287593 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig93.16908.1
>prot_C-linearis_contig93.16908.1 ID=prot_C-linearis_contig93.16908.1|Name=mRNA_C-linearis_contig93.16908.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=222bp
MTRTSGAGEICRHDGWRAALTLSALAAQLSSNGVSSTSTIATPSPDYAFR back to top mRNA from alignment at C-linearis_contig93:285982..287761+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig93.16908.1 ID=mRNA_C-linearis_contig93.16908.1|Name=mRNA_C-linearis_contig93.16908.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1780bp|location=Sequence derived from alignment at C-linearis_contig93:285982..287761+ (Chordaria linearis ClinC8C monoicous)CGAGGAGGGGGCCCCGGTAGCGGGCCTGGCAAGAGGAAAGAGGCGGGGCA
CGGGTACACCCGTGTCGGAGGGGAGGGGAGCGGCAAAGCCGGGATCGGAA
GCTCATCACGAG GTAGGGTGTTTAATTGGCGGCGTGAAAACAGCAGAGAG
AGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGCTGGTTTGTAC
ATACCCGCAGGCGACGGGGTTTTTGTGTACATAATCCAGGTAGAGCAGGC
CGATGCGTGGGTGTGTGGGGCGTCTCGTGGCTCGTGGCCCTCCGCAAAGA
CTCATAACTGAGGTCGCACGGCTTGCTTCAGGTGTTCTGGGCCAAGAGCG
CATGTCGTGAACCTCTCGCCAACAACAGCAGCAGCCCGCGTTTTGCACCG
ACAGCGGAGTATTATGCTGTCTCGCATGGGTCCCACTTTTCCAGGGTATC
TCCCCGCAACCCCGCTTCCGTCTACATCTAGGGCAAGTGTTCTGGTGTTT
TGGGGTCAGGGCTTTTCTGCTGCAAGGCTGTGCTGAAGCTGAAGTGTTTC
CCGTTTCTTGTATGGCGCCACAGCAGCAGCAGGTGTGTGTTCTTCAACCC
CACGCAGCAAACACCCTTTTCCTCGCCGAGCCGCCTTGCACTGGGAGCAC
CGCGCGATGGCCGAACGCCTGCCCCAGCGCGCGGGCGGGGCATTTCGTGC
GGCTGTCCGGGTGGTTGCCTCCCCTGCCGTGTAGGCTGTATTTTCCGGCA
ATATTGGAAGGTCACAGGTGTACTAACTAGTACAGCAGCACATGCTGCTG
CTGTTCGCCAAGCGATGTCTCCCACACCGGCATCCGCTCGTCGTCCCGCT
CGCACCACTCCTGCCCAGGAAAAAAGCTAGAGAGAGAGAGAGAGAGGGAG
ACTAAAGAC ATGACAAGAACCTCCGGCGCCGGCGAGATATGCCGGCACGA
TGGCTGGCGCGCCGCCCTCACCCTGTCGGCCCTGGCGGCCCAGCTTTCGT
CAAACGGCGTCTCGTCCACCTCCACGATCGCCACTCCGTCGCCAGATTAT
GCTTTTCGAGAGTCTGAGAGGGCGTCATCGACCGTCGGCATGGTGTCGCC
AGCCGTCAGTACGGCGTTGCCGGTAGCAGGTGATCCTGTTGCTGCTAAAT
CGAAGTTTTTCTTGCCCAGCATCACGTCTGGCAGGCCCGGCGAAGCGCGG
GCGGCGTACATCGTACAGTGGACGGGCTACCACCCGCTGGAGGAGCACCC
AGAGCTGCTAGCTGGGGCGTTGCGGGGCTACGACCGCTGCTCCGTCATCG
TTGGCGGCGTGGATACTGGGGTTCAGGAGGGAAGGGTGGACGGGGATAGC
GTTGGCGCCTGCAGCAGCGGCGGCGGCAGTGGTGACAGCGGTAGCAGCAG
CAGCAGCAGCAGCAGCAGCAG CAGCAGCGGTGGAAATTACGACGCTGGCA
ACGACGACGACGACGACAACCGTTGCCACGGCTGCTGCTGGGAGATGGTG
GAGAGAAAAAGCGCTGCCACCGCGGGGAAAAAACACCCCAGCGACTTCTC
GCTGGTCCGCTGGCTTCCGCTGCGTCAATCGAGAGCAATGTCAAACGACG
TCCACGCCCTGA AAGAACAGGGCGAAGACACCCCCCTGGAGCAACATCCT
CAAGGGGAAAAGGGAGAGAGAGAGGAGTTGCGTCGGGGTGAAGAAGACTA
CCGGGAGGAGCCGACGTGTAGGCTTCAAGCTAGAGATCCGCGTGGGGAGA
CGGAGCGTCATCGAGGCCCCATGAGCCGGG back to top Coding sequence (CDS) from alignment at C-linearis_contig93:285982..287761+
>mRNA_C-linearis_contig93.16908.1 ID=mRNA_C-linearis_contig93.16908.1|Name=mRNA_C-linearis_contig93.16908.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at C-linearis_contig93:285982..287761+ (Chordaria linearis ClinC8C monoicous) back to top