prot_C-linearis_contig92.16863.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig92.16863.1
Unique Nameprot_C-linearis_contig92.16863.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length159
Homology
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 3.200e-66
Identity = 118/159 (74.21%), Postives = 126/159 (79.25%), Query Frame = 0 
Query:    1 MPSTLSKASGSVERAVATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADGVYGTPLHVAVTKGFYQGIVMLIDAGANVDSRLDDEAAPLSFAARDGWLEAVTVLLPANAN 159
            MPSTLSKASGS++  +ATT I+RGCGDTNQTPLMVASVIGSSRVVRDLLRQGA VSVADSDG TALHHSVYH HLAVSKDLIE GADLEA+ GG        TPLHVA TKGF QG+ +L+D      SRLDD A PL  AA DG LEAV VLL ANAN
Sbjct:    1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGG------KDTPLHVAATKGFCQGMKLLMD------SRLDDGATPLFLAASDGRLEAVRVLLRANAN 147
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.100e-44
Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 0 
Query:    1 MPSTLSKASGSVERAVATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPG 93
            MPSTLSKASGSVERAVATTDI+R CGDTN TPLMVASVIGSSRVV+DLLRQGA VSVADSDGYTALHHSVYH+HLAVS  LIE GADLEA+PG
Sbjct:    1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPG 93
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 1.680e-44
Identity = 86/107 (80.37%), Postives = 92/107 (85.98%), Query Frame = 0 
Query:    9 SGSVERAVATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADGVYGTPLHVAVTKGFYQ 115
            SGSVER +ATTDI+R CGDTNQTPLMVASVIGSSRVVRDLLRQGA VS+ADSDGY ALHH+VYHKHLAVSKDLIE GADL+A+PGG        TPLHVA TKGF Q
Sbjct:  399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGID------TPLHVAATKGFCQ 499
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 5.340e-42
Identity = 97/169 (57.40%), Postives = 115/169 (68.05%), Query Frame = 0 
Query:    1 MPSTLSK-----ASGSVERAVA-----TTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADGVYGTPLHVAVTKGFYQGIVMLIDAGANVDSRLDDEAAPLSFAARDGWLEAVTVLLPANAN 159
            MPSTLSK     ASGSVER VA     + DI+ G GD  +TPLM A  +G  RVVR LLR GARVSVAD+DG TALH S+ +KHLAVSK L++ GA +EA+       GV GTPLHVA  KGF++G+VMLI AGANVDS  +  A PL  +AR G LE V +L+ A  N
Sbjct:    1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEAR-------GVDGTPLHVAAAKGFHKGMVMLIHAGANVDSEQEGRATPLYISARQGRLEDVRILVGAKVN 162
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.620e-35
Identity = 80/134 (59.70%), Postives = 95/134 (70.90%), Query Frame = 0 
Query:    1 MPSTLSK-----ASGSVERAVA-----TTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADGVYGTPLHVAVTKGFYQGIVMLIDAG 124
            MPSTLSK     ASGSVER VA     + +I+ G GD  +TPLM AS +G  RVVR LLR GARVSVAD+DG TALH S+ +KHLAVSK L++ GA +EA+       GV GTPLHVA  KGF++G+VMLI AG
Sbjct:    1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEAR-------GVDGTPLHVAAAKGFHKGMVMLIHAG 127
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.520e-35
Identity = 69/79 (87.34%), Postives = 73/79 (92.41%), Query Frame = 0 
Query:    1 MPSTLSKASGSVERAVATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSK 79
            MPSTLSKASGS +  +ATTDI+R CGDTNQTPLMVASVIG SRVVRDLLRQGA VSVADSDGYTALHH+VYHKHLAVSK
Sbjct:    7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK 85
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.680e-34
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 0 
Query:    1 MPSTLSK-----ASGSVERAVA-----TTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADGVYGTPLHVAVTKGFYQGIVMLIDAGA 125
            MPSTLSK     ASGSVER VA     + DI+ G GD  +TPLM AS +G  RVVR LLR GARVSVAD+DG TALH S+  KHLAVS+ L++ GA +EA+       GV GTPLHVA  KGF++G+VMLI   A
Sbjct:    1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEAR-------GVDGTPLHVAAAKGFHKGMVMLIHVDA 128
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 4.440e-27
Identity = 75/160 (46.88%), Postives = 103/160 (64.38%), Query Frame = 0 
Query:    8 ASGSVERAV-----ATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPG--GFMADGVYG-TPLHVAVTKGFYQGIVMLIDAGANVDSRLDDEAAPLSFAARDGWLEAVTVLLPANAN 159
            +SGSVER +       T+I+R C +   T LM A+  G  R+VR LLR GA VSV+  DG+TALH ++  ++LAV+K LI+ GA++EAK       ++ V G TPLH+A  +GF +G+V LI+AGANVDSR+ D +  +  AA  G LEAV +L    AN
Sbjct:   26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKAN 185
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 3.530e-26
Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 0 
Query:   35 VASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADGVYGTPLHVAVTKGFYQGIVMLIDAGAN---------VDSRLDDEAAPLSFAARDGWLEAVTVL 153
            VAS +G  RVVR LLR GARVS AD+DG TALH S+ +KHLAVSK L++ GADLEA+     A GV  TPLHVA  KGF++G+VMLI AG           + +  D E+ PL  AA +G L  V  L
Sbjct:   37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVREL 164
[Close]
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 2.300e-14
Identity = 66/172 (38.37%), Postives = 84/172 (48.84%), Query Frame = 0 
Query:    1 MPSTLSKA-----SGSVERAV-----ATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADG--VYG-TPLHVAVTKGFYQGIVMLIDAGANVDSRLDDEAAPLSFAARDGWLEAVTVLLPANAN 159
            MPST S       +GSVER +       T+I+R C +   T LM A+  G  R+VR LLR GA VSV+  DG+                           K      D   V G TPLH+A  +GF  G+V LIDAGANVDSR+ + +  +  AA  G L+AV +LL   AN
Sbjct:    1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERAN 172
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH66_ECTSI3.200e-6674.21EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JHQ8_9PHAE1.100e-4489.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE1.680e-4480.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE5.340e-4257.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G449_ECTSI1.620e-3559.70EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L5L0_9PHAE4.520e-3587.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7G2C8_ECTSI2.680e-3458.52EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KSL5_9PHAE4.440e-2746.88Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A6H5JNS0_9PHAE3.530e-2653.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP44_ECTSI2.300e-1438.37EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 61..90
e-value: 0.0044
score: 26.2
coord: 100..129
e-value: 0.88
score: 18.6
coord: 28..57
e-value: 11.0
score: 14.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 61..93
score: 10.633
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..132
score: 9.885
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 28..60
score: 11.087
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 95..159
e-value: 6.6E-11
score: 43.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..94
e-value: 4.1E-17
score: 64.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 27..159
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 13..91
e-value: 2.5E-8
score: 34.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 28..159
score: 32.89
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 20..91
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 102..158
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 20..91
coord: 102..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig92contigC-linearis_contig92:176539..177015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig92.16863.1mRNA_C-linearis_contig92.16863.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig92 176539..177015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig92.16863.1 ID=prot_C-linearis_contig92.16863.1|Name=mRNA_C-linearis_contig92.16863.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=159bp
MPSTLSKASGSVERAVATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLR
QGARVSVADSDGYTALHHSVYHKHLAVSKDLIEGGADLEAKPGGFMADGV
YGTPLHVAVTKGFYQGIVMLIDAGANVDSRLDDEAAPLSFAARDGWLEAV
TVLLPANAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom