prot_C-linearis_contig91.16845.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16845.1
Unique Nameprot_C-linearis_contig91.16845.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length636
Homology
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Match: D7FP07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP07_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 1.210e-157
Identity = 270/366 (73.77%), Postives = 286/366 (78.14%), Query Frame = 0
Query:   13 RLWLRNEVFDGVLPLRATGVPLSPARGAVAGAGGGAAAAVPSPLFVLLKAVREVNPETVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGTTDKVSGGLGKEGKVQAIELSVSQLGLFLFLHLHPDSTNHRLASQRAHQADSVWPSEEAAAALGGSPRRTG-------RVGHGR-AISPNSLAGAPSSPRGFGTGXXXXXXXXAGIHMFPSSSPLSPTRARSMRLHTRTSDDAHRLGFVKRHLHEMLRLASSHPAALLTTPSALASLASGSRTLQQQGNAVAEAGTAALMGETKPASGGAAEETGEE--------DEPDLSRDDFESLGFLLTGGLSLEGEIAPGVSLADLCPLWNEGG 362
            RLWLRNEVFDGVLPLRATGVPLSPAR       G   AA PSPLFVLLKAVREVNP+TVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLG+T+K+S G+GKE KVQ+++LSVSQLGLFLFLHLH DSTNHRLASQRAHQADSVWPSEEAAAALGGSPRR G       RV HGR A SPNSLA APSSPRGFGT XXXXXXXXAGIHMFPS+SP+SPTRARSMRLHTRTSD+AHRLGFVKRHLHE+LRLASSHPAALL TP++LASLA                                               DEPDLSRD+FESLGFLLTGG SLE E APGVSLADLCPLW + G
Sbjct:    6 RLWLRNEVFDGVLPLRATGVPLSPARNL-----GPGTAAGPSPLFVLLKAVREVNPDTVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGSTEKMSSGVGKEDKVQSVQLSVSQLGLFLFLHLHTDSTNHRLASQRAHQADSVWPSEEAAAALGGSPRRAGGPAISPGRVAHGRGATSPNSLA-APSSPRGFGTXXXXXXXXXAGIHMFPSTSPVSPTRARSMRLHTRTSDEAHRLGFVKRHLHELLRLASSHPAALLATPASLASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPDLSRDEFESLGFLLTGGASLEAERAPGVSLADLCPLWGDQG 365          
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Match: A0A6H5K6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y6_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 8.210e-112
Identity = 190/226 (84.07%), Postives = 200/226 (88.50%), Query Frame = 0
Query:   13 RLWLRNEVFDGVLPLRATGVPLSPARGAVAGAGGGAAAAVPSPLFVLLKAVREVNPETVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGTTDKVSGGLGKEGKVQAIELSVSQLGLFLFLHLHPDSTNHRLASQRAHQADSVWPSEEAAAALGGSPRRTG-------RVGHGR-AISPNSLAGAPSSPRGFGTGXXXXXXXXAGIHMFPSSSPLSPTR 230
            RLWLRNEVFDGVLPLRATGVPLSPAR       G   AA PSPLFVLLKAVREVNP+TVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLG+T+KV+ G+GKE KVQ+++LSVSQLGLFLFLHLH DSTNHRLASQRAHQADSVWPSEEAAAALGGSPRR G       RV HGR A SPNSLA APSSPRGFGTGXXXXXXXXAGIHMFPS+SP+SPTR
Sbjct:    6 RLWLRNEVFDGVLPLRATGVPLSPARNL-----GPGTAAGPSPLFVLLKAVREVNPDTVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGSTEKVAVGVGKEDKVQSVQLSVSQLGLFLFLHLHTDSTNHRLASQRAHQADSVWPSEEAAAALGGSPRRAGGPAISPGRVAHGRGATSPNSLA-APSSPRGFGTGXXXXXXXXAGIHMFPSTSPVSPTR 225          
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Match: A0A835YHX7_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.000e-25
Identity = 126/387 (32.56%), Postives = 159/387 (41.09%), Query Frame = 0
Query:   50 AAVPSPLFVLLKAVREVNPETVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGTTDKVSGGLGKEGKVQAIELSVSQLGLFLFLHLHPDSTNHRLASQRAH-QADSVWPSEEAAAALGG----------SPRRTGRVGHGRAISPNSLAGAPSSPRGFGTGXXXXXXXXAGIHMFPSSSPLSPTRARSMRLHTRTSDDAHRLGFVKRHLHEMLRLASSHPAALLTTPSALASLASGSRTLQQQGNAVAEAGTAALMGETKPASGGAAEETGEEDEPDLSRDDFESLGFLLTGGLSLEGEIAPGV-SLADLCPLWN----EGGKPRERVRI----------------SEVADYLMSALTVNEVLYPVPPSPSAIFLADSVA 404
            AA+ + L  L +A+R  +P  V YTTW+ EGWRVL W      LFWEML +Y   S  +       G   + G  Q +E+ +S L LFLFLHLHPD+   +  +  A   ADSVWPSE+A +              SP R G   HG   SP    G       FG G  XXXXXX              T  R           AHRL FV+RH+  +LRL +   A              G                                          +R D  SLGFL+ GG +L+    PG   LADLC L +        P                       EV +++ +ALTVN+VLYPVPPSP+A  LAD+ A
Sbjct:   17 AAIMTTLASLAEALRCQHPTMVAYTTWVAEGWRVLHWQLKQTTLFWEMLLLYTKDSSSVEQDSSGGGEKLRRGPTQPVEVPISALLLFLFLHLHPDALVQKAPASAARLHADSVWPSEDAPSPRSAAAHSPRNGLHSPTRHGAARHGMPHSPGGRTGVF-----FGAGAAXXXXXXXXXXXXXXXXGRCATGLR-----------AHRLAFVRRHVAALLRLLADRDAP------------GGXXXXXXXXXXXXXXXXXXXXXHA-------------------TRGDLSSLGFLIAGGHALDD---PGPWDLADLCALRHVQAGTAAAPXXXXXXXXXXXXXXXXXAAGSWGEVCEWVAAALTVNDVLYPVPPSPAAQALADAHA 353          
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Match: A0A835Z1R1_9STRA (Tubulin binding cofactor C-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 8.740e-17
Identity = 117/396 (29.55%), Postives = 158/396 (39.90%), Query Frame = 0
Query:   14 LWLRNEVFDGVLPLRATG----VPLSPARGAVAGAGGGAAAAVPSPLFVLLKAVREVNPETVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGTTDKVSGGLGKEGKVQAIELSVSQLGLFLFLHLHPDSTNHRLASQRAHQADSVWPSEEAAAALGGSPRRTGRVGHG-------------RAISPNSLAGAPSSPRGFGTGXXXXXXXXAGIHMFPSSSPLSPTRARSMRLHTRTSDDAHRLGFVKRHLHEMLRLASSHPAALLTTPSALASLASGSRTLQQQGNAVAEAGTAALMGETKPASGGAAEETGEEDEPDLSRDDFESLGFLLTGGLSLEGEIAPGVSLADLCPLWNEGGKPRERVRISEVADYLMSALTVNEVLYPVPP 392
            LWLRNE+F+GVLPL+  G    V   P+  A++       A++   L  L++A R V+P+ V        G+ +L W+                                     +  EL +S                            SVWP++E AA    SPR   R G G             RA       GA  SPR FG                 + SP+SP   R++RLH++ +D+AHRL F+KRHLH++LRL S  PAA      AL++ A+          AVA A                               D  +LGFL+ GG +L+   A    L DLCPL   G         +EVAD+L +ALTVN+VLYP PP
Sbjct:    4 LWLRNEIFEGVLPLKTMGALQGVSSLPSTNAIS------EASIMGSLAALVRAFRSVHPDLV--------GYPMLAWAAE-----------------------------------KKAELPIS----------------------------SVWPADEQAA----SPRT--RAGSGASXXXXXXXXXXLRAGFGXXXXGA-LSPRAFGFAGGYGA----------AGSPVSPRPGRALRLHSKGADEAHRLAFIKRHLHDLLRLVS--PAAA----DALSAAAAXXXXXXXXAFAVARA-------------------------------DLSALGFLIAGGRALDD--ASQRDLCDLCPLAGGGATRGPVGSAAEVADWLAAALTVNDVLYPAPP 266          
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Match: D7FP08_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP08_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.370e-8
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  365 RERVRISEVADYLMSALTVNEVLYPVPPSPSAIFLADSVAPP------GGHLSEEAV 415
            R+RV + EVA YLM ALTVN+V+YP+PPSPSAIFLADS A        GGH  +EAV
Sbjct:   11 RDRVPVCEVAQYLMGALTVNDVVYPIPPSPSAIFLADSAAATTATATAGGHGPDEAV 67          
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Match: A0A7S2M630_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M630_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.290e-7
Identity = 30/75 (40.00%), Postives = 40/75 (53.33%), Query Frame = 0
Query:   53 PSPLFVLLKAVREVNPETVRYTTWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGTTDKVSGGLGKEGKVQAI 127
            P  L   ++A+         YT WITE W +LQWSEPSA LFWEM  MY  H+  + +     GG G E + + +
Sbjct:   57 PLSLLSTVEALESAGSWRTHYTVWITEAWNILQWSEPSAALFWEMANMY--HTLYVASLSFGGGGSGGEARARVL 129          
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Match: K8ZAD7_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZAD7_NANGC)

HSP 1 Score: 58.2 bits (139), Expect = 3.190e-6
Identity = 38/95 (40.00%), Postives = 50/95 (52.63%), Query Frame = 0
Query:   75 TWITEGWRVLQWSEPSAKLFWEMLCMYQCHSPRLGTTDKVSGGLGKEGKVQA-----IELSVSQLGLFLFLHLHPDSTNHRLASQRAHQADSVWP 164
            TWI+E  RVLQW EP+A LFWEML ++   + R     K  G  G EG  +A       +++ +L LFL+LHL   ST     S      + VWP
Sbjct:   78 TWISESQRVLQWGEPTACLFWEMLNLFLPPTHRRPAPRKGGGEDGTEGGSEAGVPPSDRVTLVELSLFLWLHLPDASTK---VSTHPATYNVVWP 169          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FP07_ECTSI1.210e-15773.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6Y6_9PHAE8.210e-11284.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHX7_9STRA1.000e-2532.56Tubulin binding cofactor C-domain-containing prote... [more]
A0A835Z1R1_9STRA8.740e-1729.55Tubulin binding cofactor C-domain-containing prote... [more]
D7FP08_ECTSI3.370e-863.16C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A7S2M630_9STRA3.290e-740.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K8ZAD7_NANGC3.190e-640.00Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 12..597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:657672..669762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16845.1mRNA_C-linearis_contig91.16845.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 652831..672289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16845.1 ID=prot_C-linearis_contig91.16845.1|Name=mRNA_C-linearis_contig91.16845.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=636bp
MSASSSSSSPPPRLWLRNEVFDGVLPLRATGVPLSPARGAVAGAGGGAAA
AVPSPLFVLLKAVREVNPETVRYTTWITEGWRVLQWSEPSAKLFWEMLCM
YQCHSPRLGTTDKVSGGLGKEGKVQAIELSVSQLGLFLFLHLHPDSTNHR
LASQRAHQADSVWPSEEAAAALGGSPRRTGRVGHGRAISPNSLAGAPSSP
RGFGTGTSAAAAAAAGIHMFPSSSPLSPTRARSMRLHTRTSDDAHRLGFV
KRHLHEMLRLASSHPAALLTTPSALASLASGSRTLQQQGNAVAEAGTAAL
MGETKPASGGAAEETGEEDEPDLSRDDFESLGFLLTGGLSLEGEIAPGVS
LADLCPLWNEGGKPRERVRISEVADYLMSALTVNEVLYPVPPSPSAIFLA
DSVAPPGGHLSEEAVTPGGGGAAAAAAAAAAAAAGGRARGRRGDSPCAAL
GSPPRQLRLPHHGRAQRRRRRPSPGPAGELLSGVVRVRAVRGSICHCHGL
QGLHRGDRCRGRNGSRGGVRAHAAGDVLPPPDGDQLPGVHLPDLRGHAAG
AQRRQPGVPVRPVQLLLPETQGALTPGGPPGRGGRQGPGQPVGKPGGGFD
DGNAFHVCGRDAHLRLESQEPIARGQRGHRGRDGA*
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