prot_C-linearis_contig91.16814.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16814.1
Unique Nameprot_C-linearis_contig91.16814.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length192
Homology
BLAST of mRNA_C-linearis_contig91.16814.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 7.310e-20
Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 0
Query:   17 QSLVRVLLDAAAGRRVGKFWGTEAHSYATVVAAG--DGRAKIVKMLVTAEGAGRQQHWARVRLSDIPALFSAANRGSVSTVAILLAAGADELARDNDGYRARDFAGMGLPA---NDSKTPAVKRTLQRAPAHRALSWTW 150
            Q +VRVLL     + +G   G +    A   AA    GRA IV+ML++AEG  R+ HWAR R  + P L SA + G++S   +LLAAGADE A + DG  AR+  G   P+   + +K  A+ R L+R PA+RA SW W
Sbjct:  343 QEVVRVLLTDRGMKAIG---GADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAW 478          
BLAST of mRNA_C-linearis_contig91.16814.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.040e-18
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 0
Query:   52 GRAKIVKMLVTAEGAGRQQHWARVRLSDIPALFSAANRGSVSTVAILLAAGADELARDNDGYRARDFAGMGLPA---NDSKTPAVKRTLQRAPAHRALSWTW-STALCSKGGGAAAGGLCESSPAPVGVRILPAE 182
            GRA IV+ML++AEG  R+ HWAR R  + P L  A + G++S   +LLAAGADE A + DG  AR+  G   P+   + +K  A+ R L R PA+RA SW W +TA     G   A     ++P   G     ++
Sbjct:  385 GRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPATARAYTAGHTCAAAATTAAPGACGAAAASSD 519          
BLAST of mRNA_C-linearis_contig91.16814.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.340e-15
Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 0
Query:   17 QSLVRVLLDAAAGRRVGKFWGTEAHSYATVVAAGDGRAKIVKMLVTAEGAGRQQHWARVRLS-DIPALFSAANRGSVSTVAILLAAGADELARDNDGYRARDFAGMGLPA---NDSKTPAVKRTLQRAPAHRALSWTW 150
            +S++R+L        VG   G      +   A   G+A+I+++L+ AEG  RQ+HWAR RL    P ++ AA  G ++ V +LLAAGADE   D DGY A +  G  LP+   +  +  A+ R LQR PA+RA SW W
Sbjct:  235 ESILRILCSERGMDAVGG--GAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAW 370          
BLAST of mRNA_C-linearis_contig91.16814.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.200e-9
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 0
Query:   19 LVRVLLDAAAGRRVGKFWGTEAHSYATVVAAGDGRAKIVKMLVTAEGAGRQQHWARVRLSDIPALFSAANRGSVSTVAILLAAGADELARDNDGYRARDFAGMGL--PANDS--KTPAVKRTLQRAPAHRALSWTWST 152
            +VR++L+    R VG   G  A   +  VA    +AKI++MLV+AEG   ++ WA  RL D   L  AA   SV  + +LL+AGA E   +  G  A +  G+ L  PA  S  K  AV R LQR PA+RA S+ W T
Sbjct:  223 MVRMMLEHGINR-VG---GLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPT 356          
BLAST of mRNA_C-linearis_contig91.16814.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.020e-8
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 0
Query:   19 LVRVLLDAAAGRRVGKFWGTEAHSYATVVAAGDGRAKIVKMLVTAEGAGRQQHWARVRLSDIPALFSAANRGSVSTVAILLAAGADELARDNDGYRARDFAGMGL--PANDS--KTPAVKRTLQRAPAHRALSWTWST 152
            +VR++L+    R VG   G  A   +  VA    +AKI++MLV+AEG   ++ WA  RL D   L  AA   SV  + +LL+AGA E   +  G  A +  G+ L  PA  S  K  AV R LQR PA+RA S+ W T
Sbjct:  278 MVRMMLEHGINR-VG---GLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPT 411          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LSK8_ECTSI7.310e-2043.17Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JSC7_9PHAE4.040e-1840.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK4_ECTSI1.340e-1539.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JK53_9PHAE5.200e-940.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4M4_ECTSI1.020e-840.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 11..122
e-value: 1.6E-8
score: 36.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 45..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:250526..251101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16814.1mRNA_C-linearis_contig91.16814.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 250378..252543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16814.1 ID=prot_C-linearis_contig91.16814.1|Name=mRNA_C-linearis_contig91.16814.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=192bp
MPWATRRRYRWFSHVSQSLVRVLLDAAAGRRVGKFWGTEAHSYATVVAAG
DGRAKIVKMLVTAEGAGRQQHWARVRLSDIPALFSAANRGSVSTVAILLA
AGADELARDNDGYRARDFAGMGLPANDSKTPAVKRTLQRAPAHRALSWTW
STALCSKGGGAAAGGLCESSPAPVGVRILPAEGPAFHHGPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf