prot_C-linearis_contig90.16786.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16786.1
Unique Nameprot_C-linearis_contig90.16786.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length400
Homology
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 8.090e-77
Identity = 139/356 (39.04%), Postives = 202/356 (56.74%), Query Frame = 0
Query:   56 AGYCPPCDALFSKLQRSPDSGNLVQRVEMQMRGEPKSGTTFMFHWAHGAMVHACDSLNLSFGSKACRMSDEGQDLTGTPKP----------ETVFLTFEP-------ALGGDDAR-CSCPGVERVEIIMTDNHKHMLPVWGSCLWQHSNGLAADEEECMSVANRPVQDHADLWNCVEQAGCEIWDDRPQFVMMRDPRPMAVSSYFYLQTHPETRGGKHP----ALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGL 389
            A  CPPC+ +F KL  +       Q VE+Q+RGEPKSGT+FMF WA  A++  C+ L   +G   C     G       KP          + VF  F+P       + GG  A  C C  V++V I+++   KH LPV  SC WQH + +  + + C +V  R V ++ D   C++Q  C I DDR Q +++RDPR +AVSS+F+L+TH       HP      + +V+  VL MLP I  +I LR+ +    L  ++  F YD++LADPLQWH RWL+  GL  P  VV  A++ S+R E+ F  +G ++ HPGG+E + KR+W+DE+S  +  +++ I R WLPPV+L K G+
Sbjct:   80 ADECPPCETMFGKLNGA------QQHVELQLRGEPKSGTSFMFEWAVNALMVTCEELGRLYGEGTCTFRWRGFFSRRKQKPVSPETALVDMKEVFFVFKPNRQHGRSSAGGPSASPCPCSTVDKVSIMVSSLFKHDLPVPPSCPWQHVDNVTPENKGCTTVNGRRVGNYTDTVECLQQHPCRIVDDRIQMLILRDPRAVAVSSFFHLKTH------HHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLRREYGFAGKG-VDKHPGGKEATEKRTWEDEISHDVAEQLEGICREWLPPVLLEKFGI 422          
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 8.920e-58
Identity = 103/233 (44.21%), Postives = 142/233 (60.94%), Query Frame = 0
Query:  159 VERVEIIMTDNHKHMLPVWGSCLWQHSNGLAADEEECMSVANRPVQDHADLWNCVEQAGCEIWDDRPQFVMMRDPRPMAVSSYFYLQTHPETRGGK-HPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLP 390
            + RVEI ++   KH LPV  SC W H +G   + + C S    PV+  ADLW C+++  CEI D+R QFV +RDPR +AVS+YF+ + H +    K HP+L+ TV    L +LP +  +  LR  LF GLL  ++E+FWY+  + DP  WHYRW + AGL LPG  +    D  V    +      LN HPGG E S+ R+W+DEVSP +  E+D I R+WLP V+LA+ G+P
Sbjct:    2 LRRVEISISTVDKHRLPVNESCPWSHGSGTVHEGDGCWSFDGHPVETGADLWACMQKTPCEITDNRLQFVPIRDPRAVAVSTYFH-RVHKDNNYQKLHPSLDQTV----LEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILPGGWI----DGMVA---ENQAHKHLNPHPGGAETSDNRTWQDEVSPGIRPEMDSILRKWLPGVLLARYGIP 222          
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.830e-41
Identity = 71/172 (41.28%), Postives = 111/172 (64.53%), Query Frame = 0
Query:  220 IWDDRPQFVMMRDPRPMAVSSYFYLQTHPETRGGKHPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLPL 391
            + DD  QF ++RDPR +AVS+YFY+++HP      H +   ++++AVL++LP + ++  +R  LF G L  +SE+FWY+DA+ DPL WHYRW + AG  LP S ++         +     +     HPGG++ S+KR+W+DE+SP +  E+D I R WLP V+L ++G+PL
Sbjct:   25 LLDDSLQFAVLRDPRAVAVSTYFYVKSHPAFYSD-HVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWIKDIDATLPEAQQKVKRDP----HPGGQQVSSKRTWEDEISPAIREEMDSILRTWLPGVLLERLGIPL 191          
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: D7G2T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T4_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 5.250e-33
Identity = 67/162 (41.36%), Postives = 101/162 (62.35%), Query Frame = 0
Query:  230 MRDPRPMAVSSYFYLQTHPETRGGKHPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVR-AASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLP 390
            MRDPR +AVS+YFY++  P      HP+   ++++AV+++LP I ++  +R  LF G L  +SE+FWY+DA+ DPL W+ RW +LAG  LP   ++   +  +   E D   E     HPGG+  S+ R+W+DEVSP    E++ I R WLP V+LA+  +P
Sbjct:    1 MRDPRAVAVSTYFYIKRSPIHL--HHPSRGKSLDEAVVVILPQICQFTTIRHILFDGQLSDRSEIFWYEDAMRDPLGWYNRWASLAGFTLPARWIKDIQASLTEAAENDRKREP----HPGGQVVSSDRTWEDEVSPETRLEMNSILRTWLPGVLLARFDVP 156          
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: A0A6H5JP89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP89_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.880e-30
Identity = 65/156 (41.67%), Postives = 99/156 (63.46%), Query Frame = 0
Query:  239 SSYFYLQTHPETRGGKHPAL-----NMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGL 389
            SS+F+L+TH       H  L     + +V+  VL MLP I  +I LR+ +    L  ++  F YD++LADPLQWH RWL+  GL  P +VV  A++ S+R E+ F  +G ++ HPGG+E + KR+W+DE+S  +  ++++I R WLPPV+L K G+
Sbjct:    8 SSFFHLKTH-------HTPLWKYWHDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPAVVLQATNTSLRREYGFVGKG-VDKHPGGKEATEKRTWEDEISREVAEQLEDICREWLPPVLLEKFGI 155          
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: D7FUF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF6_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.380e-24
Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = 0
Query:  283 LFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLP 390
            +F+GLL  +SE+FWY++ L DP  WHYRW + AGL LP + +      +V  E  F+     N HPGG + + KR+W+DEVSP +H +++ I R+WLPPV+LA+  +P
Sbjct:    1 MFEGLLSDRSEMFWYEETLEDPFAWHYRWASFAGLILPRAWIDGM--VAVNQERLFF-----NRHPGGGKRTAKRTWRDEVSPGIHHDMESILRKWLPPVLLARFEVP 101          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LJE4_ECTSI8.090e-7739.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDV7_9PHAE8.920e-5844.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG38_9PHAE2.830e-4141.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T4_ECTSI5.250e-3341.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP89_9PHAE2.880e-3041.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF6_ECTSI2.380e-2445.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..399
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 88..379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:594894..596536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16786.1mRNA_C-linearis_contig90.16786.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 585553..597116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16786.1 ID=prot_C-linearis_contig90.16786.1|Name=mRNA_C-linearis_contig90.16786.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=400bp
MVTTTAKIVFLLGWLSGLIVMFTMLQLGWLRGTYQYSPGPGQRRSQPLAI
ATSADAGYCPPCDALFSKLQRSPDSGNLVQRVEMQMRGEPKSGTTFMFHW
AHGAMVHACDSLNLSFGSKACRMSDEGQDLTGTPKPETVFLTFEPALGGD
DARCSCPGVERVEIIMTDNHKHMLPVWGSCLWQHSNGLAADEEECMSVAN
RPVQDHADLWNCVEQAGCEIWDDRPQFVMMRDPRPMAVSSYFYLQTHPET
RGGKHPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDA
LADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGG
EEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLPLEARDPVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase