mRNA_C-linearis_contig90.16786.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig90.16786.1
Unique NamemRNA_C-linearis_contig90.16786.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.840e-74
Identity = 139/356 (39.04%), Postives = 202/356 (56.74%), Query Frame = 2 
Query:  272 AGYCPPCDALFSKLQRSPDSGNLVQRVEMQMRGEPKSGTTFMFHWAHGAMVHACDSLNLSFGSKACRMSDEGQDLTGTPKP----------ETVFLTFEP-------ALGGDDAR-CSCPGVERVEIIMTDNHKHMLPVWGSCLWQHSNGLAADEEECMSVANRPVQDHADLWNCVEQAGCEIWDDRPQFVMMRDPRPMAVSSYFYLQTHPETRGGKHP----ALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGL 1273
            A  CPPC+ +F KL  +       Q VE+Q+RGEPKSGT+FMF WA  A++  C+ L   +G   C     G       KP          + VF  F+P       + GG  A  C C  V++V I+++   KH LPV  SC WQH + +  + + C +V  R V ++ D   C++Q  C I DDR Q +++RDPR +AVSS+F+L+TH       HP      + +V+  VL MLP I  +I LR+ +    L  ++  F YD++LADPLQWH RWL+  GL  P  VV  A++ S+R E+ F  +G ++ HPGG+E + KR+W+DE+S  +  +++ I R WLPPV+L K G+
Sbjct:   80 ADECPPCETMFGKLNGA------QQHVELQLRGEPKSGTSFMFEWAVNALMVTCEELGRLYGEGTCTFRWRGFFSRRKQKPVSPETALVDMKEVFFVFKPNRQHGRSSAGGPSASPCPCSTVDKVSIMVSSLFKHDLPVPPSCPWQHVDNVTPENKGCTTVNGRRVGNYTDTVECLQQHPCRIVDDRIQMLILRDPRAVAVSSFFHLKTH------HHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLRREYGFAGKG-VDKHPGGKEATEKRTWEDEISHDVAEQLEGICREWLPPVLLEKFGI 422
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BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.030e-55
Identity = 103/233 (44.21%), Postives = 142/233 (60.94%), Query Frame = 2 
Query:  581 VERVEIIMTDNHKHMLPVWGSCLWQHSNGLAADEEECMSVANRPVQDHADLWNCVEQAGCEIWDDRPQFVMMRDPRPMAVSSYFYLQTHPETRGGK-HPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLP 1276
            + RVEI ++   KH LPV  SC W H +G   + + C S    PV+  ADLW C+++  CEI D+R QFV +RDPR +AVS+YF+ + H +    K HP+L+ TV    L +LP +  +  LR  LF GLL  ++E+FWY+  + DP  WHYRW + AGL LPG  +    D  V    +      LN HPGG E S+ R+W+DEVSP +  E+D I R+WLP V+LA+ G+P
Sbjct:    2 LRRVEISISTVDKHRLPVNESCPWSHGSGTVHEGDGCWSFDGHPVETGADLWACMQKTPCEITDNRLQFVPIRDPRAVAVSTYFH-RVHKDNNYQKLHPSLDQTV----LEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILPGGWI----DGMVA---ENQAHKHLNPHPGGAETSDNRTWQDEVSPGIRPEMDSILRKWLPGVLLARYGIP 222
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BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 8.340e-40
Identity = 71/172 (41.28%), Postives = 111/172 (64.53%), Query Frame = 2 
Query:  764 IWDDRPQFVMMRDPRPMAVSSYFYLQTHPETRGGKHPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLPL 1279
            + DD  QF ++RDPR +AVS+YFY+++HP      H +   ++++AVL++LP + ++  +R  LF G L  +SE+FWY+DA+ DPL WHYRW + AG  LP S ++         +     +     HPGG++ S+KR+W+DE+SP +  E+D I R WLP V+L ++G+PL
Sbjct:   25 LLDDSLQFAVLRDPRAVAVSTYFYVKSHPAFYSD-HVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWIKDIDATLPEAQQKVKRDP----HPGGQQVSSKRTWEDEISPAIREEMDSILRTWLPGVLLERLGIPL 191
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BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: D7G2T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T4_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 6.000e-32
Identity = 67/162 (41.36%), Postives = 101/162 (62.35%), Query Frame = 2 
Query:  794 MRDPRPMAVSSYFYLQTHPETRGGKHPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVR-AASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLP 1276
            MRDPR +AVS+YFY++  P      HP+   ++++AV+++LP I ++  +R  LF G L  +SE+FWY+DA+ DPL W+ RW +LAG  LP   ++   +  +   E D   E     HPGG+  S+ R+W+DEVSP    E++ I R WLP V+LA+  +P
Sbjct:    1 MRDPRAVAVSTYFYIKRSPIHL--HHPSRGKSLDEAVVVILPQICQFTTIRHILFDGQLSDRSEIFWYEDAMRDPLGWYNRWASLAGFTLPARWIKDIQASLTEAAENDRKREP----HPGGQVVSSDRTWEDEVSPETRLEMNSILRTWLPGVLLARFDVP 156
[Close]
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: A0A6H5JP89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP89_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 2.350e-29
Identity = 65/156 (41.67%), Postives = 99/156 (63.46%), Query Frame = 2 
Query:  821 SSYFYLQTHPETRGGKHPAL-----NMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGL 1273
            SS+F+L+TH       H  L     + +V+  VL MLP I  +I LR+ +    L  ++  F YD++LADPLQWH RWL+  GL  P +VV  A++ S+R E+ F  +G ++ HPGG+E + KR+W+DE+S  +  ++++I R WLPPV+L K G+
Sbjct:    8 SSFFHLKTH-------HTPLWKYWHDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPAVVLQATNTSLRREYGFVGKG-VDKHPGGKEATEKRTWEDEISREVAEQLEDICREWLPPVLLEKFGI 155
[Close]
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Match: D7FUF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF6_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 8.470e-24
Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = 2 
Query:  953 LFQGLLERQSEVFWYDDALADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGGEEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLP 1276
            +F+GLL  +SE+FWY++ L DP  WHYRW + AGL LP + +      +V  E  F+     N HPGG + + KR+W+DEVSP +H +++ I R+WLPPV+LA+  +P
Sbjct:    1 MFEGLLSDRSEMFWYEETLEDPFAWHYRWASFAGLILPRAWIDGM--VAVNQERLFF-----NRHPGGGKRTAKRTWRDEVSPGIHHDMESILRKWLPPVLLARFEVP 101
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LJE4_ECTSI2.840e-7439.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDV7_9PHAE1.030e-5544.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG38_9PHAE8.340e-4041.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T4_ECTSI6.000e-3241.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP89_9PHAE2.350e-2941.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF6_ECTSI8.470e-2445.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:585553..597116 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons4
Model size1886
Cds size1200
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16786.1prot_C-linearis_contig90.16786.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig90 594894..596536 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930777.1206608-UTR-C-linearis_contig90:585552..5856271622930777.1206608-UTR-C-linearis_contig90:585552..585627Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 585553..585627 +
1690881244.7620173-UTR-C-linearis_contig90:585552..5856271690881244.7620173-UTR-C-linearis_contig90:585552..585627Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 585553..585627 +
1622930777.141646-UTR-C-linearis_contig90:594862..5948931622930777.141646-UTR-C-linearis_contig90:594862..594893Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 594863..594893 +
1690881244.7770793-UTR-C-linearis_contig90:594862..5948931690881244.7770793-UTR-C-linearis_contig90:594862..594893Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 594863..594893 +
1622930777.2091234-UTR-C-linearis_contig90:596536..5971161622930777.2091234-UTR-C-linearis_contig90:596536..597116Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 596537..597116 +
1690881244.821077-UTR-C-linearis_contig90:596536..5971161690881244.821077-UTR-C-linearis_contig90:596536..597116Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 596537..597116 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930777.1580617-CDS-C-linearis_contig90:594893..5951561622930777.1580617-CDS-C-linearis_contig90:594893..595156Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 594894..595156 +
1690881244.7953448-CDS-C-linearis_contig90:594893..5951561690881244.7953448-CDS-C-linearis_contig90:594893..595156Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 594894..595156 +
1622930777.1763446-CDS-C-linearis_contig90:595342..5955611622930777.1763446-CDS-C-linearis_contig90:595342..595561Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 595343..595561 +
1690881244.8042853-CDS-C-linearis_contig90:595342..5955611690881244.8042853-CDS-C-linearis_contig90:595342..595561Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 595343..595561 +
1622930777.19541-CDS-C-linearis_contig90:595818..5965361622930777.19541-CDS-C-linearis_contig90:595818..596536Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 595819..596536 +
1690881244.8125906-CDS-C-linearis_contig90:595818..5965361690881244.8125906-CDS-C-linearis_contig90:595818..596536Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 595819..596536 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig90.16786.1

>prot_C-linearis_contig90.16786.1 ID=prot_C-linearis_contig90.16786.1|Name=mRNA_C-linearis_contig90.16786.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=400bp
MVTTTAKIVFLLGWLSGLIVMFTMLQLGWLRGTYQYSPGPGQRRSQPLAI
ATSADAGYCPPCDALFSKLQRSPDSGNLVQRVEMQMRGEPKSGTTFMFHW
AHGAMVHACDSLNLSFGSKACRMSDEGQDLTGTPKPETVFLTFEPALGGD
DARCSCPGVERVEIIMTDNHKHMLPVWGSCLWQHSNGLAADEEECMSVAN
RPVQDHADLWNCVEQAGCEIWDDRPQFVMMRDPRPMAVSSYFYLQTHPET
RGGKHPALNMTVNDAVLMMLPGITRYIGLRFNLFQGLLERQSEVFWYDDA
LADPLQWHYRWLALAGLNLPGSVVRAASDASVRGEFDFWTEGGLNNHPGG
EEPSNKRSWKDEVSPRLHAEIDEIARRWLPPVVLAKIGLPLEARDPVGR*
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mRNA from alignment at C-linearis_contig90:585553..597116+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig90.16786.1 ID=mRNA_C-linearis_contig90.16786.1|Name=mRNA_C-linearis_contig90.16786.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11564bp|location=Sequence derived from alignment at C-linearis_contig90:585553..597116+ (Chordaria linearis ClinC8C monoicous)
ACGGGGTGCAAAGGCGACAGCGACAGCTTACGGGAAAGTGGAGACGGTGA
CACTACAGGAAGGTGGGCGCTGTTGGTGAGCCACGTTCCTTCTCGTCTCG
CTGCTCCTTGTTGTTCTTTGTTGTTCTTGGCAAGAACCTGGGTGGGAGCA
ATCCCACCGCACAATGGCTGTTTCTCTCGTCTCTTAGGTGGGGGAGATAC
GAGCGGCATGCGCCACGGCAATCATGTTGCTGCTTCGGTCAGGTTTTCAT
ACGATGATGCTGCATAGGACACGTCCATCCATGATTCCCAGTTTCTGAAA
GTTGATCTGATTCGGTACACACACGGCAACAGCAGGCAAGGTTGCTGGGT
AACATGAGCTAATTGATAATTCGTGTGCGGTACTGTCGGCCCCCTTGGAG
GGGCCCACGGGGTAAAGGCAGAGTCGTTCAAGACCGGTAGATGCGTCGTG
TATTATACCTGATATGCTTATGGTCACACACGGAAGTTGAGTATACATCC
AGGAAACTCAACATGGGGGCCACACACTCGATGGCATACCCCAATACTAT
CAATCCAACACGTCCCCCCCAATATATACCGCAATCCCCCGCCTCATCTC
CGTATATCTCTCATCCCTGTAACCAAGACAAGTGATGTCACGAGCATATG
TCTTTCATCCCCCTGCTCGTGGACTCACTATTGATCCCATCTCTTAACAA
CACAGACACTCTCCTCCAAAAACCCTTGAATACTTCAAATCAATCATAAA
CACCTCAAACACTATAGCCTGAGACTAAATTCTCTCTTAGAGCCTCGACT
AGACACATCCCGATTACTTTTAATACGACCAGACATCTTTCCACTCTTTC
TGCCTCTCTCATACCGATATTTGCCAAATCAAAAACAATTCAATTCAAAT
CCAAAACAATGATCCCAACAACGGTTAATTACTCCTTCATCGTACCACTT
ATCTCAAGTTCAAACATAAATTCTTCATTCATCAACAATCATCACAAAGT
ACCGCCAAGTTATCATACAGAGAAATGTCCTGTCCAACACCTCCCTCTAT
GTCTTTCCTTCTTTATGCTCCCTTAATTCCTCCCCATAAAGTCCATTATT
AAGCACAAACTACAGCAGTAGTGCCATCGCACCAGTTTCCCCATTATAAT
TCGCATCAAACTAGAATTCCTCCCCATAAAATCCTCATCAATCGCTACTC
CCTTTCATGTCAAACTGGCGTCCCACTCAACACAAAATTCCTCCTCGAAT
ATAACGCAACACAAATCAAACTACACAAAATTCCCCAAGACTCTCCAACC
AAACATTTCAGATACGTGGCCAACGCACCAGCAGTATTCGAATCAACAAA
CAATTAAGTAGGAGCCGAAACTCTTCATGACCCAAATTACTCCCACAAAG
AACCGTTCAATCAATCTTACCTCAACTTATTCCAATAAACGTATCACACC
AGACTCTCAAACCAAATTCATCACAATGTCCCGGTGAAACTCAAAAGCCT
CCTTGGCTAGTGCCTTTGTGAGGAAATCGGCATGCTGATAAGCCGACGGC
ACATGAATCACCTTAATCTCCTTCCTCTCAACTAACTCTCTCAGAAAGTG
GTGGCGCACATCAATGTGCTTCGAGTTCGAGTTGCTAATGGGGTTGTTCG
CCAACGAAATCGCCCCCTCGTTATCCTCAAACATCGGGATCAAAGGCATC
CCAGCCTTCGGTAGTAGGAAACGCCACACCTGCCTAAGGAACAACACTTC
CTTCGTTACATCGGCCAACGCTACATACTCCGCTTCAGTGGTCGAGGTGG
TCACACACTTATGCGTCCTAGAAAACCAAGACACAACACCACCCCCGCAC
ATCACAACACCTCCAGAAACACTTCGGCGGTCCGCTGCCTTGCTCGCAAA
GTCAGCATCGGCAAACGCTACAAGGCTCAAGCCCATCCCCTTTCCTTTCT
CAAACCCAATCCCATACGAACTCGTCCGCTTTACATAGCCCAAAACATCC
AGCGCTGCTTCCCAATGCAAAAGCTTCGGGTGGGCACAGTACCTCGCTAT
CGCTCTCGTTGCATTAGCAATGTCCGGTCTGGACGTCACGGCTAGCCACA
TCAGCGATCCGATCAGTTCACGGAAGGGCTTCATCACATCCTCCTCGTCA
ACATCAAAATCTCCAAGTCTCACTCCAACACCAAGCGGCACACTCTTTCC
AAACTCGATCCCATACTCCTTCGCCAACTCTAGAGCATAGGTCTCTTGTG
AAATAGTCAAGCGTCCCTTCTCCCTATCTCTCTCGTAGAAGCAACCCGAG
TACCAGCTCAGCGGTCCCAAGTCCTTCACAGGTACCATCTCTCCTAGATC
AGCACAAAATCTCTCATACCTCGCCTGTCCACCCACTGAGAAAACGTCAT
CAACGTGCACAACAATCGTGAGTACAACGCTATCATCCTCCATCAGTCTA
AACACACACGCATCAGCCAAACACTGCTCAAATCCCAAAGCCAACAAACA
CTTCTTCAAGTGCGAATGCCACTGCCGTGAAGCTTGCTTCAAGCCGTAAA
GACTCTTGGCTAGCTTCACTGTCAAACCAGACATCAAACCACACCCCTTC
GGCAGTCGCATGTAGACATCAACACCCTCCTCCAACTCAGCACTCACAAA
CGCCTGCTCAATGTCTAGGTGGTAAATCTCAAGGTCCAACTCGCAAGCAA
GCGCGGCCAACAATCGAACACACGGAACAGCAACAGTGGGCGCAAATACA
TCACCAAAATCAATATACTGCCTCTGTTGGTCCCCTCTCGCTACCAACCT
GGCCTTGACTTTGGTCGGCCAACCATACTGATCGCACTTCCAATCATACA
CCCACTGGGCGTTAATGCAGTTCTCTACGGATTGCTATTCCGCAACAGAA
AACGTCCGGCACTCAGGAGTCCGTGAATCTCCCGGTTCATGGCGTCCTCG
AACAGGTGGCTGTACTGGTTGCGCGGCGACGTCGCCTCGGCAAAAGTCTT
GGGCACGCGAAGGTCGCTCCCGTGGCACAGCGGCAGCTCCGGGCGATCGT
GCGGGGGCTGCTGCTCGCGTACGGCAGCCTCGATGTCCTCCCGGCGCGCA
AGACGCGTCGCGAGCGCGAACGGCATTCGCGCCGATTCTCCGGTCCCCCC
AAACCCCTGCTCCTCCTCCGGCTGCCCCGCCGACTTGATGGCATCCTGCG
CGGCGAGGGCAGACAGCAGAACATCCTTCCCGACGTCGCCGTCCTGAGCC
TCAAGAGCCGACAACAGGACGTCCTTCCCGGCGAAAGACATAAGCCCAAC
ATTGTGACCTTGGTTCCCCGCCGGCTTGGCCCCCGACCTGGTGCGGGTGG
CGAGGCGAACGTCGTCCATCCCCCGTACGGCCCGGGCGGAGTTCCTTGAT
GGCCCGGCGGGAAAGAGGCTCCATCGCCTCCGCCGGCGGCGGCGGCGGTG
ACGTGACAAGCGGCGGCGACGTGGCAGGTTCCGAGGCAGGCCAGGGCGGT
GGTGGTGGTGTCTGCTGCTGTGCGGCAAACGGCGGAGATGCAGAGATGCG
CGGCGGCAGCGCGGCGGGGGAATCGTGAACCCCCCCCCCCACGCCCGGCG
CTAGAGCCGCGGGGAACCGAAATCCCCGGCGGGGCCGATGCATCGCCGGC
GGAGACGCAGAGACGTCCGGCGGCAGTGCGGCGGGGGTACCGTTGATCCA
ACGTTGACACAGCAAGTCAGATCCCAAATTACTGCAAATCCAATCAAACC
AATCCGATCGCTGAGCGAGGTGCTCCAGCAGTTAAATCCAATGCCAACGC
AACACACGCAAACAAGAGACAAACCTTACAAACCAAGCCCAGAACCATAA
CCCTAAAGTCCATCGCCTACCCCCGCGGGTGCGACGCCATCTTCCGCCGC
GGCTCCATATGTATTGTCATCACCGGCCGCGGCGGATGCTGTCGCACAAG
TCCGCCTAGTTGTGAGGGCAAGGGTGTCGCTCCGCAAGGATTGACTCACA
GGGCGGGACGCGCACAGGGCAAAGGCGACAGGCCAGTGATAAGTTGACTG
CACTTAAAAGCGATGTGCAATGTATACTAAGTACACCCGACGGGATCCGT
ACGTTGGAAACAAGTGCAAATATATGTATAAATAGCGCGGGACACCTGTC
ATGCTGCTATCAAGTTTCACAGCGCATCCATTTCCGTCGCGCCCCAACAA
CGCTGTTACCTCACCTAAACCGGGAGTCCGGCGGCGGGAAAATGCCACTC
ACAGGTACTACGCCCGCGGAGGCGGCAGGAAAGCGTCCTCACTCGATATC
CCGCAAAACGGTTCACGACGGGGTCATTCCATGTCACTACATCGTCGTTC
TCGATGGGCGGGAACCCAACATCGTAGGCACTACACCGGAAAGTCCGGTG
GTTGCAAGGGGGCGGGGGCAAACCATCACGCAATTCATGCGAAGGCACGA
CACCGGCAACAGCAGCAGTACCGGTGGGCGGGAAACGGTCATCACCAGCA
CTGGGGACATGGGGGAAAGCGCCCCGGAGGGAAAGACCAAAAGCGGGCAG
TGCAGTCGCTACCTCGGGAACTGCCATGAAATAGAAGGGACGAGCCCTAT
GTGTTACATGCCAACCTGGAACAAGCGGACATATAGCAGTAGTGCCTCTT
TTCAGCAAGCATTCAAATATTAAATATTGTCACCGATGGGGCAGACTCAC
AAACAATGCTGCAACATTTACCCAGAAAATTCACCCCCGAAACCAACCGA
AACCGCAAGATAAATGCGACTCAAAATCAACACACATATATATATGATAT
CATAGAAAAAAAATTGAAGCCGAAAACGTGCCTTGATCTGGCAGCGTGCA
TAGCTCGTGCCAGTCTCCTTGTAATGTCTTCATCGTCCGCTGACGTCGAT
GGCATCTCCGTGATGGAAGGAATGTTCTTGGCTCCTGCTGCGCTGCTGTG
AAAGCTGTTGCTGTGAAAGCTGTGTCTCATCAGGGGGTTCCCGGCTCTGA
GTCTTCGGTCCGCCCTGGTCTTCAACATTGTTATACTCCTGTGTCTCGTC
AAGGCGCCGGCTCTGAGTCTCGGCAGTCCCCTGGTCTTCAACATGTTGTT
GTGCTCTCTCTGTAGATACCCTTCCTCTCTCTTTATACACCTGCCGAGCG
ACTTGAATGGCGTCCCATCCCGTCGCTCGAACTCGCTGCTGCTATCGACC
CTCTCATGAATTACACACAGGCAGGCACACACAGGCAGGCTGCTGTGTGT
GGTCTCTCACAGCACTCACCCACGAACCTCTTTGACGCTAGCGTAATTGA
TAATTCGTGTGCGGTACTGTCGGCCCCCTTGGAGGGGCCCACGGGGTAAA
GGCAGAGTCGTTCAAGACCGGTAGATGCGTCGTGTATTATACCTGATATG
CTTATGGTCACACACGGAAGTTGAGTACCGTAATATCCCTTGAGAACGCC
CCGGGGGGCGAAAATAGTACAGCGGTTAAAAAATCACCCCGGGGCGTTCT
CAAAGGTAGGGGGGCGATCTTTTGTCAGAGAAAAAGAACACCCCGGGGCG
AAATCACCCCGGGGGCGAACGGTCTTTTTTCAGAGAAAAGAACTCCCCGG
GGCGAAAACACCCCGGGGGCGTGGTGTACTTTTCCACACATGTGCACACC
CTTGCTGCGCAGAGCCCGCACGATGTCGGGCCTCGGTAGTATCTACGAGC
AAGCGTTCGCGCCGAAGAAAGACAAGGAGGACTCTACCAAGGACAAGGCG
GCGGCCCCTACCACGAAGAAGCAGAAGACGGGCGAGTGGGGATGCTTGCA
ACGGTCATCACCACCACCCGGGGATAAAGCCCCGAGGTCAAGAAAGCTCG
GGACAAACGAAAGTATCCCACCCCCAGCTTCACCCTCACTCGCGTCACAG
GGCCATCGGGGCGTTCGTCGTACGAACTCCGCCAAAAGGTCAAGGTGCTG
GACTTCAGCCGTCTCATCTGCGACGACGGCGAAGCAGTTGGGAAACGTGG
TGCAGCGACGGTGTTCGGCATCGATGTGAGGCTTCTGAGAGCTTGAGTGA
ACAGGAGAAGGAACTTCGGCAATCATTCCTAGCCGAAGGTTCCTACCACG
CGGGTCGCTCTCGCTCGTTGAACACCGGGCGCCAGGCCTCAACCCACGGC
GACGTCGAGGAGAGCATCGTGGACGAGATCAACACTCTTGGAAAGCAAGG
CATTGCGGTGACCGGCGACATCGTCATGGCAAAACTGCTCGCGATGATGC
CCAAGTTCCAGGGCGGGCTTCCGGATGTCGACAAGCCCGCAGAGATGGAA
ACCTTCCGGAAGAACTTCAAGAGGTGGTACTACAAGTTCCTCAAGAGGCA
CAGGTTCTCGATCCGTCGCAAGACAAGTGTCGGGCAGAAGAAGCCGGAGG
GTTGGGAGGGGAAGGCATGGGCCTTCATCCAGCAGCTGCGCTCGATACTG
CTTCGCCATGCCAAAGGAAGCCGTTGCCGCGAACAGGACAGCGGCAAAGG
CGGCAGCGGCAAAGGCGGGAGAGACGGTCGAGATCGAGATCGAAGAGACC
CCAGTGGCGGTGACTGCGGAGGAACTTTTGAGCGTGCAGGAGGACGTGTT
CAAGCTGCTCTACAACATGGACCAGACACCCATCCAAGCAGAGATGCCGC
AAGAGACCACGATCGCCAAGACTGGTGCGAAGGACGCTCGCATCGCGACA
GGAGGTAAGATCTTGCTTGTGCGTCAATTCAGATAACAACGATGGCTCAA
AACCCTGTCGGGACGAAAGTTCTCACTTTGCCAAAAAACAGAAAAATTGA
AGTGTGGCGACTTGCCAAAAATTCAGAATATAGAAGTGCGGCGACTTTTG
TTTGAAATTATTTTTTGTTTTTGCCGTCACCTCTCTCTCTCTCTCTCTCT
CCCCCTCTCCCTCGCTCTCTCGAACAATGTCGTTGCTTCTTCGTTCCTTC
ATCGTGATATGATGTATCCACGTTGTTGACAGTAACGGTCGCAATGCATA
ATAGGTAAAATAATCAATACATGACACCACCGTCTTGCCTGCGTCTTGCC
GTGTGTGCATGTTTATTATTTTTATTATGTGTTGTTCAATTATGCATATT
GTTTTACAATTAATAATATGAATGTACGAGTACTCTGTTTACCTTTTTGG
CGCTGACTGTGTTGGTTGTACCGTCTTTGTTTTAAATACACAACCTTTTG
TCCAAATACCGTATGTTGCTCACTTGCCTTTATCGTCCCCTCTCCTCAAT
CTGCTGTAATTTATTATGATCAGGGAAGGAGAAGCTGAGGTACACCGTGG
TGTTATCTGTGCGTGGTGACGGGAAGAAGGTGAAGCCTCGCATCATCTAC
AAGGGCACCCCGTTCGTCTCCAAGAAGACCAAGAAGGGTGCGTCGACCAA
GCCAGGCAAGAACACTCTGACGTACCAGCACATGCCGGCCAACCGAACGC
AGTTCGACTACCCGGCGGGCGGCGTAGGCCTCGGGGTGCAGAAGGCTTCA
TGGTGCGACACGACCCAGACCGACGCGTGGCTAACGGAGGAGTTCATGCG
CCGCCCCGGCGCCAGCGGTTTTCTCAGCCGGCCAGCATTCTCACGCTGGA
CGACTTCAAGTGCCACAAGGACGAAGCGTTCCAGCAGAAGCTGGCAAGCA
AGGCCAAGACGGAGGCGGTGATGATTCCTGGCGGGCTGACGCCGGTGGTC
CAGCCGCTCGACCGCAGCATCAACAAGGAGTTCAAGCGTGGGATGAGGGC
CAAGTACACCCACTGGGTGAAGGACGAGTTCGACCGCAATGGGCCTGGCA
AGGCAGTGGCGCCGAGCAGGGGGTGGTGGCGACGTGGGTGAAGGATGTGT
GGGCGAACATCTCGGTGAAGACGATCCTGTCGTGCTTCAAGGTGTGCGGC
CTCACCCTCAACCTGGACGGCAGCGAGGACCACGAGTGGTGCATCCACAC
CTTCGGCGAGGGGTACCGCGAGGTCCTTGTCGAGCAGCGGGTGGTGTGGG
AGCAAGCGCACGGCAAGGAACTGGAGCCTCTTCAGCTGCCGGTCGTTCCC
GAGGGTGGTGGAGGAGGGGCAGCGGGCGTGATCACGGTCACGGCAGCAGT
AGAGGAGGTCCAAGCTTCCCTGGCACCCAGCGAGTTCGACGACTCAGACG
ACGACTGCTGCGCAGTCGACCTAGTCGACCTCGTCGACTCGGACTCGGAG
GAAGAAGAAGAGGAGGAGGAGGAGGCGGAGTCGTAGGCAGCCTTTTGTCG
TTTAAGCAGGGTGGTATCGTGGTTCGCTTGGCCAACGTGGGTGGGCATCC
GGGTTGATGCTTTGTTGTGAAGGGAGCTGCGAGTCTTTACGGCTCTATTG
TGCATGGATACAATTGTGCCTCTTGGTTTGGTGTGCTTTGTCGCTGCTGT
ATTTTTTCTTTCGTGTACCGTGTCTTGTTTTCTCGTCGGGGTTGTGCTAG
GACGTATCGTTCGTGTGCTTGCAGTCACGGCAGGGTAATCGTATGAGAGA
ACGGCGCGTTGTGCTTTACGGGTCTGGTGTCTGGTGTCTTTGTGGTTCCA
TGTTTTGGCGTTGTGCAGAAATTGCCGGCAGCAGTATCAATGAACCAAGA
TGGAACGACCCTCCTGCAAAAATATACCATGTGCACCAAGCACAACAATT
AATTCATACAATGACGACAACGACAACGCCAGGCATGATAGCAACGATAA
TGTTCTAGCTGCCGCAATAAATGTGCGGTGCGTGCACACGAACGCCCCAC
GAGGCGTCCAAGAAACCAGTTGAAAAAAGATCGCCCCGGGGCGAACTCAA
AGGTAGGGGGGCGAAAAACAAAACATAAAAAAAAAAATGCGGCCCCGGGG
CGAACTCAAAGTTTTTGTGTATAAAAAACGATTTTAGGGGGGGGGGGGGC
GTTCTCTCTGAGGGGGGCGTTCTCAAGGGATATTACGGTATACATCCAGG
AAACTCAACATGGGGGCCACACACTCGATGGCATACCCCAATACTATCAA
TCCAACACGTCCCCCCCAATATATACCGCAATCCCCCGCCTCATCTCCGT
ATATCTCTCATCCCTGTAACCAAGACAAGTGATGTCACGAGCATATGTCT
TTCATGAGCGACGCGGGGCTTCTTTATTGTACTCTTGCTGTGTGTGCGAG
AGTGGCAAACGCATGGGTGTTCCCCGATTGCCTCGTTGGTGTTGATGTTC
ATGCTCGTCCCTAGTTCATGCCTGCAGGGTGAGGGTGAGAAGTGGTGATC
TGACCCCTGTCCACCTCCGTTCTGCCGTGTGTGTGCCGTGGTGTGTTGTT
GCGGCACCAGACTCGGCCCTTCAGCAGGTGGCGTCGGAACCATGGTGACG
ACTACGGCCAAGATCGTTTTTTTACTCGGCTGGTTGTCGGGGCTGATAGT
GATGTTCACGATGTTGCAGCTCGGTTGGCTGAGAGGCACGTACCAGTACT
CGCCAGGTCCGGGACAACGGCGGTCCCAGCCCCTTGCAATTGCAACATCT
GCAGACGCCGGGTACTGCCCCCCTTGCGACGCCCTGTTCTCCAAGCTTCA
AAGGAGCCCTGATTCCGGGAACCTTGTTCAGCGCGTGGAGATGCAGATGC
GCGGGTGAGTTTTGTTTTACTTTCCCCCCCCAGCCTGGTGAAGGAGAGAG
TGCCGCACCGAGCATTTCGACAATTTTGAAAGCAGTTGGTGAGCAGTCGG
AAGAGAGCGAAGAAGCTTTTTGTTGCTCTCCTCGTAGTGCTTTAACTTTC
CGTCTCCCTTGTCCTTGTCCCGCCTCCTGCGCATCGCTAGCGAGCCTAAA
TCAGGTACCACGTTCATGTTCCACTGGGCGCACGGGGCGATGGTTCACGC
CTGCGACTCGCTCAACTTATCGTTCGGCAGCAAGGCCTGCCGCATGAGCG
ACGAGGGACAAGATTTGACGGGAACTCCTAAACCGGAAACCGTTTTTCTC
ACATTCGAGCCGGCATTAGGCGGCGACGACGCCAGATGTTCATGTCCTGG
AGTAGAGAGGTACACCTACGGTGCATTTGGAGGTCAATTAAGGGATGTTC
GTTTCTTCTTCTTCCCGCAGCTCTGCGACGGGTGCAGTTAGACTCAGGAC
GCGGGAAAGGGTAAAGGCAAGCAAAACTGCTCGCGCGCAACTATTGATTA
TTACATGCCCCAGCTCCAGTTCTGCGATCGTTACTGGACAATTGACACCG
CTGACTCCCGCTGATGCCAAAACATACATGCGCTCGTGTTATAATGCATG
CCTTCGCTTGGAGCAGGGTCGAGATCATCATGACCGACAACCACAAGCAC
ATGCTCCCGGTGTGGGGGTCTTGCTTGTGGCAGCACAGCAACGGGCTGGC
CGCTGACGAGGAGGAGTGCATGTCCGTCGCCAACAGACCGGTACAGGACC
ACGCCGACTTGTGGAACTGCGTCGAGCAGGCGGGCTGTGAGATCTGGGAC
GATCGCCCCCAGTTCGTGATGATGCGCGACCCTCGCCCGATGGCGGTGAG
CTCCTATTTTTACCTCCAGACGCACCCCGAGACCAGGGGGGGGAAACACC
CAGCGCTAAACATGACAGTAAACGACGCTGTGCTGATGATGCTGCCCGGC
ATTACCCGGTACATCGGCCTGCGCTTCAACCTGTTCCAAGGGCTGCTGGA
GAGGCAGAGCGAGGTGTTCTGGTACGACGACGCCTTGGCCGACCCGCTGC
AGTGGCACTACCGCTGGCTTGCCTTGGCGGGTTTAAACCTCCCCGGATCA
GTGGTTCGAGCGGCTTCGGATGCCTCAGTGAGAGGGGAGTTTGACTTCTG
GACAGAGGGAGGGCTCAACAATCACCCCGGCGGGGAGGAGCCGTCCAACA
AACGCTCATGGAAGGACGAAGTCAGCCCAAGACTGCACGCCGAGATAGAC
GAAATAGCGCGCCGATGGCTGCCGCCCGTCGTGCTGGCGAAGATAGGCTT
GCCGCTTGAAGCTCGAGATCCCGTAGGACGATGAATTTGACCCTCGTTGA
CGTAGGACAAATGTTAATGTTTTAGCTGGTACAGCAACAGCAGCGAGAAG
GGTGCATGCATGTATGTATGTTTGTATGCATGTATATAGAAGGAAAGGGG
TGGTTTGTAGGGTTGGGATGGTGTGTATGGTAGTTCCGGCCGAGAGGCCG
ATGTTTTTCGATTGCCAGTAGGACCGCACATGTTCGGCCAACGGGTGGTT
CCCGACGAGGTGTTGTTTTTTGCAACGGGATACGTGTAGGGAGGAAAACT
CATTCGGGTCAGCGAAAAATTTCAAGTTCTTCAGCTCTAAACTGAACCCA
TGCACGAACCTCCCTCGTTTGGGATAGACACCCCGTACCGTGAGTGTCGA
ATAGTCTACGTGCCTGATGGTTCACTATGGCCCGGGTGCATCCTCGAGGT
CGTTTGAGGCTCTGCGCAGTTGTACCCAGTGCATATAGTGCATGTAGTGC
ATGATCTTTTTGCCGATGTGATGCCCTACATTCCGAACGAATGCTCTATG
GCTTACCGAACCGTATTACATAGTTGTCGAACCGTTCTCCGGCCTATGAG
GGGTGGGGTACATT
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Coding sequence (CDS) from alignment at C-linearis_contig90:585553..597116+

>mRNA_C-linearis_contig90.16786.1 ID=mRNA_C-linearis_contig90.16786.1|Name=mRNA_C-linearis_contig90.16786.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2400bp|location=Sequence derived from alignment at C-linearis_contig90:585553..597116+ (Chordaria linearis ClinC8C monoicous)
ATGGTGACGACTACGGCCAAGATCGTTTTTTTACTCGGCTGGTTGTCGGG
GCTGATAGTGATGTTCACGATGTTGCAGCTCGGTTGGCTGAGAGGCACGT
ACCAGTACTCGCCAGGTCCGGGACAACGGCGGTCCCAGCCCCTTGCAATT
GCAACATCTGCAGACGCCGGGTACTGCCCCCCTTGCGACGCCCTGTTCTC
CAAGCTTCAAAGGAGCCCTGATTCCGGGAACCTTGTTCAGCGCGTGGAGA
TGCAGATGCGCGGATGGTGACGACTACGGCCAAGATCGTTTTTTTACTCG
GCTGGTTGTCGGGGCTGATAGTGATGTTCACGATGTTGCAGCTCGGTTGG
CTGAGAGGCACGTACCAGTACTCGCCAGGTCCGGGACAACGGCGGTCCCA
GCCCCTTGCAATTGCAACATCTGCAGACGCCGGGTACTGCCCCCCTTGCG
ACGCCCTGTTCTCCAAGCTTCAAAGGAGCCCTGATTCCGGGAACCTTGTT
CAGCGCGTGGAGATGCAGATGCGCGGCGAGCCTAAATCAGGTACCACGTT
CATGTTCCACTGGGCGCACGGGGCGATGGTTCACGCCTGCGACTCGCTCA
ACTTATCGTTCGGCAGCAAGGCCTGCCGCATGAGCGACGAGGGACAAGAT
TTGACGGGAACTCCTAAACCGGAAACCGTTTTTCTCACATTCGAGCCGGC
ATTAGGCGGCGACGACGCCAGATGTTCATGTCCTGGAGTAGAGAGCGAGC
CTAAATCAGGTACCACGTTCATGTTCCACTGGGCGCACGGGGCGATGGTT
CACGCCTGCGACTCGCTCAACTTATCGTTCGGCAGCAAGGCCTGCCGCAT
GAGCGACGAGGGACAAGATTTGACGGGAACTCCTAAACCGGAAACCGTTT
TTCTCACATTCGAGCCGGCATTAGGCGGCGACGACGCCAGATGTTCATGT
CCTGGAGTAGAGAGGGTCGAGATCATCATGACCGACAACCACAAGCACAT
GCTCCCGGTGTGGGGGTCTTGCTTGTGGCAGCACAGCAACGGGCTGGCCG
CTGACGAGGAGGAGTGCATGTCCGTCGCCAACAGACCGGTACAGGACCAC
GCCGACTTGTGGAACTGCGTCGAGCAGGCGGGCTGTGAGATCTGGGACGA
TCGCCCCCAGTTCGTGATGATGCGCGACCCTCGCCCGATGGCGGTGAGCT
CCTATTTTTACCTCCAGACGCACCCCGAGACCAGGGGGGGGAAACACCCA
GCGCTAAACATGACAGTAAACGACGCTGTGCTGATGATGCTGCCCGGCAT
TACCCGGTACATCGGCCTGCGCTTCAACCTGTTCCAAGGGCTGCTGGAGA
GGCAGAGCGAGGTGTTCTGGTACGACGACGCCTTGGCCGACCCGCTGCAG
TGGCACTACCGCTGGCTTGCCTTGGCGGGTTTAAACCTCCCCGGATCAGT
GGTTCGAGCGGCTTCGGATGCCTCAGTGAGAGGGGAGTTTGACTTCTGGA
CAGAGGGAGGGCTCAACAATCACCCCGGCGGGGAGGAGCCGTCCAACAAA
CGCTCATGGAAGGACGAAGTCAGCCCAAGACTGCACGCCGAGATAGACGA
AATAGCGCGCCGATGGCTGCCGCCCGTCGTGCTGGCGAAGATAGGCTTGC
CGCTTGAAGCTCGAGATCCCGTAGGACGATGAGGTCGAGATCATCATGAC
CGACAACCACAAGCACATGCTCCCGGTGTGGGGGTCTTGCTTGTGGCAGC
ACAGCAACGGGCTGGCCGCTGACGAGGAGGAGTGCATGTCCGTCGCCAAC
AGACCGGTACAGGACCACGCCGACTTGTGGAACTGCGTCGAGCAGGCGGG
CTGTGAGATCTGGGACGATCGCCCCCAGTTCGTGATGATGCGCGACCCTC
GCCCGATGGCGGTGAGCTCCTATTTTTACCTCCAGACGCACCCCGAGACC
AGGGGGGGGAAACACCCAGCGCTAAACATGACAGTAAACGACGCTGTGCT
GATGATGCTGCCCGGCATTACCCGGTACATCGGCCTGCGCTTCAACCTGT
TCCAAGGGCTGCTGGAGAGGCAGAGCGAGGTGTTCTGGTACGACGACGCC
TTGGCCGACCCGCTGCAGTGGCACTACCGCTGGCTTGCCTTGGCGGGTTT
AAACCTCCCCGGATCAGTGGTTCGAGCGGCTTCGGATGCCTCAGTGAGAG
GGGAGTTTGACTTCTGGACAGAGGGAGGGCTCAACAATCACCCCGGCGGG
GAGGAGCCGTCCAACAAACGCTCATGGAAGGACGAAGTCAGCCCAAGACT
GCACGCCGAGATAGACGAAATAGCGCGCCGATGGCTGCCGCCCGTCGTGC
TGGCGAAGATAGGCTTGCCGCTTGAAGCTCGAGATCCCGTAGGACGATGA
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