prot_C-linearis_contig90.16778.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5KYQ2_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ2_9PHAE) HSP 1 Score: 132 bits (332), Expect = 3.910e-33 Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0
Query: 4 IDFLATLDDLRLRLEEMGEPTTDETYEDLVMVALTSSPEYSFLREMNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVAASTVQCFNCQEYGHYQRDCPASLPAAAAAVSGKP 125
IDF + +LRLRLE +GE +D+ Y D+ + LTS PE+ F+REM+ R +F VD+L+ TAT F+D QSRK++GPAVSGRGAAM A+S+ QC C+E+GH+QRDCP S P + A KP
Sbjct: 142 IDFFSKACELRLRLETLGETVSDDVYLDITLSGLTSVPEFHFIREMHYRNEFTSVDDLQDTATRFFVDQQSRKAAGPAVSGRGAAMAASSSDQCHRCKEFGHFQRDCPKSAPPSRARKGKKP 263
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE) HSP 1 Score: 132 bits (332), Expect = 4.080e-33 Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0
Query: 4 IDFLATLDDLRLRLEEMGEPTTDETYEDLVMVALTSSPEYSFLREMNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVAASTVQCFNCQEYGHYQRDCPASLPAAAAAVSGKP 125
IDF + +LRLRLE +GE +D+ Y D+ + LTS PE+ F+REM+ R +F VD+L+ TAT F+D QSRK++GPAVSGRGAAM A+S+ QC C+E+GH+QRDCP S P + A KP
Sbjct: 142 IDFFSKACELRLRLETLGETVSDDVYLDITLSGLTSVPEFHFIREMHYRNEFTSVDDLQDTATRFFVDQQSRKAAGPAVSGRGAAMAASSSDQCHRCKEFGHFQRDCPKSAPPSRARKGKKP 263
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 132 bits (332), Expect = 4.170e-33 Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0
Query: 4 IDFLATLDDLRLRLEEMGEPTTDETYEDLVMVALTSSPEYSFLREMNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVAASTVQCFNCQEYGHYQRDCPASLPAAAAAVSGKP 125
IDF + +LRLRLE +GE +D+ Y D+ + LTS PE+ F+REM+ R +F VD+L+ TAT F+D QSRK++GPAVSGRGAAM A+S+ QC C+E+GH+QRDCP S P + A KP
Sbjct: 142 IDFFSKACELRLRLETLGETVSDDVYLDITLSGLTSVPEFHFIREMHYRNEFTSVDDLQDTATRFFVDQQSRKAAGPAVSGRGAAMAASSSDQCHRCKEFGHFQRDCPKSAPLSRARKGKKP 263
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 132 bits (332), Expect = 4.190e-33 Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0
Query: 4 IDFLATLDDLRLRLEEMGEPTTDETYEDLVMVALTSSPEYSFLREMNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVAASTVQCFNCQEYGHYQRDCPASLPAAAAAVSGKP 125
IDF + +LRLRLE +GE +D+ Y D+ + LTS PE+ F+REM+ R +F VD+L+ TAT F+D QSRK++GPAVSGRGAAM A+S+ QC C+E+GH+QRDCP S P + A KP
Sbjct: 142 IDFFSKACELRLRLETLGETVSDDVYLDITLSGLTSVPEFHFIREMHYRNEFTSVDDLQDTATRFFVDQQSRKAAGPAVSGRGAAMAASSSDQCHRCKEFGHFQRDCPKSAPPSRARKGKKP 263
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5JU11_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU11_9PHAE) HSP 1 Score: 121 bits (304), Expect = 2.370e-29 Identity = 58/106 (54.72%), Postives = 80/106 (75.47%), Query Frame = 0
Query: 4 IDFLATLDDLRLRLEEMGEPTTDETYEDLVMVALTSSPEYSFLREMNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVAASTVQCFNCQEYGHYQRD 109
IDF + +LRLRLE +GE +D+ Y D+ + LTS PE+ F+REM+ R +F VD+L+ TAT F+D QSRK++GPAVSGRGAAM A+S+ QC C+E+GH+QR+
Sbjct: 142 IDFFSKACELRLRLETLGETVSDDVYLDITLSGLTSVPEFHFIREMHYRNEFTSVDDLQDTATRFFVDQQSRKAAGPAVSGRGAAMAASSSDQCHRCKEFGHFQRE 247
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE) HSP 1 Score: 114 bits (285), Expect = 4.390e-27 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = 0
Query: 5 DFLATLDDLRLRLEEMGEPTTDETYEDLVMVALTSSPEYSFLREMNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVA-ASTVQCFNCQEYGHYQRDC 110
DFLA +DDLRLRLE+MGE DE+YED+++ AL S EY F+R+ +++ + + E++TT N ++D SRKSSGP+V+GRG AM A +S VQC NCQE+GHY +C
Sbjct: 99 DFLAKMDDLRLRLEDMGEKIPDESYEDVLLRAL--SKEYYFIRQTSHKDRTFGLTEIRTTMVNMYIDELSRKSSGPSVAGRGVAMSAESSNVQCRNCQEFGHYANEC 203
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.330e-24 Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 0
Query: 4 IDFLATLDDLRLRLEEMGEPTTDETYEDLVMVALTSSPEYSFLREMNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVAASTV-QCFNCQEYGHYQRDCP 111
IDF DL+LRL +GE + Y D+++ LT +PE++F+REM+ R VD L+ TA F+D QSR +SGP VSGRGAAM AAS+ QC C+EYG +QRDCP
Sbjct: 150 IDFFTKGWDLKLRLMVLGEEVSSPVYLDIMLSGLTKAPEFTFIREMHYRDNIASVDSLQATANRIFVDQQSRNASGPMVSGRGAAMAAASSSDQCHRCKEYGPFQRDCP 258
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 2.340e-17 Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0
Query: 49 MNNRTQFLDVDELKTTATNRFLDAQSRKSSGPAVSGRGAAMVAASTVQCFNCQEYGHYQRDCPASLPAAAAAVSGKP 125
M+ R +F VD L+ TAT F+D QSRK++GPAVSGRGAAM A+S+ QC C+E+GH+QRDCP S P + A KP
Sbjct: 1 MHYRNEFTSVDGLQDTATRFFVDQQSRKAAGPAVSGRGAAMAASSSDQCHRCKEFGHFQRDCPKSAPPSRARKGKKP 77 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 8
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig90.16778.1 ID=prot_C-linearis_contig90.16778.1|Name=mRNA_C-linearis_contig90.16778.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=138bpback to top |