prot_C-linearis_contig90.16777.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16777.1
Unique Nameprot_C-linearis_contig90.16777.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length153
Homology
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BLAST of mRNA_C-linearis_contig90.16777.1 vs. uniprot
Match: D7FTP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP5_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.420e-20
Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 0 
Query:   41 GPGSDGNVTGCVPSAGLDDHRSYVGTFHRWCEECGKTSPGKSRFYVFKGIPTLNNGRESNAGAATSLTNGSCRQMCLPCDKHG 123
            G G D   T    SAG+D HR++VG F+RWCE+C + S  +S FY + GIPTLN GR + A        G CRQMCLPCDK G
Sbjct:   26 GAGRDPTAT----SAGMDSHRTFVGRFYRWCEDCKEASARESDFYEYSGIPTLNGGRPTPALPPHYTAKGLCRQMCLPCDKGG 104
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTP5_ECTSI1.420e-2051.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:440346..441676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16777.1mRNA_C-linearis_contig90.16777.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 439492..441676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16777.1 ID=prot_C-linearis_contig90.16777.1|Name=mRNA_C-linearis_contig90.16777.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=153bp
ANSCHEDGCSCEKAGEGCTCVDHVHVKNNSVGGQALGIGCGPGSDGNVTG
CVPSAGLDDHRSYVGTFHRWCEECGKTSPGKSRFYVFKGIPTLNNGRESN
AGAATSLTNGSCRQMCLPCDKHGEIAALATEYPASDRLSSDRCRVLARDH
VA*
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