prot_C-linearis_contig9.16543.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16543.1
Unique Nameprot_C-linearis_contig9.16543.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length59
Homology
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BLAST of mRNA_C-linearis_contig9.16543.1 vs. uniprot
Match: D7FQY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY1_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.060e-21
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 
Query:    1 LGNVLIKASAGAANHGKFEIEYGNEVMIASLKKLIISIPRWTHLFPDTPKREALAGVR 58
            LGNVLIK+SA   NH KFEIEYG+E MIA LK+LI  IP+WTHLFPDTPK EALAGVR
Sbjct:  740 LGNVLIKSSADPVNHRKFEIEYGSETMIAPLKQLIEIIPKWTHLFPDTPKHEALAGVR 797
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQY1_ECTSI2.060e-2177.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1236146..1236322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16543.1mRNA_C-linearis_contig9.16543.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1236146..1236322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16543.1 ID=prot_C-linearis_contig9.16543.1|Name=mRNA_C-linearis_contig9.16543.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=59bp
LGNVLIKASAGAANHGKFEIEYGNEVMIASLKKLIISIPRWTHLFPDTPK
REALAGVR*
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