prot_C-linearis_contig89.16401.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16401.1
Unique Nameprot_C-linearis_contig89.16401.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length181
Homology
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: A0A6H5KRM5_9PHAE (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRM5_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 6.460e-96
Identity = 138/174 (79.31%), Postives = 155/174 (89.08%), Query Frame = 0
Query:    2 SSDENDTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSILRAETDLSTLRECDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRKTAEQEQ 175
            SSDE +  AVYMRLAL++AE+AL  GEVPVGCV+VH PTAR++SCGHNETSEAFNATRHAELVAID ILRA+TDL  L ECDL+VTCEPCIMCAAALR+VKIK VVFGCSN+RFGGCGSVLSVH+ SLPM+GHTYPC SGLLADEA+AL KQFYS +N +AP PKRRKT + EQ
Sbjct:    9 SSDEQN--AVYMRLALKEAEMALSKGEVPVGCVVVHKPTARIISCGHNETSEAFNATRHAELVAIDGILRAQTDLCLLSECDLFVTCEPCIMCAAALRDVKIKTVVFGCSNDRFGGCGSVLSVHDGSLPMSGHTYPCHSGLLADEAIALFKQFYSRQNVKAPEPKRRKTGQHEQ 180          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: A0A482UKK3_9ARCH (Nucleoside deaminase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UKK3_9ARCH)

HSP 1 Score: 175 bits (443), Expect = 7.210e-53
Identity = 88/163 (53.99%), Postives = 110/163 (67.48%), Query Frame = 0
Query:    7 DTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSILRAETDLSTLRECDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRK 169
            D V  +M+LA+QQAEIA+ + EVPVGCV V   T  V+  G N+T+   NATRHAELVAID+IL     +   + CDLYVTCEPCIMCAAAL +++I  V FGC N+RFGG GS+L +H        H Y   SG+L DEA+ + ++FY  EN RAP  KRRK
Sbjct:    2 DEVKNFMKLAIQQAEIAIEHSEVPVGCVFVDRTTKEVLGSGFNQTNLTLNATRHAELVAIDAILSHGHSVEAFKNCDLYVTCEPCIMCAAALAKLQIAKVFFGCHNDRFGGNGSILHIHTNPYG-NAHAYDVESGVLKDEAIEIFQRFYDRENERAPESKRRK 163          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: R4XI84_TAPDE (tRNA-specific adenosine deaminase subunit tad2 n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XI84_TAPDE)

HSP 1 Score: 171 bits (434), Expect = 4.390e-51
Identity = 84/164 (51.22%), Postives = 112/164 (68.29%), Query Frame = 0
Query:    2 SSDENDTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSILRAETDLSTLRECDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVP 165
            ++DE+     +M++ALQQAE AL N EVPVGCV VH PT  V++ G N+T+ + N T HAE VAI+SILR     S  RE DLYVT EPC+MCA+ALR+++++ V FGC N+RFGGCGSV S+H+ +       Y   SG+   EA+ LL++FY  +N  AP P
Sbjct:   20 AADESGAADAFMQIALQQAETALLNKEVPVGCVFVHQPTGTVLATGANQTNASLNGTLHAEFVAIESILRDHPP-SIFRESDLYVTVEPCVMCASALRQLQVRKVYFGCGNDRFGGCGSVFSIHSDASKTGDAAYMVESGIFRKEAIMLLRRFYLLQNESAPKP 182          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: A0A4U5UP48_COLLU (tRNA-specific adenosine deaminase 2 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4U5UP48_COLLU)

HSP 1 Score: 169 bits (427), Expect = 3.380e-50
Identity = 91/168 (54.17%), Postives = 113/168 (67.26%), Query Frame = 0
Query:    7 DTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSILR--AETDLSTLRECD---LYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRK 169
            + +  +M  A   A+ AL NGEVPVGC++V+G    VV  G NE +E  NATRHAE+VA+D +L      +L T   C+   LYVT EPCIMCAAALR +++ +VV+GC N RFGGCGSVL V +A+LP TG T+ C SG  ADEAV +LK FY  EN  AP PK RK
Sbjct:   17 EEIEKWMDSAFDMAKDALENGEVPVGCLMVYGD--EVVGKGRNEVNETKNATRHAEMVALDQLLDWCRSRNLDTRSVCERTALYVTVEPCIMCAAALRLIRLPVVVYGCRNERFGGCGSVLDVSSANLPQTGTTFKCVSGHRADEAVEMLKTFYKQENPNAPKPKTRK 182          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: UPI001113DA8E (tRNA-specific adenosine deaminase 2 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=UPI001113DA8E)

HSP 1 Score: 168 bits (425), Expect = 8.960e-50
Identity = 91/169 (53.85%), Postives = 112/169 (66.27%), Query Frame = 0
Query:    6 NDTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSIL----RAETDL-STLRECDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRK 169
            +D +  +M  A   A  AL NGEVPVGC++V+     VV  G NE +E  NATRHAE+VA+D +L    R++ D+ S   +  LYVT EPCIMCAAALR + + +VVFGC N RFGGCGSVL V +A LP TG T+ C SG  A+EAV +LK FY  EN  AP PK RK
Sbjct:   19 DDDIEKWMAKAFDMAREALENGEVPVGCLMVYND--EVVGKGRNEVNETKNATRHAEMVALDQLLDWCHRSKQDVQSVCEQSALYVTVEPCIMCAAALRLLNVPVVVFGCRNERFGGCGSVLDVSSADLPQTGATFKCVSGHRAEEAVEMLKSFYKQENPNAPKPKTRK 185          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: A0A4D9D5M2_9STRA (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5M2_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.750e-49
Identity = 86/176 (48.86%), Postives = 110/176 (62.50%), Query Frame = 0
Query:   12 YMRLALQQAEIALRNGEVPVGCVIVHGPTA------------------RVVSCGHNETSEAFNATRHAELVAIDSILRAETDLSTLRECDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRK 169
            +M++AL + +IA+  GEVPVG V VH P +                  +++  GHN T+   N TRHAELV +D IL      S  +ECD+YVTCEPCIMCA AL  +KI+ VVFGC N+RFGGCGS+LSVH A  P   H Y   +GL+ +EA+ L K FY+ EN +AP  KRRK
Sbjct:   11 FMKIALAEGQIAIEEGEVPVGVVFVHRPDSPKNTACSIDSSVSVSGPGKILGKGHNRTNATKNGTRHAELVIVDEILARGNPPSVFQECDVYVTCEPCIMCAGALSLLKIRRVVFGCKNDRFGGCGSILSVHGA--PHLRHRYVADAGLMENEAITLFKSFYARENRQAPDTKRRK 184          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: A0A6G0I5R6_LARCR (tRNA-specific adenosine deaminase 2 n=2 Tax=Eupercaria TaxID=1489922 RepID=A0A6G0I5R6_LARCR)

HSP 1 Score: 166 bits (420), Expect = 3.890e-49
Identity = 93/172 (54.07%), Postives = 113/172 (65.70%), Query Frame = 0
Query:    3 SDENDTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSILR--AETDLSTLRECD---LYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRK 169
            SDE   +  +M  A   A+ AL NGEVPVGC++V+     VV  G NE +E  NATRHAE+VA+D +L      +L T   C+   LYVT EPCIMCAAALR + + +VV+GC N RFGGCGSVL V +A+LP TG T+ C SG  ADEAV +LK FY  EN  AP PK RK
Sbjct:   15 SDEE--IEKWMDSAFDMAKDALENGEVPVGCLMVYSD--EVVGKGRNEVNETKNATRHAEMVALDQLLDWCRSRNLDTRSVCERTALYVTVEPCIMCAAALRLISLPVVVYGCRNERFGGCGSVLDVSSANLPQTGTTFKCVSGHRADEAVEMLKTFYKQENPNAPKPKTRK 182          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: UPI00189E407C (tRNA-specific adenosine deaminase 2 isoform X1 n=2 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189E407C)

HSP 1 Score: 166 bits (419), Expect = 5.510e-49
Identity = 93/172 (54.07%), Postives = 115/172 (66.86%), Query Frame = 0
Query:    3 SDENDTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSIL----RAETDLSTL-RECDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRK 169
            SDE   V  +M  A   A+ AL NGEVPVGC++V+G    VV  G NE +E  NATRHAE+VA+D +L    R+  D+S + +   LYVT EPCIMCAAALR + I +V++GC N RFGGCGSVL V +A LP TG T+ C SG  A+EAV +LK FY  EN  AP P+ RK
Sbjct:   15 SDEE--VERWMSSAFNMAKDALENGEVPVGCLMVYGD--EVVGKGRNEVNETKNATRHAEMVALDQLLDWCRRSNLDVSGVCKRTALYVTVEPCIMCAAALRLLNIPVVMYGCRNERFGGCGSVLDVSSADLPQTGTTFKCVSGHRAEEAVEMLKSFYKQENPNAPKPRTRK 182          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: A0A6J8E093_MYTCO (tRNA-specific adenosine deaminase 2 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8E093_MYTCO)

HSP 1 Score: 165 bits (418), Expect = 5.910e-49
Identity = 83/162 (51.23%), Postives = 113/162 (69.75%), Query Frame = 0
Query:   12 YMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSILR--AETDLST---LRECDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRR 168
            +M      AE AL++GEVPVGC++V+    + ++ G NE +E  NATRHAE+VAID +L+   E DL +    REC LYVT EPCIMCA ALR+V+I +V++GC+N+RFGGCGS+L VH+A LP  G +  C S ++A+ A+ LLK FY  +N  AP  KR+
Sbjct:   11 WMEKTFDLAEEALKSGEVPVGCLLVYD--GKEIAVGRNEVNETKNATRHAEIVAIDKVLKFSEENDLDSKAVFRECILYVTVEPCIMCAGALRQVEIPLVIYGCANDRFGGCGSILPVHSAELPSLGPSLQCISNVMAERAIQLLKDFYKGQNLNAPENKRK 170          
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Match: A0A6P8TNN6_GYMAC (tRNA-specific adenosine deaminase 2 isoform X1 n=5 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8TNN6_GYMAC)

HSP 1 Score: 165 bits (417), Expect = 9.490e-49
Identity = 93/179 (51.96%), Postives = 118/179 (65.92%), Query Frame = 0
Query:    1 MSSDEN-----DTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNETSEAFNATRHAELVAIDSIL----RAETDLSTLRE-CDLYVTCEPCIMCAAALREVKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVALLKQFYSTENTRAPVPKRRK 169
            M +DE+     + +  +M  A   A  AL+NGEVPVGC++V+     VV  G NE +E  NATRHAE+VA+D +     R+  D+  + E   LYVT EPCIMCAAALR  K+ +VVFGC N+RFGGCGSVL V +A LP+TG+T+ C SG  A+EAV +LK FY  EN  AP PK RK
Sbjct:    1 MGTDESFYPSEEEIEKWMSSAFDMAREALQNGEVPVGCLLVYNH--EVVGKGRNEVNETKNATRHAEMVALDQLQDWCRRSNLDVRCVCERTALYVTVEPCIMCAAALRLFKLPVVVFGCRNDRFGGCGSVLDVASADLPLTGNTFKCVSGHRAEEAVEMLKTFYRQENPNAPKPKTRK 177          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRM5_9PHAE6.460e-9679.31CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A482UKK3_9ARCH7.210e-5353.99Nucleoside deaminase n=1 Tax=archaeon TaxID=190666... [more]
R4XI84_TAPDE4.390e-5151.22tRNA-specific adenosine deaminase subunit tad2 n=1... [more]
A0A4U5UP48_COLLU3.380e-5054.17tRNA-specific adenosine deaminase 2 n=2 Tax=Percom... [more]
UPI001113DA8E8.960e-5053.85tRNA-specific adenosine deaminase 2 n=1 Tax=Echene... [more]
A0A4D9D5M2_9STRA1.750e-4948.86CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A6G0I5R6_LARCR3.890e-4954.07tRNA-specific adenosine deaminase 2 n=2 Tax=Euperc... [more]
UPI00189E407C5.510e-4954.07tRNA-specific adenosine deaminase 2 isoform X1 n=2... [more]
A0A6J8E093_MYTCO5.910e-4951.23tRNA-specific adenosine deaminase 2 n=3 Tax=Mytilu... [more]
A0A6P8TNN6_GYMAC9.490e-4951.96tRNA-specific adenosine deaminase 2 isoform X1 n=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 12..109
e-value: 2.4E-22
score: 78.7
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 7..129
score: 29.689
NoneNo IPR availableGENE3D3.40.140.10coord: 2..169
e-value: 7.2E-63
score: 213.3
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASE FAMILY MEMBERcoord: 7..168
NoneNo IPR availablePANTHERPTHR11079:SF149TRNA-SPECIFIC ADENOSINE DEAMINASE 2coord: 7..168
IPR016192APOBEC/CMP deaminase, zinc-bindingPROSITEPS00903CYT_DCMP_DEAMINASES_1coord: 60..98
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 6..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:252979..256680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16401.1mRNA_C-linearis_contig89.16401.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 252332..256740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16401.1 ID=prot_C-linearis_contig89.16401.1|Name=mRNA_C-linearis_contig89.16401.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=181bp
MSSDENDTVAVYMRLALQQAEIALRNGEVPVGCVIVHGPTARVVSCGHNE
TSEAFNATRHAELVAIDSILRAETDLSTLRECDLYVTCEPCIMCAAALRE
VKIKMVVFGCSNNRFGGCGSVLSVHNASLPMTGHTYPCRSGLLADEAVAL
LKQFYSTENTRAPVPKRRKTAEQEQAAESR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016192APOBEC/CMP_deaminase_Zn-bd
IPR016193Cytidine_deaminase-like