prot_C-linearis_contig88.16335.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16335.1
Unique Nameprot_C-linearis_contig88.16335.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length610
Homology
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: D7FM70_ECTSI (LisH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM70_ECTSI)

HSP 1 Score: 721 bits (1861), Expect = 2.000e-254
Identity = 508/640 (79.38%), Postives = 520/640 (81.25%), Query Frame = 0
Query:    1 MKPWKENGAAISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVG-----------------------GEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLF--------KGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            MKPWKENG AISSEEVNFLV+RYLQESGFAHSAFTFAYESQITKSSVAEAQ   VAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGV+ N       GGG                          GEG  RGG E    XXXXXXXXXXXXXXXXXXXXXXXXXXX                                    + G+AM  EVDT  GEERG    +G+  XXXXXXXXXXXXXX      EG          KGG   C EIP+GDVAVL NHHSEVFMCAWNPKYDLLASGSGDSTARIW ISPKLRGSKVAEEASRTS VLKHS+EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARG+VQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCV+GEEYPRQTFTGH DEVNAIKWDPSG+ LASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTS V VMD+RM
Sbjct:    1 MKPWKENGTAISSEEVNFLVYRYLQESGFAHSAFTFAYESQITKSSVAEAQ---VAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVRRN----AVEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXGEGFHRGGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXMANTGEAM--EVDT--GEERG----YGEXXXXXXXXXXXXXXXXXXXANGEGAMGISIGDGLKGGPAGCDEIPDGDVAVLNNHHSEVFMCAWNPKYDLLASGSGDSTARIWQISPKLRGSKVAEEASRTSMVLKHSKEVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGDVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVIGEEYPRQTFTGHCDEVNAIKWDPSGTFLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSTVCVMDWRM 614          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A835YN21_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN21_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 7.910e-133
Identity = 344/599 (57.43%), Postives = 381/599 (63.61%), Query Frame = 0
Query:   11 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            +SSEE+N LV+RYLQESGF HSAFTFAYES + KS+V       V  G LIT++QKGLAY  IE+HL++DG+E  CD D+SLL  H                                 PXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                         XXXXX             AR   ++   DVA+LT+H SEVFMCAWNP +DLLASGSGDSTARIW + P   G++ AE     S VLKHS EVGDKNKDVTTLEWNREG LLATGSYDGVARIWS++G+L H LEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVA G VQQ+F FHEAPTLDVDWKD++TFATCSTDKAI+   VGE +P+QTFTGH DEVNAIKWDP+G LLAS                                      K++LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG+YL SGSFAGHLY+W V DG LVKSYQGEGDIFEVAWN REDR+AACFSTS VAV+D R+
Sbjct:    3 VSSEEINILVYRYLQESGFVHSAFTFAYESLVAKSAVDPRD---VPTGALITYIQKGLAYSTIEDHLDDDGTERMCDEDYSLLTKHPAA------------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------XXXXXXXXXXXXXXXXXXARLDTDVAPEDVALLTSHSSEVFMCAWNPAHDLLASGSGDSTARIWRMPPVGSGARGAE----GSVVLKHSAEVGDKNKDVTTLEWNREGALLATGSYDGVARIWSKEGSLLHMLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVAAGRVQQRFEFHEAPTLDVDWKDNVTFATCSTDKAINILAVGEAFPKQTFTGHTDEVNAIKWDPTGRLLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGKRMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEYLASGSFAGHLYVWRVADGALVKSYQGEGDIFEVAWNHREDRVAACFSTSTVAVVDLRL 494          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A7S2CU47_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CU47_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 5.050e-126
Identity = 253/619 (40.87%), Postives = 319/619 (51.53%), Query Frame = 0
Query:   11 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGG---KGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAE--EASRTSRVLKHSREVGDKN--KDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVV--GEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACF-----STSMVAVMDFRM 609
            I+SEE+N+LV+RYLQESGF HSAFTFAYE+ I+KS++A  Q + V PG LI FLQKGL  V +E H+NEDGSE  CD + SLL  HVC   +N     K  +        E  Q+G  E                                +R + GGG  + G+                       GD    EV    GE                            R    G     A    E  + +V+VL++H SEVF C+WNP  DLLA+GSGD+TARIW++     G   A+  E    S          DK   +DVTTLEW+R G LLATG  DG+ARIWS++G LQHTL AHE  IFS        XXXX          DVA G+ + +F  H A  LDVDWKD  TFA+CSTDK I  C +   ++ P QTF GH DEVNAIKWDPSG++LASCSDD +AK+W +G+ + +H+L EH KEIYTI+WSP       P KKL+                                       GDY+ SGS  G LY+WS++DG++V+S++G  DIFEVAWN R DRIAAC      S++ V ++DFRM
Sbjct:    4 ITSEEINYLVYRYLQESGFVHSAFTFAYEALISKSTIAH-QGAEVPPGALIAFLQKGLQLVSLEHHINEDGSERACDEEMSLLTPHVCHTLANQKNLVKKTEVASHLHTSENSQQGNGEH------------MDTDEHERHPEKQSGRQSFSRNSGGGGNNNTGE-----------------------GDRPVFEV----GE--------------------------SMRQKTSGRM---ALAHSEFSKSEVSVLSSHSSEVFCCSWNPTNDLLATGSGDATARIWNLQAGEPGGGNAQSLELVHQSPARSPYATAADKQLERDVTTLEWSRNGELLATGGMDGIARIWSKEGGLQHTLNAHEESIFSLHFNYTGDXXXXGSYDNSTIAWDVATGQPKHRFEVHSAQVLDVDWKDGKTFASCSTDKTIKICTMDGSDKQPVQTFLGHKDEVNAIKWDPSGNILASCSDDTSAKLWTLGEPNHLHDLREHSKEIYTIRWSPTGLGSQNPNKKLVLASASFDSMVKLWDVERGCCTHSLNRHDKKVYTVAFSPCGDYIASGSLGGQLYVWSIRDGSIVRSFRGGSDIFEVAWNSRGDRIAACGGYESGSSNAVTIIDFRM 553          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: L8HHW9_ACACA (Transducin (Beta) family 1X-linked, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHW9_ACACA)

HSP 1 Score: 365 bits (937), Expect = 4.100e-117
Identity = 240/609 (39.41%), Postives = 293/609 (48.11%), Query Frame = 0
Query:   10 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWN---REGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            AI+SEEVN LV+RYL ESGF+HSAFTFA ESQ+++S++A      V  G LI+FLQ+GL Y  +E H+NE+G E +CD  F+L   HVC ++    K KD                E+E P                             R  N                                             +E G  A   QE                              E  EIP+  V  L  H SEVF+C+W+P   LLASGSGDSTARIW I P   G  +  E      VL+H  +  + +KDVTTL+WN    EG LLATGSYDG+ARIWS+ G L++TL  H+GPIFS                      D   GEV+QQF FH APTLDVDWK D  FATCSTDK I+                 DEVNAIKWDPSG+LLASCSDD+TAKIW + Q  CVH+ EEH KEIYTIKWSP       P + L+                                      SG+YL SG     L+IWSV+DG+LV++Y+G G IFEV WN   D++AACFS + V V+D RM
Sbjct:    2 AITSEEVNLLVYRYLLESGFSHSAFTFASESQVSRSNLATTD---VPTGSLISFLQRGLQYKQLETHINEEGIEVQCDAPFTLTGHHVCNIRGTV-KEKDTD-------------KEKEEPLYEM-------------------------RDAN---------------------------------------------QEGGGPAPMEQEEV----------------------------EAREIPDDQVTKLEGHTSEVFICSWSPTGPLLASGSGDSTARIWRIPPGPCGKSMVVEPP---IVLRHFNKDQESSKDVTTLDWNVRGSEGALLATGSYDGLARIWSETGQLKNTLNRHKGPIFSLKWNKSGNYLLSGSVDKTAIIWDAKTGEVKQQFEFHSAPTLDVDWKSDTCFATCSTDKMIY-----------------DEVNAIKWDPSGTLLASCSDDFTAKIWSLKQERCVHDFEEHQKEIYTIKWSPTGVGSPNPNRALVLASASFDAMIKLWDADRGVCFP----------------SGEYLASGXXXRCLHIWSVRDGSLVRTYRGNGGIFEVCWNKDGDKVAACFSNNTVCVIDVRM 459          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: I1K293_SOYBN (LisH domain-containing protein n=20 Tax=Phaseoleae TaxID=163735 RepID=I1K293_SOYBN)

HSP 1 Score: 342 bits (878), Expect = 3.370e-106
Identity = 202/365 (55.34%), Postives = 242/365 (66.30%), Query Frame = 0
Query:  252 CGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            CG IP  DV +L  H SEV  CAW+P   LLASGSGDSTARIW+I+   R    +E       VLKH R +  +K+KDVTTL+WN EGTLLATGSYDG ARIW+ +G L+ TL  H+GPIFSXXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  PTLDVDW+++++FAT STD  IH C +GE +P +TFTGH  EVN +KWDP+GSLLASCSDD TAKIW M Q + +H+L EH KEIYTI+WSP       P  KL+                                      +GDYLVSGS    ++IWS++DG +VK+Y G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:  262 CG-IPSSDVTILEGHTSEVCACAWSPTGSLLASGSGDSTARIWTIAEG-RCKPGSENGPLNVLVLKHVRGKTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWTTNGELKSTLSKHKGPIFSXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIHVCKIGETHPIKTFTGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYSLDGHRHPVYSVAFSPNGDYLVSGSLDRSMHIWSLRDGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 624          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A2R6S1C7_ACTCC (F-box-like/WD repeat-containing protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6S1C7_ACTCC)

HSP 1 Score: 337 bits (864), Expect = 6.400e-105
Identity = 275/616 (44.64%), Postives = 338/616 (54.87%), Query Frame = 0
Query:   10 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKG---------GARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            +I+S E+N+LVFRYL ESGF HSAF   YE+ I KSS+     +LV PG LITF+QKGL Y+ +E +L+   SE+  D DFS L       K                  L++   ER+   XXXXXXXXXXXXXXXXXXXXXXXXXX                                            E D    ++         E+                R  + G+  G          A +  EIP  D+ VL  H SEV  CAW+P   +LASGSGDSTARIW+I+     S      S    VLKH + +  +KNKDVTTL+WN +GTLLATGSYDG ARIWS +G L+  L  H+GPI  XXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  P LDVDW+++++FAT S+D  I+ C VGE +P + F+GH  EVN +KWDP+GSLLASCSDD TAKIW M Q   VH+L EH KEIYTI+WSP       P K+LL                                      +G+YLVSGS    ++IWS+KD  +VK+Y G G IFEV WN   ++IAA F+ + V V+DFRM
Sbjct:    3 SITSVELNYLVFRYLHESGFTHSAFALGYEAGINKSSI---DGNLVPPGALITFVQKGLQYIEMEANLSN--SETDMDEDFSFLHPSDLITKDV--------------YELRQIIKERKKNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXTEKDKVREKQH--------EDQTDREMVTDEAYKVKVRHDENGIHGGTEPMDISTNSASQTCEIPNSDIIVLEGHTSEVCACAWSPAGSILASGSGDSTARIWTIADATSRSSFQNGHSSVI-VLKHVKGKANEKNKDVTTLDWNVDGTLLATGSYDGQARIWSTNGELKSILNKHKGPIXXXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHSGPVLDVDWRNNVSFATSSSDNMIYVCKVGETHPIKFFSGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVHDLREHAKEIYTIRWSPTGPGTNNPNKQLLLASASFDATVKLWDVEQGRLTCSLNGHRDPVYSVAFSPNGEYLVSGSLDKSMHIWSLKDRKIVKTYTGSGGIFEVCWNKEGNKIAASFADNTVCVLDFRM 558          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A1Q3ASZ6_CEPFO (WD40 domain-containing protein/LisH domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3ASZ6_CEPFO)

HSP 1 Score: 334 bits (857), Expect = 7.860e-104
Identity = 268/626 (42.81%), Postives = 329/626 (52.56%), Query Frame = 0
Query:   11 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSL-------------LKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEV-------DTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            I+S E+N+LVFRYLQESGF HSAF   YE+ I K ++     ++V PG LITF+QKGL Y+ +E +L+    ++  D DFS              L+  +   K N  K +D+    +          E EG           XXXXXXXXXXXX XXXX                                       D +  E+       DT + EE  S  G                   M     E      ++ C EIP  DV VL  H SEV  CAW+P   LLASGSGDSTARIW+I+     S  A+       VLKH +    +K+KDVTTL+WN EGTLLATGSYDG ARIW+  G L+ TL  H+GPI  XXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  PTLDVDW+++++FAT STD  I+ C VGE  P +TF GH  EVN +KWDP+GSLLASCSDD TAKIW M Q   VH+L EH KEIYTI+WSP       P ++L+                                      +G+YLVSGS          K+G + K++ G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:    4 ITSVELNYLVFRYLQESGFTHSAFALGYEACINKCTI---DGNVVPPGALITFVQKGLQYLEMEANLSNVDGDADVDEDFSFVQPLDLITKDVHELRQMIKEKKKNLQKERDKDKELI---------QELEGERGRVREKERLXXXXXXXXXXXXIXXXXXXX--------------------------------XQQEDQVDREIITDQEDKDTVKHEENESFGG----------------PEPM-----EIATPSTSQTC-EIPSSDVTVLAGHTSEVCACAWSPTGSLLASGSGDSTARIWTIADGTSRSG-AQNGPSNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWTTTGELRSTLNKHKGPIXXXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKVGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWSMKQDKYVHDLREHAKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLLYSLNGHRDPVYSVAFSPNGEYLVSGSLDXXXXXXXXKEGKIAKTFTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 562          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A328E6R8_9ASTE (LisH domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E6R8_9ASTE)

HSP 1 Score: 328 bits (840), Expect = 3.670e-101
Identity = 271/620 (43.71%), Postives = 339/620 (54.68%), Query Frame = 0
Query:   10 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGG-------------KGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIY------TIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            +++SE++N+L+FRYL ESGF H+AF   YE+ I KS++     +LV PG L+ F+QKG+ Y+ +E +L+ D ++   D DF LL+      K                 KGK RG          +G       XXXXXXXXXXXXXXXXXXXXXXXXXXX                                       D +    D  E ++    +    E               +            A  C EI   DV VL  H SEVF CAW+P   LLASGSGDSTARIW+I      S++  E +    VLKH +    +K+KDVTTL+WN +GTLLATGSYDG ARIWS++G L  TL  H+GPIF XXXXXXXXXXXXXXXXXXXXXXD+  GE +QQF FH APTLDVDW+++ TFATCSTD  I+ C VG+  P +TF+GH  EVNAIKWDPSGSLLASCSDD TAKIW   Q +CVH+L+E            T   +  P K+L+                                      +G+YL SGS    L IWSVK+  +VK+Y G G IFEV W+   +++AACFS ++V V+DFRM
Sbjct:    3 SLTSEDLNYLIFRYLHESGFTHTAFALGYEAGIHKSTI---DGNLVPPGALVKFVQKGIQYLELEANLSNDDAD--LDEDFQLLQPLDLITKDVSELQKIIKEKKEVLHKGKSRG--------KDKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------XXXXXXKDRVKPHEDLVEAKQISDKSTLRHEENETNETAREPEPMEI-------CTSLTALSC-EIASSDVMVLEGHTSEVFACAWSPTCSLLASGSGDSTARIWTIVDGPCSSRMQSEPNAV--VLKHFKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSKNGELMSTLNKHKGPIFXXXXXXXXXXXXXXXXXXXXXXXDIKAGEWKQQFEFHSAPTLDVDWRNNTTFATCSTDNMIYVCKVGDSRPFKTFSGHQGEVNAIKWDPSGSLLASCSDDSTAKIWSSKQDTCVHDLKEXXXXXXXXXXXXTGPGTSNPNKQLMLASASFDSTIKLWDVELGRAVHSLNGHREPVYSVAFSPNGEYLASGSLDKCLIIWSVKEAKIVKTYSGNGGIFEVCWDKDGNKVAACFSDNVVCVLDFRM 573          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A2N9FDX2_FAGSY (LisH domain-containing protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A2N9FDX2_FAGSY)

HSP 1 Score: 327 bits (838), Expect = 6.500e-101
Identity = 273/616 (44.32%), Postives = 337/616 (54.71%), Query Frame = 0
Query:   10 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKG---------GARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKW------SPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 609
            +I+S E+N+LVFRYLQESGF HSAF   YE+ I KS++     +LV PG L+TF+QKGL Y+ +E +L+   S++  D DFS L+      K                E  Q    +R+     XXXXXXXXXXXXXXXXXXXXXXXX  R              H                          E    +  +R + A   QE+                   D G+F G            +  EIP  DV +L  H SEV  CAW+P   LLASGSGDSTARIW+I+     S+          VLKH +    +K+KDVTTL+WN EGT LATGSYDG ARIWS +G L+ TL  H+GPIFSXXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  PTLDVDW+++++FAT STD  I  C +GE  P +TF GH  EVN +KWDP+GSLLASCSDD TAKIW M Q   VH+L+EH KEIY          +  P ++LL                                      +G+YL SGS    ++IWS+K+  +VK+Y G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:    3 SITSVELNYLVFRYLQESGFTHSAFALGYEASINKSTI---DGNLVPPGALVTFVQKGLQYLEMEANLSN--SDTVLDEDFSFLQPLDLITKDVY-------------ELRQIINEKRKNLQKDXXXXXXXXXXXXXXXXXXXXXXXXXER--------------HEXXXXXXXXXXXXXXXXXXXXXXXXXEKQHVDHTDRETVAD--QEDKDNVKPE------------DNGVFGGPEPMDISTTSTSQACEIPSSDVIILEGHTSEVCACAWSPTGSLLASGSGDSTARIWTIADG--SSRSGSNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTQLATGSYDGQARIWSTNGELKTTLSKHKGPIFSXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIFVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKFVHDLKEHAKEIYXXXXXXXGPGTSNPNQQLLLASASFDSTVKLWDVELGKLLNSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKECKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 570          
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A2V3IXR2_9FLOR (F-box-like/WD repeat-containing protein TBL1XR1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXR2_9FLOR)

HSP 1 Score: 325 bits (833), Expect = 7.950e-101
Identity = 267/608 (43.91%), Postives = 335/608 (55.10%), Query Frame = 0
Query:   11 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVD--FSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRG-SKVAEEASRTSRVLKHSRE-------VGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFR 608
            +SS+E+N+LVFRYLQESG+ HSAF F YESQ+ K+ +     S + PG L++F+Q+G+ +V IEE L E+  +    +D   SLL  H C    +                                                      +  GTN                                 D   MEVD  E                             S D  +   K       ++P+ DV  L  H SEVF+CAWNP+  +LA+GSGDSTARIW I       S  +  A+    VL H+ E          K+ DVTTL+WN  GTLLATGSYDGVA++W++ G L+ +L  H      XXXXXXXXXXXXXXXXXXXXXX+   G++ +QF  HEAP LDVDWKDD+TFA+CSTDK I+   +    P + + GH DE+N I++DPSG LLASCSDDYTAKIW       + NL EH +E+YT+KW P   ++L+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G +LVSGSF     IWS KDG+LVK + G+G IFEVAWN   D++AACFS++ V V+D R
Sbjct:   11 VSSDEINYLVFRYLQESGYVHSAFAFGYESQVIKTKI---DGSQIPPGALLSFVQRGINFVEIEESLMEESKDGTHAMDGVTSLLDVHRCLCNQD---------------------------------------------FKTSRQNLNVINGTN---------------------------------DPPLMEVDEKE--------------------------PGTSMDKPKEKKKSNV----DVPDSDVLTLRGHTSEVFVCAWNPRTSVLATGSGDSTARIWPIPTTFPAPSSASAAAAAQPLVLPHTTERPRSTTLTKHKSNDVTTLDWNPTGTLLATGSYDGVAKVWTETGDLKFSLVHHSXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLSGQLVRQFTMHEAPCLDVDWKDDVTFASCSTDKLIYMHNLESNVPIRAYRGHEDEINCIRFDPSGMLLASCSDDYTAKIWSTKSNKMLFNLAEHTREVYTMKWCPSANRRLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPDGQFLVSGSFDRSFCIWSAKDGSLVKRFAGDGGIFEVAWNPVGDKVAACFSSNTVCVVDLR 507          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM70_ECTSI2.000e-25479.38LisH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YN21_9STRA7.910e-13357.43WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2CU47_9STRA5.050e-12640.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
L8HHW9_ACACA4.100e-11739.41Transducin (Beta) family 1X-linked, putative n=1 T... [more]
I1K293_SOYBN3.370e-10655.34LisH domain-containing protein n=20 Tax=Phaseoleae... [more]
A0A2R6S1C7_ACTCC6.400e-10544.64F-box-like/WD repeat-containing protein n=1 Tax=Ac... [more]
A0A1Q3ASZ6_CEPFO7.860e-10442.81WD40 domain-containing protein/LisH domain-contain... [more]
A0A328E6R8_9ASTE3.670e-10143.71LisH domain-containing protein n=3 Tax=Cuscuta sec... [more]
A0A2N9FDX2_FAGSY6.500e-10144.32LisH domain-containing protein n=4 Tax=Fagaceae Ta... [more]
A0A2V3IXR2_9FLOR7.950e-10143.91F-box-like/WD repeat-containing protein TBL1XR1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 282..296
score: 39.45
coord: 510..524
score: 41.13
coord: 382..396
score: 37.18
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 481..523
e-value: 7.6E-7
score: 38.8
coord: 526..565
e-value: 7.3E-10
score: 48.8
coord: 356..395
e-value: 8.3E-10
score: 48.6
coord: 256..295
e-value: 1.5E-6
score: 37.8
coord: 568..606
e-value: 47.0
score: 6.4
coord: 439..478
e-value: 2.5E-9
score: 47.0
coord: 398..436
e-value: 7.5
score: 11.5
coord: 309..354
e-value: 6.3E-5
score: 32.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 327..354
e-value: 3.1E-4
score: 21.5
coord: 442..478
e-value: 7.3E-9
score: 36.1
coord: 358..395
e-value: 1.8E-6
score: 28.6
coord: 262..295
e-value: 7.6E-4
score: 20.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 363..404
score: 15.321
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 322..354
score: 11.11
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 446..487
score: 14.686
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 533..574
score: 14.853
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 263..297
score: 12.981
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 488..532
score: 13.717
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 12..44
e-value: 1.2E-5
score: 34.8
IPR006594LIS1 homology motifPFAMPF08513LisHcoord: 14..40
e-value: 3.1E-7
score: 30.1
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 12..44
score: 10.41
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 252..609
e-value: 1.0E-133
score: 447.5
IPR013979Translation initiation factor, beta propellor-like domainPFAMPF08662eIF2Acoord: 480..587
e-value: 4.2E-6
score: 26.8
NoneNo IPR availableGENE3D1.20.960.30coord: 9..98
e-value: 1.7E-26
score: 94.0
NoneNo IPR availablePANTHERPTHR22846WD40 REPEAT PROTEINcoord: 11..606
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 382..396
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 510..524
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 263..574
score: 52.914
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 260..606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:123187..133646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16335.1mRNA_C-linearis_contig88.16335.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 122359..133675 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16335.1 ID=prot_C-linearis_contig88.16335.1|Name=mRNA_C-linearis_contig88.16335.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=610bp
MKPWKENGAAISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEA
QASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGV
KSNGGKGKDRGGGAVGGEGLQRGGSEREGPGSGSGSGRDNPKENSNSNDD
DDDHDADLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMA
MEVDTAEGEERGSAAGFGQENGGQAGAAANGEGGGMSRDGDEGLFKGGAR
ECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKL
RGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWNREGTLLATGSYDGVA
RIWSQDGALQHTLEAHEGPIFSLKWNDKGNFLLSGSSDKSAIVWDVARGE
VQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHM
DEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKW
SPRPEKKLLLASASFDATVKLWDVHAGKVVSTLQRHQDPVYSVAFSPSGD
YLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTS
MVAVMDFRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR006594LisH
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013979TIF_beta_prop-like
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf