mRNA_C-linearis_contig88.16335.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig88.16335.1
Unique NamemRNA_C-linearis_contig88.16335.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: D7FM70_ECTSI (LisH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM70_ECTSI)

HSP 1 Score: 721 bits (1860), Expect = 7.070e-250
Identity = 508/640 (79.38%), Postives = 520/640 (81.25%), Query Frame = 3 
Query:   30 MKPWKENGAAISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVG-----------------------GEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLF--------KGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            MKPWKENG AISSEEVNFLV+RYLQESGFAHSAFTFAYESQITKSSVAEAQ   VAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGV+ N       GGG                          GEG  RGG E    XXXXXXXXXXXXXXXXXXXXXXXXXXX                                    + G+AM  EVDT  GEERG    +G+  XXXXXXXXXXXXXX      EG          KGG   C EIP+GDVAVL NHHSEVFMCAWNPKYDLLASGSGDSTARIW ISPKLRGSKVAEEASRTS VLKHS+EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARG+VQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCV+GEEYPRQTFTGH DEVNAIKWDPSG+ LASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTS V VMD+RM
Sbjct:    1 MKPWKENGTAISSEEVNFLVYRYLQESGFAHSAFTFAYESQITKSSVAEAQ---VAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVRRN----AVEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXGEGFHRGGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXMANTGEAM--EVDT--GEERG----YGEXXXXXXXXXXXXXXXXXXXANGEGAMGISIGDGLKGGPAGCDEIPDGDVAVLNNHHSEVFMCAWNPKYDLLASGSGDSTARIWQISPKLRGSKVAEEASRTSMVLKHSKEVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGDVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVIGEEYPRQTFTGHCDEVNAIKWDPSGTFLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSTVCVMDWRM 614
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A835YN21_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN21_9STRA)

HSP 1 Score: 406 bits (1044), Expect = 3.710e-129
Identity = 344/599 (57.43%), Postives = 381/599 (63.61%), Query Frame = 3 
Query:   60 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            +SSEE+N LV+RYLQESGF HSAFTFAYES + KS+V       V  G LIT++QKGLAY  IE+HL++DG+E  CD D+SLL  H                                 PXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                         XXXXX             AR   ++   DVA+LT+H SEVFMCAWNP +DLLASGSGDSTARIW + P   G++ AE     S VLKHS EVGDKNKDVTTLEWNREG LLATGSYDGVARIWS++G+L H LEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVA G VQQ+F FHEAPTLDVDWKD++TFATCSTDKAI+   VGE +P+QTFTGH DEVNAIKWDP+G LLAS                                      K++LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG+YL SGSFAGHLY+W V DG LVKSYQGEGDIFEVAWN REDR+AACFSTS VAV+D R+
Sbjct:    3 VSSEEINILVYRYLQESGFVHSAFTFAYESLVAKSAVDPRD---VPTGALITYIQKGLAYSTIEDHLDDDGTERMCDEDYSLLTKHPAA------------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------XXXXXXXXXXXXXXXXXXARLDTDVAPEDVALLTSHSSEVFMCAWNPAHDLLASGSGDSTARIWRMPPVGSGARGAE----GSVVLKHSAEVGDKNKDVTTLEWNREGALLATGSYDGVARIWSKEGSLLHMLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVAAGRVQQRFEFHEAPTLDVDWKDNVTFATCSTDKAINILAVGEAFPKQTFTGHTDEVNAIKWDPTGRLLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGKRMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEYLASGSFAGHLYVWRVADGALVKSYQGEGDIFEVAWNHREDRVAACFSTSTVAVVDLRL 494
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A7S2CU47_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CU47_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 1.970e-122
Identity = 253/619 (40.87%), Postives = 319/619 (51.53%), Query Frame = 3 
Query:   60 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGG---KGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAE--EASRTSRVLKHSREVGDKN--KDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVV--GEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACF-----STSMVAVMDFRM 1856
            I+SEE+N+LV+RYLQESGF HSAFTFAYE+ I+KS++A  Q + V PG LI FLQKGL  V +E H+NEDGSE  CD + SLL  HVC   +N     K  +        E  Q+G  E                                +R + GGG  + G+                       GD    EV    GE                            R    G     A    E  + +V+VL++H SEVF C+WNP  DLLA+GSGD+TARIW++     G   A+  E    S          DK   +DVTTLEW+R G LLATG  DG+ARIWS++G LQHTL AHE  IFS        XXXX          DVA G+ + +F  H A  LDVDWKD  TFA+CSTDK I  C +   ++ P QTF GH DEVNAIKWDPSG++LASCSDD +AK+W +G+ + +H+L EH KEIYTI+WSP       P KKL+                                       GDY+ SGS  G LY+WS++DG++V+S++G  DIFEVAWN R DRIAAC      S++ V ++DFRM
Sbjct:    4 ITSEEINYLVYRYLQESGFVHSAFTFAYEALISKSTIAH-QGAEVPPGALIAFLQKGLQLVSLEHHINEDGSERACDEEMSLLTPHVCHTLANQKNLVKKTEVASHLHTSENSQQGNGEH------------MDTDEHERHPEKQSGRQSFSRNSGGGGNNNTGE-----------------------GDRPVFEV----GE--------------------------SMRQKTSGRM---ALAHSEFSKSEVSVLSSHSSEVFCCSWNPTNDLLATGSGDATARIWNLQAGEPGGGNAQSLELVHQSPARSPYATAADKQLERDVTTLEWSRNGELLATGGMDGIARIWSKEGGLQHTLNAHEESIFSLHFNYTGDXXXXGSYDNSTIAWDVATGQPKHRFEVHSAQVLDVDWKDGKTFASCSTDKTIKICTMDGSDKQPVQTFLGHKDEVNAIKWDPSGNILASCSDDTSAKLWTLGEPNHLHDLREHSKEIYTIRWSPTGLGSQNPNKKLVLASASFDSMVKLWDVERGCCTHSLNRHDKKVYTVAFSPCGDYIASGSLGGQLYVWSIRDGSIVRSFRGGSDIFEVAWNSRGDRIAACGGYESGSSNAVTIIDFRM 553
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: L8HHW9_ACACA (Transducin (Beta) family 1X-linked, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHW9_ACACA)

HSP 1 Score: 365 bits (936), Expect = 1.140e-113
Identity = 240/609 (39.41%), Postives = 293/609 (48.11%), Query Frame = 3 
Query:   57 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWN---REGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            AI+SEEVN LV+RYL ESGF+HSAFTFA ESQ+++S++A      V  G LI+FLQ+GL Y  +E H+NE+G E +CD  F+L   HVC ++    K KD                E+E P                             R  N                                             +E G  A   QE                              E  EIP+  V  L  H SEVF+C+W+P   LLASGSGDSTARIW I P   G  +  E      VL+H  +  + +KDVTTL+WN    EG LLATGSYDG+ARIWS+ G L++TL  H+GPIFS                      D   GEV+QQF FH APTLDVDWK D  FATCSTDK I+                 DEVNAIKWDPSG+LLASCSDD+TAKIW + Q  CVH+ EEH KEIYTIKWSP       P + L+                                      SG+YL SG     L+IWSV+DG+LV++Y+G G IFEV WN   D++AACFS + V V+D RM
Sbjct:    2 AITSEEVNLLVYRYLLESGFSHSAFTFASESQVSRSNLATTD---VPTGSLISFLQRGLQYKQLETHINEEGIEVQCDAPFTLTGHHVCNIRGTV-KEKDTD-------------KEKEEPLYEM-------------------------RDAN---------------------------------------------QEGGGPAPMEQEEV----------------------------EAREIPDDQVTKLEGHTSEVFICSWSPTGPLLASGSGDSTARIWRIPPGPCGKSMVVEPP---IVLRHFNKDQESSKDVTTLDWNVRGSEGALLATGSYDGLARIWSETGQLKNTLNRHKGPIFSLKWNKSGNYLLSGSVDKTAIIWDAKTGEVKQQFEFHSAPTLDVDWKSDTCFATCSTDKMIY-----------------DEVNAIKWDPSGTLLASCSDDFTAKIWSLKQERCVHDFEEHQKEIYTIKWSPTGVGSPNPNRALVLASASFDAMIKLWDADRGVCFP----------------SGEYLASGXXXRCLHIWSVRDGSLVRTYRGNGGIFEVCWNKDGDKVAACFSNNTVCVIDVRM 459
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: I1K293_SOYBN (LisH domain-containing protein n=20 Tax=Phaseoleae TaxID=163735 RepID=I1K293_SOYBN)

HSP 1 Score: 342 bits (876), Expect = 9.270e-103
Identity = 202/365 (55.34%), Postives = 242/365 (66.30%), Query Frame = 3 
Query:  783 CGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            CG IP  DV +L  H SEV  CAW+P   LLASGSGDSTARIW+I+   R    +E       VLKH R +  +K+KDVTTL+WN EGTLLATGSYDG ARIW+ +G L+ TL  H+GPIFSXXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  PTLDVDW+++++FAT STD  IH C +GE +P +TFTGH  EVN +KWDP+GSLLASCSDD TAKIW M Q + +H+L EH KEIYTI+WSP       P  KL+                                      +GDYLVSGS    ++IWS++DG +VK+Y G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:  262 CG-IPSSDVTILEGHTSEVCACAWSPTGSLLASGSGDSTARIWTIAEG-RCKPGSENGPLNVLVLKHVRGKTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWTTNGELKSTLSKHKGPIFSXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIHVCKIGETHPIKTFTGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYSLDGHRHPVYSVAFSPNGDYLVSGSLDRSMHIWSLRDGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 624
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A2R6S1C7_ACTCC (F-box-like/WD repeat-containing protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6S1C7_ACTCC)

HSP 1 Score: 337 bits (863), Expect = 1.150e-101
Identity = 275/616 (44.64%), Postives = 338/616 (54.87%), Query Frame = 3 
Query:   57 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKG---------GARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            +I+S E+N+LVFRYL ESGF HSAF   YE+ I KSS+     +LV PG LITF+QKGL Y+ +E +L+   SE+  D DFS L       K                  L++   ER+   XXXXXXXXXXXXXXXXXXXXXXXXXX                                            E D    ++         E+                R  + G+  G          A +  EIP  D+ VL  H SEV  CAW+P   +LASGSGDSTARIW+I+     S      S    VLKH + +  +KNKDVTTL+WN +GTLLATGSYDG ARIWS +G L+  L  H+GPI  XXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  P LDVDW+++++FAT S+D  I+ C VGE +P + F+GH  EVN +KWDP+GSLLASCSDD TAKIW M Q   VH+L EH KEIYTI+WSP       P K+LL                                      +G+YLVSGS    ++IWS+KD  +VK+Y G G IFEV WN   ++IAA F+ + V V+DFRM
Sbjct:    3 SITSVELNYLVFRYLHESGFTHSAFALGYEAGINKSSI---DGNLVPPGALITFVQKGLQYIEMEANLSN--SETDMDEDFSFLHPSDLITKDV--------------YELRQIIKERKKNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXTEKDKVREKQH--------EDQTDREMVTDEAYKVKVRHDENGIHGGTEPMDISTNSASQTCEIPNSDIIVLEGHTSEVCACAWSPAGSILASGSGDSTARIWTIADATSRSSFQNGHSSVI-VLKHVKGKANEKNKDVTTLDWNVDGTLLATGSYDGQARIWSTNGELKSILNKHKGPIXXXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHSGPVLDVDWRNNVSFATSSSDNMIYVCKVGETHPIKFFSGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVHDLREHAKEIYTIRWSPTGPGTNNPNKQLLLASASFDATVKLWDVEQGRLTCSLNGHRDPVYSVAFSPNGEYLVSGSLDKSMHIWSLKDRKIVKTYTGSGGIFEVCWNKEGNKIAASFADNTVCVLDFRM 558
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A1Q3ASZ6_CEPFO (WD40 domain-containing protein/LisH domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3ASZ6_CEPFO)

HSP 1 Score: 334 bits (856), Expect = 1.360e-100
Identity = 268/626 (42.81%), Postives = 329/626 (52.56%), Query Frame = 3 
Query:   60 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSL-------------LKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEV-------DTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            I+S E+N+LVFRYLQESGF HSAF   YE+ I K ++     ++V PG LITF+QKGL Y+ +E +L+    ++  D DFS              L+  +   K N  K +D+    +          E EG           XXXXXXXXXXXX XXXX                                       D +  E+       DT + EE  S  G                   M     E      ++ C EIP  DV VL  H SEV  CAW+P   LLASGSGDSTARIW+I+     S  A+       VLKH +    +K+KDVTTL+WN EGTLLATGSYDG ARIW+  G L+ TL  H+GPI  XXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  PTLDVDW+++++FAT STD  I+ C VGE  P +TF GH  EVN +KWDP+GSLLASCSDD TAKIW M Q   VH+L EH KEIYTI+WSP       P ++L+                                      +G+YLVSGS          K+G + K++ G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:    4 ITSVELNYLVFRYLQESGFTHSAFALGYEACINKCTI---DGNVVPPGALITFVQKGLQYLEMEANLSNVDGDADVDEDFSFVQPLDLITKDVHELRQMIKEKKKNLQKERDKDKELI---------QELEGERGRVREKERLXXXXXXXXXXXXIXXXXXXX--------------------------------XQQEDQVDREIITDQEDKDTVKHEENESFGG----------------PEPM-----EIATPSTSQTC-EIPSSDVTVLAGHTSEVCACAWSPTGSLLASGSGDSTARIWTIADGTSRSG-AQNGPSNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWTTTGELRSTLNKHKGPIXXXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIYVCKVGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWSMKQDKYVHDLREHAKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLLYSLNGHRDPVYSVAFSPNGEYLVSGSLDXXXXXXXXKEGKIAKTFTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 562
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A328E6R8_9ASTE (LisH domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E6R8_9ASTE)

HSP 1 Score: 327 bits (839), Expect = 5.660e-98
Identity = 271/620 (43.71%), Postives = 339/620 (54.68%), Query Frame = 3 
Query:   57 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGG-------------KGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIY------TIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            +++SE++N+L+FRYL ESGF H+AF   YE+ I KS++     +LV PG L+ F+QKG+ Y+ +E +L+ D ++   D DF LL+      K                 KGK RG          +G       XXXXXXXXXXXXXXXXXXXXXXXXXXX                                       D +    D  E ++    +    E               +            A  C EI   DV VL  H SEVF CAW+P   LLASGSGDSTARIW+I      S++  E +    VLKH +    +K+KDVTTL+WN +GTLLATGSYDG ARIWS++G L  TL  H+GPIF XXXXXXXXXXXXXXXXXXXXXXD+  GE +QQF FH APTLDVDW+++ TFATCSTD  I+ C VG+  P +TF+GH  EVNAIKWDPSGSLLASCSDD TAKIW   Q +CVH+L+E            T   +  P K+L+                                      +G+YL SGS    L IWSVK+  +VK+Y G G IFEV W+   +++AACFS ++V V+DFRM
Sbjct:    3 SLTSEDLNYLIFRYLHESGFTHTAFALGYEAGIHKSTI---DGNLVPPGALVKFVQKGIQYLELEANLSNDDAD--LDEDFQLLQPLDLITKDVSELQKIIKEKKEVLHKGKSRG--------KDKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------XXXXXXKDRVKPHEDLVEAKQISDKSTLRHEENETNETAREPEPMEI-------CTSLTALSC-EIASSDVMVLEGHTSEVFACAWSPTCSLLASGSGDSTARIWTIVDGPCSSRMQSEPNAV--VLKHFKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSKNGELMSTLNKHKGPIFXXXXXXXXXXXXXXXXXXXXXXXDIKAGEWKQQFEFHSAPTLDVDWRNNTTFATCSTDNMIYVCKVGDSRPFKTFSGHQGEVNAIKWDPSGSLLASCSDDSTAKIWSSKQDTCVHDLKEXXXXXXXXXXXXTGPGTSNPNKQLMLASASFDSTIKLWDVELGRAVHSLNGHREPVYSVAFSPNGEYLASGSLDKCLIIWSVKEAKIVKTYSGNGGIFEVCWDKDGNKVAACFSDNVVCVLDFRM 573
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BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A2N9FDX2_FAGSY (LisH domain-containing protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A2N9FDX2_FAGSY)

HSP 1 Score: 327 bits (837), Expect = 9.890e-98
Identity = 273/616 (44.32%), Postives = 337/616 (54.71%), Query Frame = 3 
Query:   57 AISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKG---------GARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRGSKVAEEASRTSRVLKHSR-EVGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKW------SPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFRM 1856
            +I+S E+N+LVFRYLQESGF HSAF   YE+ I KS++     +LV PG L+TF+QKGL Y+ +E +L+   S++  D DFS L+      K                E  Q    +R+     XXXXXXXXXXXXXXXXXXXXXXXX  R              H                          E    +  +R + A   QE+                   D G+F G            +  EIP  DV +L  H SEV  CAW+P   LLASGSGDSTARIW+I+     S+          VLKH +    +K+KDVTTL+WN EGT LATGSYDG ARIWS +G L+ TL  H+GPIFSXXXXXXXXXXXXXXXXXXXXXXDV   E +QQF FH  PTLDVDW+++++FAT STD  I  C +GE  P +TF GH  EVN +KWDP+GSLLASCSDD TAKIW M Q   VH+L+EH KEIY          +  P ++LL                                      +G+YL SGS    ++IWS+K+  +VK+Y G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:    3 SITSVELNYLVFRYLQESGFTHSAFALGYEASINKSTI---DGNLVPPGALVTFVQKGLQYLEMEANLSN--SDTVLDEDFSFLQPLDLITKDVY-------------ELRQIINEKRKNLQKDXXXXXXXXXXXXXXXXXXXXXXXXXER--------------HEXXXXXXXXXXXXXXXXXXXXXXXXXEKQHVDHTDRETVAD--QEDKDNVKPE------------DNGVFGGPEPMDISTTSTSQACEIPSSDVIILEGHTSEVCACAWSPTGSLLASGSGDSTARIWTIADG--SSRSGSNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTQLATGSYDGQARIWSTNGELKTTLSKHKGPIFSXXXXXXXXXXXXXXXXXXXXXXDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIFVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKFVHDLKEHAKEIYXXXXXXXGPGTSNPNQQLLLASASFDSTVKLWDVELGKLLNSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKECKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 570
[Close]
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Match: A0A2V3IXR2_9FLOR (F-box-like/WD repeat-containing protein TBL1XR1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXR2_9FLOR)

HSP 1 Score: 325 bits (832), Expect = 1.170e-97
Identity = 267/608 (43.91%), Postives = 335/608 (55.10%), Query Frame = 3 
Query:   60 ISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEAQASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVD--FSLLKAHVCGVKSNGGKGKDRGGGAVGGEGLQRGGSEREGPXXXXXXXXXXXXXXXXXXXXXXXXXXXLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMAMEVDTAEGEERGSAAGFGQENXXXXXXXXXXXXXXMSRDGDEGLFKGGARECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKLRG-SKVAEEASRTSRVLKHSRE-------VGDKNKDVTTLEWNREGTLLATGSYDGVARIWSQDGALQHTLEAHEGPIFSXXXXXXXXXXXXXXXXXXXXXXDVARGEVQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHMDEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSMVAVMDFR 1853
            +SS+E+N+LVFRYLQESG+ HSAF F YESQ+ K+ +     S + PG L++F+Q+G+ +V IEE L E+  +    +D   SLL  H C    +                                                      +  GTN                                 D   MEVD  E                             S D  +   K       ++P+ DV  L  H SEVF+CAWNP+  +LA+GSGDSTARIW I       S  +  A+    VL H+ E          K+ DVTTL+WN  GTLLATGSYDGVA++W++ G L+ +L  H      XXXXXXXXXXXXXXXXXXXXXX+   G++ +QF  HEAP LDVDWKDD+TFA+CSTDK I+   +    P + + GH DE+N I++DPSG LLASCSDDYTAKIW       + NL EH +E+YT+KW P   ++L+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G +LVSGSF     IWS KDG+LVK + G+G IFEVAWN   D++AACFS++ V V+D R
Sbjct:   11 VSSDEINYLVFRYLQESGYVHSAFAFGYESQVIKTKI---DGSQIPPGALLSFVQRGINFVEIEESLMEESKDGTHAMDGVTSLLDVHRCLCNQD---------------------------------------------FKTSRQNLNVINGTN---------------------------------DPPLMEVDEKE--------------------------PGTSMDKPKEKKKSNV----DVPDSDVLTLRGHTSEVFVCAWNPRTSVLATGSGDSTARIWPIPTTFPAPSSASAAAAAQPLVLPHTTERPRSTTLTKHKSNDVTTLDWNPTGTLLATGSYDGVAKVWTETGDLKFSLVHHSXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLSGQLVRQFTMHEAPCLDVDWKDDVTFASCSTDKLIYMHNLESNVPIRAYRGHEDEINCIRFDPSGMLLASCSDDYTAKIWSTKSNKMLFNLAEHTREVYTMKWCPSANRRLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPDGQFLVSGSFDRSFCIWSAKDGSLVKRFAGDGGIFEVAWNPVGDKVAACFSSNTVCVVDLR 507
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM70_ECTSI7.070e-25079.38LisH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YN21_9STRA3.710e-12957.43WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2CU47_9STRA1.970e-12240.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
L8HHW9_ACACA1.140e-11339.41Transducin (Beta) family 1X-linked, putative n=1 T... [more]
I1K293_SOYBN9.270e-10355.34LisH domain-containing protein n=20 Tax=Phaseoleae... [more]
A0A2R6S1C7_ACTCC1.150e-10144.64F-box-like/WD repeat-containing protein n=1 Tax=Ac... [more]
A0A1Q3ASZ6_CEPFO1.360e-10042.81WD40 domain-containing protein/LisH domain-contain... [more]
A0A328E6R8_9ASTE5.660e-9843.71LisH domain-containing protein n=3 Tax=Cuscuta sec... [more]
A0A2N9FDX2_FAGSY9.890e-9844.32LisH domain-containing protein n=4 Tax=Fagaceae Ta... [more]
A0A2V3IXR2_9FLOR1.170e-9743.91F-box-like/WD repeat-containing protein TBL1XR1 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:122359..133675 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score724.9
Seed ortholog evalue3e-206
Seed eggNOG ortholog2880.D7FM70
Preferred nameTBL1XR1
KEGG koko:K04508
KEGG Pathwayko04013,ko04310,map04013,map04310
Hectar predicted targeting categoryother localisation
GOsGO:0000118,GO:0000122,GO:0000151,GO:0001067,GO:0001654,GO:0001745,GO:0001932,GO:0001933,GO:0002009,GO:0002021,GO:0002165,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005819,GO:0005856,GO:0005874,GO:0005876,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006508,GO:0006511,GO:0006629,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007173,GO:0007219,GO:0007275,GO:0007399,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007600,GO:0007605,GO:0008013,GO:0008022,GO:0008134,GO:0008150,GO:0008152,GO:0008587,GO:0008593,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009409,GO:0009416,GO:0009605,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0014070,GO:0015630,GO:0016042,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0017053,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019904,GO:0019941,GO:0022008,GO:0022416,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030111,GO:0030154,GO:0030162,GO:0030163,GO:0030177,GO:0030182,GO:0031056,GO:0031058,GO:0031063,GO:0031065,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031401,GO:0031461,GO:0031647,GO:0031667,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0032991,GO:0033043,GO:0033044,GO:0033993,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035264,GO:0035295,GO:0035601,GO:0036211,GO:0038127,GO:0040007,GO:0040008,GO:0042058,GO:0042221,GO:0042325,GO:0042326,GO:0042393,GO:0042461,GO:0042592,GO:0042675,GO:0042676,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043412,GO:0043523,GO:0043524,GO:0043627,GO:0043632,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0045165,GO:0045444,GO:0045570,GO:0045572,GO:0045747,GO:0045892,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046328,GO:0046329,GO:0046530,GO:0046620,GO:0046622,GO:0047485,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048563,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048592,GO:0048638,GO:0048639,GO:0048666,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050821,GO:0050872,GO:0050877,GO:0050896,GO:0050954,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051603,GO:0051716,GO:0060249,GO:0060255,GO:0060429,GO:0060548,GO:0060562,GO:0060612,GO:0060613,GO:0060828,GO:0061448,GO:0065007,GO:0065008,GO:0070013,GO:0070050,GO:0070302,GO:0070303,GO:0070491,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0080134,GO:0080135,GO:0090207,GO:0090263,GO:0090311,GO:0090312,GO:0090596,GO:0097159,GO:0098732,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0104004,GO:0140110,GO:1901184,GO:1901214,GO:1901215,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902275,GO:1902494,GO:1902531,GO:1902532,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2001141,GO:2001252
EggNOG free text desc.transcription corepressor activity
EggNOG OGsCOG2319@1,KOG0273@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons16
Model size2687
Cds size1830
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16335.1prot_C-linearis_contig88.16335.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig88 123187..133646 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930677.3802898-UTR-C-linearis_contig88:122358..1231861622930677.3802898-UTR-C-linearis_contig88:122358..123186Chordaria linearis ClinC8C monoicousUTRC-linearis_contig88 122359..123186 -
1690881191.5418255-UTR-C-linearis_contig88:122358..1231861690881191.5418255-UTR-C-linearis_contig88:122358..123186Chordaria linearis ClinC8C monoicousUTRC-linearis_contig88 122359..123186 -
1622930677.6436896-UTR-C-linearis_contig88:133646..1336751622930677.6436896-UTR-C-linearis_contig88:133646..133675Chordaria linearis ClinC8C monoicousUTRC-linearis_contig88 133647..133675 -
1690881191.7887735-UTR-C-linearis_contig88:133646..1336751690881191.7887735-UTR-C-linearis_contig88:133646..133675Chordaria linearis ClinC8C monoicousUTRC-linearis_contig88 133647..133675 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930677.3914704-CDS-C-linearis_contig88:123186..1232881622930677.3914704-CDS-C-linearis_contig88:123186..123288Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 123187..123288 -
1690881191.5551155-CDS-C-linearis_contig88:123186..1232881690881191.5551155-CDS-C-linearis_contig88:123186..123288Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 123187..123288 -
1622930677.4022133-CDS-C-linearis_contig88:123643..1237261622930677.4022133-CDS-C-linearis_contig88:123643..123726Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 123644..123726 -
1690881191.566864-CDS-C-linearis_contig88:123643..1237261690881191.566864-CDS-C-linearis_contig88:123643..123726Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 123644..123726 -
1622930677.4141707-CDS-C-linearis_contig88:124168..1242781622930677.4141707-CDS-C-linearis_contig88:124168..124278Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 124169..124278 -
1690881191.5867212-CDS-C-linearis_contig88:124168..1242781690881191.5867212-CDS-C-linearis_contig88:124168..124278Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 124169..124278 -
1622930677.4298952-CDS-C-linearis_contig88:124819..1249291622930677.4298952-CDS-C-linearis_contig88:124819..124929Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 124820..124929 -
1690881191.60591-CDS-C-linearis_contig88:124819..1249291690881191.60591-CDS-C-linearis_contig88:124819..124929Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 124820..124929 -
1622930677.4451287-CDS-C-linearis_contig88:125387..1254701622930677.4451287-CDS-C-linearis_contig88:125387..125470Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 125388..125470 -
1690881191.6208248-CDS-C-linearis_contig88:125387..1254701690881191.6208248-CDS-C-linearis_contig88:125387..125470Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 125388..125470 -
1622930677.4616246-CDS-C-linearis_contig88:125898..1260011622930677.4616246-CDS-C-linearis_contig88:125898..126001Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 125899..126001 -
1690881191.6373289-CDS-C-linearis_contig88:125898..1260011690881191.6373289-CDS-C-linearis_contig88:125898..126001Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 125899..126001 -
1622930677.4789386-CDS-C-linearis_contig88:126367..1264721622930677.4789386-CDS-C-linearis_contig88:126367..126472Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 126368..126472 -
1690881191.646564-CDS-C-linearis_contig88:126367..1264721690881191.646564-CDS-C-linearis_contig88:126367..126472Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 126368..126472 -
1622930677.4957542-CDS-C-linearis_contig88:126815..1269191622930677.4957542-CDS-C-linearis_contig88:126815..126919Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 126816..126919 -
1690881191.6565087-CDS-C-linearis_contig88:126815..1269191690881191.6565087-CDS-C-linearis_contig88:126815..126919Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 126816..126919 -
1622930677.5124478-CDS-C-linearis_contig88:127431..1275591622930677.5124478-CDS-C-linearis_contig88:127431..127559Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 127432..127559 -
1690881191.6665926-CDS-C-linearis_contig88:127431..1275591690881191.6665926-CDS-C-linearis_contig88:127431..127559Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 127432..127559 -
1622930677.525473-CDS-C-linearis_contig88:128226..1282741622930677.525473-CDS-C-linearis_contig88:128226..128274Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 128227..128274 -
1690881191.677613-CDS-C-linearis_contig88:128226..1282741690881191.677613-CDS-C-linearis_contig88:128226..128274Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 128227..128274 -
1622930677.5380788-CDS-C-linearis_contig88:128830..1288771622930677.5380788-CDS-C-linearis_contig88:128830..128877Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 128831..128877 -
1690881191.6973557-CDS-C-linearis_contig88:128830..1288771690881191.6973557-CDS-C-linearis_contig88:128830..128877Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 128831..128877 -
1622930677.5577674-CDS-C-linearis_contig88:130464..1309281622930677.5577674-CDS-C-linearis_contig88:130464..130928Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 130465..130928 -
1690881191.7132282-CDS-C-linearis_contig88:130464..1309281690881191.7132282-CDS-C-linearis_contig88:130464..130928Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 130465..130928 -
1622930677.5743325-CDS-C-linearis_contig88:131476..1315821622930677.5743325-CDS-C-linearis_contig88:131476..131582Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 131477..131582 -
1690881191.7230043-CDS-C-linearis_contig88:131476..1315821690881191.7230043-CDS-C-linearis_contig88:131476..131582Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 131477..131582 -
1622930677.588691-CDS-C-linearis_contig88:132316..1323911622930677.588691-CDS-C-linearis_contig88:132316..132391Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 132317..132391 -
1690881191.737263-CDS-C-linearis_contig88:132316..1323911690881191.737263-CDS-C-linearis_contig88:132316..132391Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 132317..132391 -
1622930677.6092927-CDS-C-linearis_contig88:133154..1332341622930677.6092927-CDS-C-linearis_contig88:133154..133234Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 133155..133234 -
1690881191.7581813-CDS-C-linearis_contig88:133154..1332341690881191.7581813-CDS-C-linearis_contig88:133154..133234Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 133155..133234 -
1622930677.629003-CDS-C-linearis_contig88:133564..1336461622930677.629003-CDS-C-linearis_contig88:133564..133646Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 133565..133646 -
1690881191.7739825-CDS-C-linearis_contig88:133564..1336461690881191.7739825-CDS-C-linearis_contig88:133564..133646Chordaria linearis ClinC8C monoicousCDSC-linearis_contig88 133565..133646 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig88.16335.1

>prot_C-linearis_contig88.16335.1 ID=prot_C-linearis_contig88.16335.1|Name=mRNA_C-linearis_contig88.16335.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=610bp
MKPWKENGAAISSEEVNFLVFRYLQESGFAHSAFTFAYESQITKSSVAEA
QASLVAPGMLITFLQKGLAYVGIEEHLNEDGSESRCDVDFSLLKAHVCGV
KSNGGKGKDRGGGAVGGEGLQRGGSEREGPGSGSGSGRDNPKENSNSNDD
DDDHDADLARGTNGGGEADLGKGGHGHKGAAGFSGGAGGAHAVDNGDAMA
MEVDTAEGEERGSAAGFGQENGGQAGAAANGEGGGMSRDGDEGLFKGGAR
ECGEIPEGDVAVLTNHHSEVFMCAWNPKYDLLASGSGDSTARIWSISPKL
RGSKVAEEASRTSRVLKHSREVGDKNKDVTTLEWNREGTLLATGSYDGVA
RIWSQDGALQHTLEAHEGPIFSLKWNDKGNFLLSGSSDKSAIVWDVARGE
VQQQFRFHEAPTLDVDWKDDLTFATCSTDKAIHTCVVGEEYPRQTFTGHM
DEVNAIKWDPSGSLLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKW
SPRPEKKLLLASASFDATVKLWDVHAGKVVSTLQRHQDPVYSVAFSPSGD
YLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTS
MVAVMDFRM*
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mRNA from alignment at C-linearis_contig88:122359..133675-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig88.16335.1 ID=mRNA_C-linearis_contig88.16335.1|Name=mRNA_C-linearis_contig88.16335.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11317bp|location=Sequence derived from alignment at C-linearis_contig88:122359..133675- (Chordaria linearis ClinC8C monoicous)
AGCTCGCCTTGGTGTGTGCCGGGAGGCGTATGAAGCCGTGGAAAGAGAAT
GGAGCTGCCATCAGCAGCGAAGAGGTCAACTTCCTTGTGTTCCGCTATCT
TCAAGAGTCGGGTGAGATTCTGTTTTAGGTCGGTTCACCCCTGAACCCCG
GGTTTGCGAGGAAGGTAGGCGAGAGGAGGGGGGATGCGCGTAGTCGCTGT
ATCTTGACGCCAACAGCCTGCAAGCGCCTACGCTCAACACCTATTTCCCC
TGCTTGCCTGTCCAGCCCCTCGCATCTGTTTCATTTTCTTTTTTCGCTCT
TTGAAACCGTGTCGCGGGTGGGTCAAACAGCATCTCCAGATTTGGCAAGA
CACACCTACTACTGCTGTATGTACACAGAGACAAACCTAGCCACAACTCT
CTCGGATCGCCGCTGCCGCTGTTTCGATTCCTTGCGGGCAGGCTTCGCCC
ACTCCGCCTTCACGTTCGCCTACGAGAGCCAGATCACCAAGTCCAGCGTC
GCGGAAGCTCAGGCAAGTCTAGTGGAGCCAAGCAGGAGGGGTCCCATCTT
CACCCACACATAGACATCCTATACGGAAGATACCACATACCCCACGTTAG
ATAGCTTACCCCCCAAACAATCCAACACACAGCAGTAACGAAGAGCCTCG
GCTTGCTGATTTGGTGCCATTGATAGCCGACAGCGGCGAAGGAGTCTTAG
AGCGTGTGCAGCAGCCCCCCTAGGCTGACGTAGATCGCTGATGTGAAGAA
AAAAACGAATTTTGGGTGGGCAACGGCACCGGTTAGGCTACAGCACACCT
CAAGGCGATAACTTTAACTTTGCAAGTTGCAACGTATCCCTATTATAGCA
CGAAGCTCATTAAGGGTGTTGGGTGTTGTTGGTGGTTTTGGCGGGAAGGC
GTTCGTCACTCCTCACCCTTATCTCATCCTCATCCCTCCAAGAAGACTCT
GCGCGGCGCTCAATCTTGACCCCAATCCCAACAGATTGTCGACGGCTGTG
CAACGGGAGCTTTCTCTGGAGTTTAGTTTTGTAATTTTGTAATTTTTAAC
GAGGAGTGTGACGATCACGATGGCGTGCGGAAGTATGCTCTCTCTTTCTC
GTGCATGATGGGACTAACACCACGGTAGATACCGTATGGTCTCATGTCAT
GTCAAGTCATGTCGTGCCATGTCATGCACGCGTGTCCTGTCTCGTTGTGT
GTTGTGTCTTGGCTTGATATTATCTCATGCCATGTGTGTACAATACTGCG
TCTCTGGTGCCCTTGTGTGTCTTGGTTTGGTTAGGTGGCGCCGGGCATGC
TGATAACCTTCCTGCAGAAAGGCCTGGCCTACGTCGGCATCGAGGAGCAT
CTCAATGAGGTACCTACATGCAAAAGGCACCATCCTACTGCTGTGCATGT
GATATCAGGCTACTGCTGGTGTTGCTTTTGTTGCCGTACCTACGGCCATC
GATGCCATCGACGCCAATGTCCGTGATGGTTACATGGTGTGAAGAACTGC
AACCTTGTGTACAGTTTTTTTAATGTGCGTTCACCGCAGTGAGGTACATT
TACAACCATAAGCCTGCGCTGTGGGTCGATGTGAGGGCTAGGCCAGCAGG
ATTGAACAATCCTTAAGCCTGTGTGTTATGCAGGGTAGTACCTGTGTGTT
ATGTAGGGTATACCTGTCCGTCCTAGTGGACATTATTATCTTAATCTGTG
TCGCTGATAGATTCCCGTTGAGGCCCGTCCCGTTGAGGGCACCTGCCTAT
CGCTATGTATGCCCCGAAAAACTGAAGCTGGCACGCTGTGTCGCTGTTGC
TTCAATATCGAGCCTACGACACGACCGGTCGGCGGCGCTTTTATGGTATG
ATTGCATGACACACGAACCCCACCAAAGTATCCGTGTACCCCCCAGATCA
CCGTATATAATGTATTCACGTACCCCCCAGGTCACCGTATATAATGTATC
CACCTACCCCCCAAGGTCACCGTATCTAATGTATCCACGTACCCCCAGGT
CACCGTATCTAATGTATCCACGTACCCGCCAAGATCACCGTATCTAATAA
GTGTTTTGAATGATACTGCTGTCTGTGTACTAATTCCAAACAGGACGGTT
CGGAGTCTCGATGCGACGTTGACTTCTCGTTGTTAAAGGCGCACGTGTGC
GGCGTCAAGAGCAACGGCGGCAAGGGCAAGGACCGGGGGGGCGGCGCTGG
TGAGATGAGAGGATGAGATGATAGGGGGGCACGCGGGTTGTTACAATTTG
CGCCTTTTATTTGCCCGCAAACTAGCGTAACCCTAGCATAGTCGGAGGAG
GGGTATATGGTATAGCGTACTGTAGCTTGTACTTTGTTCGGGGGGGGCGG
CGGCGCTAACGAGTGGCATACTTTGGTGACGCGACACACACAAGCGACAC
ACAAAAGCGACAGCAGCCGTTTCCCGCAAGATTCATTGCAAGGGCTACTG
TAATACTCTGTAATACTGTAATACTATAATATCATAATATAATAGAGCGA
GGCGTGTGCCTCGACGAGGCCTTGTGTAGCAGTTGTGGTCCATTCTGAGT
ACGAACGATGGACTGGGTGTAGATGTGTTGCTGGCTCGACAGCAGTAACC
CCTCGCACACACATGTTGGATGTATCTACATGCATTCGTGTCAGGCTCGT
GCTGCTGTATCTGTCGCGCTCAGTCTCACGCTCCTATTTCCGACGTTTGG
TGCCACCGCACCCCACCACCACTACTACGCAACACTACACCCAAAAGTCG
GCGGCGAGGGGCTGCAAAGGGGCGGGAGCGAGCGAGAAGGGCCAGGCAGC
GGCAGCGGCAGCGGTCGGGATAACCCCAAAGAAAACTCCAACTCCAACGA
CGACGACGACGACCATGACGCCGATCTCGCGAGGGGCACAAACGGCGGCG
GCGAAGCCGATCTCGGCAAGGGCGGGCACGGGCACAAGGGCGCCGCTGGA
TTCTCCGGCGGTGCCGGCGGCGCACACGCGGTAGACAACGGGGATGCCAT
GGCGATGGAGGTTGACACCGCGGAGGGCGAAGAGAGGGGCAGTGCCGCGG
GCTTCGGGCAGGAGAATGGGGGTCAAGCGGGGGCGGCGGCGAACGGCGAG
GGTGGTGGCATGAGTAGAGATGGAGACGAGGGTCTTTTCAAGGGCGGGGC
GCGCGAATGCGGAGAGATCCCGGAGGGGGACGTGGCGGTGCTCACCAACC
ACCACTCGGAGGTAAGTTGAAGTTGAAGGTTTATACGGATACGGACTATA
TTAAGCGTCCACTTCGTATTATATTACAGTCAGGGAAAATATAACTTCCG
CAAGAGGTGCAAAAACGTGATCACGCGATGAAGTTAAACAAGTTTTGCGT
TTTGTACTATCCTGTATCGCTGTGCGTGTATTGTACAAACTAACTGCTGT
CTGTCGCGCTTCGCTCGATTTTCGATATTTTATTTTATTGGCAAGACATT
GAAGAAAAGGGCGACTTTCGGTAAGGTAGGTAAGGAAATAGACGAAATCC
AGTATAATAAGAACAAACACGGTGGCATCGTTGCTGCCGTCCAAACCGAA
GCCGCTATCCTCTTGGGGCGGCACCAGATGGCACACATTCTTTGTATTTT
CGCAAAACTCGAAGATTTGAGTTACAATATATAGACCTCCGTGGCACTAT
TTGGCACAGGAATTTTAAAACTCTGTAAGTGACTCTATTATTCTGTAAAG
TAACGCTGTATTTCCGTAACTCTGTTAACTCTGTTAACTCTGTTAACTCT
GTTAACTCTGTTAACCCTGTTAAAAACTCTGTCGAAACTTGGTGGTGTTG
CACTCCCCTTAACGCTCCCCTTAACGCGCGCCTTAACACTCCCCTCAAGG
CGGCCCATCGCACCATACTAAAATCAGTATGAGGCTTTTCGGAGCAAATA
ACATACCCCCGGCTGAACATCACGGAGCCTCACTTGAAATTAGTCCAGGA
GTTCCGATCGATATGGTCTTTCTTCGAAATTTCAGAGGAGGAGCTCGGAG
TTTTTTTCGGCGATTTACGGAGTTTTTCGACCAAATTGTAAAGTACCGCT
TGCGTGCTCGAAAATATTGTGCCGCCACCGCTGCTGTGCTATGAGGTTAG
TTATTCCGTTTCTCCCAAAACAGCCGGGCTACATTCGCGTCAAGTCCGTT
TTGTCACTGGGGCAAAAACCACGATGTGAGGCTCCGGGGCGTTGATCCAA
ACAATCACCCGAATTTCCCAAAAAAGCGACCGAAGAAAACATGACTCGTG
CTCACGAAAACCTTCACAGCGCGGCCTGTAGCTGTCTGCTGCTGCTGCTT
CCCAGGACATACGGCGGCTCCTACACACCATATCAGTAGCCCCTCCAAGC
GGCTTGAGCTATTTTTGCTTGTGGGGGGCGAGCTAGCTGATCTCCTGAAT
ACCAAACTGTCTCTGCAACGTTCGTTTGACAGACCTTTCGGAAGAGCGAT
TTTTGCACCTTTGGAGAGGAAAAGCTCCGCGTTCCCGACCGCTGCAAACT
ACGGCGGAAAGCAAATCTGCAGAGAATAGCAAACTCTTGAATCTGAATAA
CTAAGCTCATAGCACAGCCACAGCAGCAGCGGCGGCGGGCACAACGTGGA
AAGTCAAGGCCTTAGGGAGGCCCGTGCGGTGATTTTCACGTACCCCCAAA
ACAAACGACTCAAAAAAATAATCTGGCGTGCGTTTTCACTGAGCCCCCAA
ACACGGAGAAAACATGGGGCCACGTGCGATGGGCCGCCTTAACACTCCCC
TTAACACTCCCCTTAACGCCCCCCTTAACACTCCCCTGCACCTTGCAGGT
GTTTATGTGCGCATGGAACCCGAAGTATGATCTGCTGGCGTCAGGGTGAG
TCGGGGATCACGTGTAACTTTTCTAGCGTTGGGTCGTCGCATAGACTACA
TGTGTTGCACAGGATTCATTGTTTGGTTGCTGTTCCATCTTTCGAAGAGG
AAGAGCTGTAAGTGCACACCTCTATTTACCATATCTTTAACTCAATTTTA
AGCCCCTCGTGGGGTGTGTGTTCTACTGGACCTGTAGCGCCTGGTCTGCC
GGGCTTGTAGATAGCGATTTTCGATATTTTAGCCTCTACTTGGGGGAGGG
AAAGTGTTCGGATACTATGGCGTGAGAAGGCTAACTCTTTGCTTCTTTGA
TGTTTTGATGTTTTGATGTCTTGATGGCATGGCGCTGTCACTACTCTCTT
CAGGTCCGAGATGACAAACGTCCAGTGTATTGTATGGTACTCTGTTCGTT
TTATGTCAGTCTGATGTCATGTCTTTGCCGCTGCCTGTAACTGGCATGGG
ATTGCATGTCCTTCGTGCCTTGTCTTGATGTCTTGATGTCTTGATGTCTT
GATGTCTTGATATCTGTATGGCATGGCACTGCTGTCTTTCCATCTTTCCA
GCTCCGGAGACTCCACGGCGCGGATATGGTCAATATCACCCAAGCTGCGG
TAAGCGAAATAAATCAAATGTGTTTGACACGGCAGGGTTGTGCGGGGGGG
ACGGGGGGTTGAACTCTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTT
TGTTTGTTTGCTGTGCACACTCGACCGGAAGTGCATTTCAGTAGATGTGC
ATCGTATCAAACCACTGCTGTCTGTGTGGAATACGGTACCGCATTCATCT
CTGCGATTCAGTTACGTGGGGAGGTTCAGTCCTTAATTTATTTTGTTCTA
GTGACGGCTGAATGATCAAATGCAGAGGATGGTGGTGATGGTGCGCTGTA
CGGTGTGTGCTGCTCCGTACTGTACGTGATGGGGAATTATGCAATAACGT
CTGCTATGTTCTTGTTCGATTCGATTCGAATGGTTCGATTAGAGTGCGTG
TTCGAATGAAGCAAGTCAAGTCACGCATCAAAACAGCTCATCCCCAACCC
AAGAGCATCAATGGAATAAAGCAGTAAGTACAGTCACAGCCTATCCTGCT
CGGTTGCGTCGAGTGAACGCAAACCTGAAGTAAGAAGCACACGAGGGGCC
GAGAGGAGGAGAGCAGAGCAGAAAAGGGATATCTCATCTTATTCGCCTGC
TTTCGTTTTTTCCCAAAACTCAAAACTCCCCAATGCCTGCAACACGAAAC
ACGAAACATGAAACAGTGGTTCGAAGGTGGCAGAGGAGGCCTCGAGGACG
TCAAGGGTGCTGAAGCACTCTAGGGAGGTGGGAGACAAGAACAAGGACGT
GACCACGCTCGAGTGGAACAGAGAGGGCACGCTTTTGGCTACAGGTGGGT
TAAGGTACACCAACAATCGAGTCGGTACGGTACCACGGGTGTGTGTGTTT
TGGGCTCACCGATCCTAAGTTTTCTCTCTCCTACTTTCTCTCGGCTTCTT
CGATCTCCTGTCTGTATTTGTCGTCCCCGCGTCTCCCTATTCCCTGTTGT
AGACTACCTGTCTTAGTCTGCTTTTTTCTTTTTCCCGGTGCATGTTCTGT
CGTTTTCTTATCTTCTTATTTCTATTCGCTTTGCCCGCATCACTCTGTAA
TTAGCGGGTGACTATTGCTCTTTCGGTTTCCCATCTTGTCTTGCCTGTTG
CTGTTTATCTCCTTCCTTTGTCTCAATCTCGGGTCACGTTCCAAACCTTA
AAATACTCTTAAAATGTTCAAATGCTTGGGTATGTCCCTCTTGCACCTTT
CTGTGTGGTAATGCAAACTACCTTATTCTGGTGCCTCGATGCGGTCTGTT
CATATGTGCATTAATATGATGCCATGTGTTGATGTTGGTGTGTTTGTTGC
CTTCAGGGTCCTACGACGGGGTGGCGCGCATTTGGTCCCAGGACGGAGCG
CTGCAGCACACGCTCGAGGCGCACGAAGGCCCCATTTTCTCTCTCAAGTG
GAACGATAAGGTGATACGGAAATATGGTACGAAGTACAACATTACACACC
ACTTTGGCCGAGCGAGACAGAGACACTTGCAGTGCGTTTCTCTGGTGTGG
CCATGTCTACCATGCCTTACCATGCCGATGCACCATGTCGTGGAGTTACT
TACAGCACTTGAGGCTTTGCCGAAGGAGGACCGTTACCCGACACATTAGC
ATTCGGTCCGGTTCGTTACAAATTTGAAATTTGAAATTTCCAGTAGAATT
TACTCCCCAGAGGATTTCGAAACTCGGGCCTTTGCAGATTCCATTCGTTG
ACATGCCATTCGACTACGGTATGTTCGATTGGCCTGTACCTTTTTTATTT
CAGGGGAACTTCCTGCTGAGCGGTAGCTCTGACAAGTCGGCGATCGTGTG
GGACGTGGCGAGGGGAGAAGTCCAGCAGCAGTTCAGATTTCACGAGGCGC
CTACGCTGGTAAGTTCAAGTTGGCGTTTGGCATGATGACATGTCAATGTC
AACATGGCATGGCAGGATGTGGGTTGGATGCTCCCACCTGACCTCCGCGA
CCATGAGTTTTGGTGGTGACAATAGTGATGGTGATGTATATGTTGCTCCC
ACCATGATATCAACGACATAACATGGTCGTTGCGAGGATAACAAACGATA
CAAAGTGATGTACATACATATGTACAAGATGCAGCTTCGATGTATTTATG
TTCTGTACCAACATTCTGCCACCATTGTGCCAACATTCTGCTACCATTGT
ACCAACATTCTGCTGCCATTTTTCCAACTCTGCAACCATTGTACCGTATA
CTTGTAATGCCATCCACAAAACAGGACGTGGATTGGAAGGACGACCTGAC
GTTTGCGACGTGCTCGACGGACAAGGCCATACACACCTGCGTCGTCGGGG
AGGAGTACCCAAGACAGACCTTCACCGGTACGTGATACTTGTACTTGCAC
GCATCATATCGTATGTGGTGGTATACCTGGTGTATATCTATCATGCGTTT
ACCGTACTTCTATACACTTGGAATGTATGTGTGTATTGTACCTATAGGAT
AGGATAGCTGAGACAGACCTTCACTTGACCGGTGCCTTTGGGTGCCTTTG
GGTGCGTTTGCGCTTTTGTGTGTGAACTGCTGTATGCACTGGTGTGCGGT
GCTTCCTATGATACCCTAGCCCAAGCGCTCCTCGTGAAGCTGCTGTATGA
TGCTGTATGATGCATCCTCCGCGTTTAATGTACACGCAAATCATGAGTTT
GGTATCTTGGTGTTGCCTACCTCGTTGGGTGCGATGTAGTGTGTTCACCA
GAGTGGTATGGAGTGGTATGGAGTGGTGTTTGATTCGTTCGATTGAATGC
GGCAGGACACATGGACGAGGTGAACGCGATCAAGTGGGACCCTAGCGGCA
GCTTGCTGGCCAGCTGTTCCGACGACTACACAGCCAAGGTGAGGCAAGCT
CAAGGCGGCAGTGGTGACGTCAGTGGTGACGTTGATGTCTGTTGACAAGC
TGCGCCGGGACCTAAAATGTTTTCATCGTCGTTTCAAACCATTTTCTTTG
CGTGTTAAATGTTAATGTTAAATGTTAATGTTAAATGTTACTGTTACTGT
TACTACTGCTGTTGATGTTAATGTTAAGTGCTGATGTTATTTATTTATTT
TTCGAGTTTCACGTTCATGTGATTTGTGATTTGTGTTGAGGATACTTGAA
TTAGTCAGGAAATCAAGACGCAGCTTACCTCCCCGCATTAGGCACGAAAG
TCTACCTGCGGACGTATGCTTGTTCCTATCGTATGATGATGTATCTGTTG
CTGGTTCGGTTCAACCGAGTCATTTGCTTGGTTTGGGCTGCAACTTGTGT
CCTCCTCCTCTCCTCTCGCAATATGCAAAATGGGTTTGTGTGGCAGATCT
GGAAGATGGGGCAGACGTCGTGCGTCCACAACCTGGAGGAGCACGACAAG
GAGATCTACACCATCAAGTGGAGTCCAAGGCCAGAGAAGAAGCTACTGTT
GGCCAGGTACGGTACTTCGTAGTACGGCGCTGTGCATACCGCTGCACGAT
CGTGTAGTAATTGTATTTGTAGAGTGTGGAGAGAGAGAGAGAGAGAGAGA
GAGAAAGTTACCGCAACGACGTGCAGGGTTAGGGTTAGGCTTCGGCTTGC
ACCTCACGTCGCCCCCCCCCCCCGGCCCTCCTTTTGTTGCCCATCTCGAA
GAGTATATTCTCGATTTTTGAAAATGTGAATTCGTCGGTGGTATACGAAG
AAAAACGCCCCATTTTACCCCCTCCTGTGTGACCCCGGTTGGTTCTAGTT
GAACAGAAAAATACACTGAACAAGTGTAGTACTCTAAATACACCGCAACG
TGTAGTACACGTCTCGCCGTGATCGGAAAGGGACTGCTGTCGCCAAAATA
AATGGGACGAAAACACACACACACACACACATACCATTCTACCTTTTTTG
TATGCACATTTGCGTGGCATGATAATAATACATTTGCGTTCCTGGTGCTT
GTCGTTTGTCGGTTTTTTTTTTAACTTTTCTTTTCCATCTCCACCAGTGC
CTCGTTCGATGCGACGGTGAAGCTCTGGGACGTGCACGCAGGGAAGGTGG
TGTCCACCCTTCAGAGGCACCAAGACCCGGTCTACAGCGTCGCCTTCAGC
CCATCAGGTGCGTCTCGTGTGGGTGTGTCCGGTGTGTCCTGTGTGTGTGG
GTGCGTCCCTTGTTTGTCTGGTGCTCAAGGGTGTTTCGATTGTAGCCGTG
CACTTTACACTCGTCTGCTCGTGTTGCTTAAACTACCAGCTCTCGTCCAT
TGACTCCTTGACATGGGGTGCGGTCAGTACCGTGAAAAAACACGTGGAAA
ACACGTTTCCTTCCCTTTCTGCTGTCTTGACGAAGACAAAACCCTCCTCG
TAGTATACGGTGACAGTTTGAAGGGCCAGTCAAGTATTCCACTCCACATA
ACGTTTATCGCAAAATGTTTTTTTTTCTTAGTTTTCACACACCCAGATGA
CTCCACTCAAACTGGGCCCGCCCCCCGCTTCGCTCCATTTTTTCATTTCA
TATGATGCCCCTTCATGTACACCCAACTCCAACATTAACTCAACTCAAGG
TGACTACCTCGTGAGCGGATCGTTCGCCGGTCACTTGTACATCTGGAGCG
TCAAGGATGGCACTCTCGTCAAGAGCTACCAGGTATGTACACAGTATAAC
GCAGGCACTCTAGCCTATGTCCGTGATCTCTTGTCACTCTTGTTAAGAGC
TATGTACCATACCATCATACATCGTACCAGGTACCGCAACGAGACACTGC
TGTACCGGCTTGGATGACGGAAGAGCAGTGTATCACACCCTCCGCATTAC
TTGCTTACAAGACTCGATCAGAACTCGGTTGTGGTGCATACAGAAGTATT
ATTAATAGTGGGGCAAGGGTGACACGTTCGAAGCCGCGTGGACAGGGCAA
CCAGCCTATATACTTGTACACTCTAACTCTCCTCTTGTCTCTATCTTGTA
TGATATGACTCTCTTCTCTTCTCTTCTCTTCTGCCAGGGTGAGGGCGACA
TCTTCGAAGTCGCCTGGAATTTCCGAGAGGACCGCATCGCGGCGTGCTTC
TCCACCAGCATGGTGGCCGTCATGGACTTCCGCATGTAGTTTGCCTTTTT
TTTATCACAGCAGTAGCACTCTAGCTGCTGTGCCCAGTTTTGGATTCGTC
TGCTTCAGCGCTATTTACAGTATATATGTGTTGGCTCTTTTTTCTCTCTT
CTTGCTCAATCAACTCCCGTAGCACGCACAGCAGAAGTGCCGCCGTCTCA
TTGGCCAGCCAGTTTCTTCGTTGGTGGTCTGGTCGGCACTATACAATAAT
AATGGTACGTGTCGTGTTCGAGCGGTGTGAGTTGGATTGGGCGACAGCAA
GACGAAGACGGCCAATAGGGGCCAACCCGGCGATCCAAGAATACAAGTAT
AATGCAAGGCCGCCCTTTTACTTTCCTCCCCCTCCCTCCCATCCCTGATG
TTGGCTTGTCCTAGCTATAGGGTGGCGAGGGGGGGGTGTAATGTAATTCA
GCTTTTTTGTTTCGTTCTTTTGTTTGTCGGCGTGGTGGTAAACCGGATGT
TGTTTTTGTTGCACATTTGTTGTGAGTGTTGTGCGGAGGGTAGGGCAGGG
GGGGGGGCACTTGTCTATGTTTTTTGTATCGACCTCGGTAAGATGAGGTA
TAGTGCACGTAGGGTAAGCTATAGCTATGGCCAGCCTTCCCTTCTGTTGC
TTCGAGGCGACGTGCCCTACACAGTAGTAGAGGCACATGCTGCCGTGCTG
TGCTGTATGCGGATTTGTAGACTCAAGATGAAGAGGGGGCGCGGCGGTGA
CTTCCGTTCCATTTTGTTATGTTGTTGCTACAAGTGTAGGCTAACAGCTC
ATCAACACCATGGCATTCGAGTGCTTGGACTCTTCTCTGGATAAGGTTGG
AAAAAGCGGGGATGGGG
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Coding sequence (CDS) from alignment at C-linearis_contig88:122359..133675-

>mRNA_C-linearis_contig88.16335.1 ID=mRNA_C-linearis_contig88.16335.1|Name=mRNA_C-linearis_contig88.16335.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3660bp|location=Sequence derived from alignment at C-linearis_contig88:122359..133675- (Chordaria linearis ClinC8C monoicous)
ATGAAGCCGTGGAAAGAGAATGGAGCTGCCATCAGCAGCGAAGAGGTCAA
CTTCCTTGTGTTCCGCTATCTTCAAGAGTCGGATGAAGCCGTGGAAAGAG
AATGGAGCTGCCATCAGCAGCGAAGAGGTCAACTTCCTTGTGTTCCGCTA
TCTTCAAGAGTCGGGCTTCGCCCACTCCGCCTTCACGTTCGCCTACGAGA
GCCAGATCACCAAGTCCAGCGTCGCGGAAGCTCAGGCAAGTCTAGCTTCG
CCCACTCCGCCTTCACGTTCGCCTACGAGAGCCAGATCACCAAGTCCAGC
GTCGCGGAAGCTCAGGCAAGTCTAGTGGCGCCGGGCATGCTGATAACCTT
CCTGCAGAAAGGCCTGGCCTACGTCGGCATCGAGGAGCATCTCAATGAGG
TGGCGCCGGGCATGCTGATAACCTTCCTGCAGAAAGGCCTGGCCTACGTC
GGCATCGAGGAGCATCTCAATGAGGACGGTTCGGAGTCTCGATGCGACGT
TGACTTCTCGTTGTTAAAGGCGCACGTGTGCGGCGTCAAGAGCAACGGCG
GCAAGGGCAAGGACCGGGGGGGCGGCGCTGGACGGTTCGGAGTCTCGATG
CGACGTTGACTTCTCGTTGTTAAAGGCGCACGTGTGCGGCGTCAAGAGCA
ACGGCGGCAAGGGCAAGGACCGGGGGGGCGGCGCTGTCGGCGGCGAGGGG
CTGCAAAGGGGCGGGAGCGAGCGAGAAGGGCCAGGCAGCGGCAGCGGCAG
CGGTCGGGATAACCCCAAAGAAAACTCCAACTCCAACGACGACGACGACG
ACCATGACGCCGATCTCGCGAGGGGCACAAACGGCGGCGGCGAAGCCGAT
CTCGGCAAGGGCGGGCACGGGCACAAGGGCGCCGCTGGATTCTCCGGCGG
TGCCGGCGGCGCACACGCGGTAGACAACGGGGATGCCATGGCGATGGAGG
TTGACACCGCGGAGGGCGAAGAGAGGGGCAGTGCCGCGGGCTTCGGGCAG
GAGAATGGGGGTCAAGCGGGGGCGGCGGCGAACGGCGAGGGTGGTGGCAT
GAGTAGAGATGGAGACGAGGGTCTTTTCAAGGGCGGGGCGCGCGAATGCG
GAGAGATCCCGGAGGGGGACGTGGCGGTGCTCACCAACCACCACTCGGAG
TCGGCGGCGAGGGGCTGCAAAGGGGCGGGAGCGAGCGAGAAGGGCCAGGC
AGCGGCAGCGGCAGCGGTCGGGATAACCCCAAAGAAAACTCCAACTCCAA
CGACGACGACGACGACCATGACGCCGATCTCGCGAGGGGCACAAACGGCG
GCGGCGAAGCCGATCTCGGCAAGGGCGGGCACGGGCACAAGGGCGCCGCT
GGATTCTCCGGCGGTGCCGGCGGCGCACACGCGGTAGACAACGGGGATGC
CATGGCGATGGAGGTTGACACCGCGGAGGGCGAAGAGAGGGGCAGTGCCG
CGGGCTTCGGGCAGGAGAATGGGGGTCAAGCGGGGGCGGCGGCGAACGGC
GAGGGTGGTGGCATGAGTAGAGATGGAGACGAGGGTCTTTTCAAGGGCGG
GGCGCGCGAATGCGGAGAGATCCCGGAGGGGGACGTGGCGGTGCTCACCA
ACCACCACTCGGAGGTGTTTATGTGCGCATGGAACCCGAAGTATGATCTG
CTGGCGTCAGGGTGTTTATGTGCGCATGGAACCCGAAGTATGATCTGCTG
GCGTCAGGCTCCGGAGACTCCACGGCGCGGATATGGTCAATATCACCCAA
GCTGCGCTCCGGAGACTCCACGGCGCGGATATGGTCAATATCACCCAAGC
TGCGTGGTTCGAAGGTGGCAGAGGAGGCCTCGAGGACGTCAAGGGTGCTG
AAGCACTCTAGGGAGGTGGGAGACAAGAACAAGGACGTGACCACGCTCGA
GTGGAACAGAGAGGGCACGCTTTTGGCTACAGTGGTTCGAAGGTGGCAGA
GGAGGCCTCGAGGACGTCAAGGGTGCTGAAGCACTCTAGGGAGGTGGGAG
ACAAGAACAAGGACGTGACCACGCTCGAGTGGAACAGAGAGGGCACGCTT
TTGGCTACAGGGTCCTACGACGGGGTGGCGCGCATTTGGTCCCAGGACGG
AGCGCTGCAGCACACGCTCGAGGCGCACGAAGGCCCCATTTTCTCTCTCA
AGTGGAACGATAAGGGTCCTACGACGGGGTGGCGCGCATTTGGTCCCAGG
ACGGAGCGCTGCAGCACACGCTCGAGGCGCACGAAGGCCCCATTTTCTCT
CTCAAGTGGAACGATAAGGGGAACTTCCTGCTGAGCGGTAGCTCTGACAA
GTCGGCGATCGTGTGGGACGTGGCGAGGGGAGAAGTCCAGCAGCAGTTCA
GATTTCACGAGGCGCCTACGCTGGGGAACTTCCTGCTGAGCGGTAGCTCT
GACAAGTCGGCGATCGTGTGGGACGTGGCGAGGGGAGAAGTCCAGCAGCA
GTTCAGATTTCACGAGGCGCCTACGCTGGACGTGGATTGGAAGGACGACC
TGACGTTTGCGACGTGCTCGACGGACAAGGCCATACACACCTGCGTCGTC
GGGGAGGAGTACCCAAGACAGACCTTCACCGGACGTGGATTGGAAGGACG
ACCTGACGTTTGCGACGTGCTCGACGGACAAGGCCATACACACCTGCGTC
GTCGGGGAGGAGTACCCAAGACAGACCTTCACCGGACACATGGACGAGGT
GAACGCGATCAAGTGGGACCCTAGCGGCAGCTTGCTGGCCAGCTGTTCCG
ACGACTACACAGCCAAGGACACATGGACGAGGTGAACGCGATCAAGTGGG
ACCCTAGCGGCAGCTTGCTGGCCAGCTGTTCCGACGACTACACAGCCAAG
ATCTGGAAGATGGGGCAGACGTCGTGCGTCCACAACCTGGAGGAGCACGA
CAAGGAGATCTACACCATCAAGTGGAGTCCAAGGCCAGAGAAGAAGCTAC
TGTTGGCCAGATCTGGAAGATGGGGCAGACGTCGTGCGTCCACAACCTGG
AGGAGCACGACAAGGAGATCTACACCATCAAGTGGAGTCCAAGGCCAGAG
AAGAAGCTACTGTTGGCCAGTGCCTCGTTCGATGCGACGGTGAAGCTCTG
GGACGTGCACGCAGGGAAGGTGGTGTCCACCCTTCAGAGGCACCAAGACC
CGGTCTACAGCGTCGCCTTCAGCCCATCAGTGCCTCGTTCGATGCGACGG
TGAAGCTCTGGGACGTGCACGCAGGGAAGGTGGTGTCCACCCTTCAGAGG
CACCAAGACCCGGTCTACAGCGTCGCCTTCAGCCCATCAGGTGACTACCT
CGTGAGCGGATCGTTCGCCGGTCACTTGTACATCTGGAGCGTCAAGGATG
GCACTCTCGTCAAGAGCTACCAGGTGACTACCTCGTGAGCGGATCGTTCG
CCGGTCACTTGTACATCTGGAGCGTCAAGGATGGCACTCTCGTCAAGAGC
TACCAGGGTGAGGGCGACATCTTCGAAGTCGCCTGGAATTTCCGAGAGGA
CCGCATCGCGGCGTGCTTCTCCACCAGCATGGTGGCCGTCATGGACTTCC
GCATGTAGGGTGAGGGCGACATCTTCGAAGTCGCCTGGAATTTCCGAGAG
GACCGCATCGCGGCGTGCTTCTCCACCAGCATGGTGGCCGTCATGGACTT
CCGCATGTAG
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