prot_C-linearis_contig86.16216.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig86.16216.1
Unique Nameprot_C-linearis_contig86.16216.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length283
Homology
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: D8LSC7_ECTSI (Cytochrome b561 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC7_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 1.050e-168
Identity = 241/281 (85.77%), Postives = 260/281 (92.53%), Query Frame = 0
Query:    2 MESLMQRLKVVLDKITTARARVVTASKSPAWVKPRFLTHIMGPLIAVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGKMGLLLYDLSTTSFLLGLWSFFGLSVVAVVVPVLLAYAWLNVNLQMHETKHITVPVYSDAADAQAGESLTAPETKQLAEEGVPESKGERDYPL 282
            ME LMQ++KVVLDKITTARARVV ASKSPAWVKPRFLTHIMGP+IA+IVIASTF+KTE L+LFSLHATCM+LAFVVLMPEGVVAYRNHLLLDSLSPIMSNG KAKKRTIHLTLQVLASMFAALGL FI  NK +HRN+ILP T HGV G +TLLAMVMQ VVGRLKH+SFTSGV+DARNRGK+YRWHGKMGLLLYDLST S +LGLW+FFGLSVVAVVVP++LAYAWLNVNLQMHETKHITVPVYS+  D  AGE LTAPETKQL EEGVPESKGER+YPL
Sbjct:    1 MEGLMQKMKVVLDKITTARARVVAASKSPAWVKPRFLTHIMGPVIALIVIASTFSKTESLNLFSLHATCMALAFVVLMPEGVVAYRNHLLLDSLSPIMSNGTKAKKRTIHLTLQVLASMFAALGLFFIAGNKVYHRNSILPRTWHGVVGAITLLAMVMQVVVGRLKHMSFTSGVIDARNRGKKYRWHGKMGLLLYDLSTVSVVLGLWTFFGLSVVAVVVPLMLAYAWLNVNLQMHETKHITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGEREYPL 281          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: A0A6H5L675_9PHAE (Cytochrome b561 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L675_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 8.510e-111
Identity = 165/189 (87.30%), Postives = 175/189 (92.59%), Query Frame = 0
Query:    2 MESLMQRLKVVLDKITTARARVVTASKSPAWVKPRFLTHIMGPLIAVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGK 190
            ME LMQ+LKVVLDKITTARARVV A KSPAWVKPRFLTHIMGP+IAVIVIASTF+KTE L+LFSLHATCM+LAFVVLMPEGVVAYRNHLLLDSLSPIMSNG KAKKRTIHLTLQVLASMFAALGL FI  NK +HRN+ILP T HGV G +TLLAMVMQ VVGRLKH+SFTSGV+DARNRGKRYRWHGK
Sbjct:    1 MEGLMQKLKVVLDKITTARARVVAAFKSPAWVKPRFLTHIMGPVIAVIVIASTFSKTESLNLFSLHATCMALAFVVLMPEGVVAYRNHLLLDSLSPIMSNGTKAKKRTIHLTLQVLASMFAALGLFFIAGNKVYHRNSILPRTWHGVVGAITLLAMVMQVVVGRLKHMSFTSGVIDARNRGKRYRWHGK 189          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: A0A836C9M8_9STRA (Cytochrome b561 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9M8_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.740e-54
Identity = 105/273 (38.46%), Postives = 160/273 (58.61%), Query Frame = 0
Query:    7 QRLKVVLDKITTARARVVTASKSPAWVKPRFLTHIMGP--LIAVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGKMGLLLYDLSTTSFLLGLWSFFGL-SVVAVVVPVLLAYAWLNVNLQMHETKHITVPVYSDAADAQAGESLTAPETKQLAEEGVPESKG 276
            + L+  LD+ T  R R+ ++  +P W+KP+++TH++    +I ++VI +   +T    +FS H   MSL F++ M  GV+AYRN  LLD LSPIM +G   K RT+H+T Q  A  F  LGLLFI ++K  H + ++PH+IH V G+  L+A  +Q  VG+LK+ S T      R + ++  WHGKMGLLLYD++  + L GLW+  G+ ++ ++V+ ++L   W+N+N QM E +   V  YS          L   +T   AEE   E  G
Sbjct:    7 ENLRAALDETTVRRTRLFSSFTTPKWLKPKYMTHVLAAANVITIVVIVAIHERT--FSVFSFHPLFMSLGFLMCMSLGVIAYRNKFLLDLLSPIMMHGPTTKSRTMHITFQSFAGGFILLGLLFIVASKLKHGSTVVPHSIHAVLGSAVLVATAVQVTVGKLKYDSLT------RRQERKQLWHGKMGLLLYDVAAVTILTGLWALVGVVTLSSLVMMLMLVLLWVNINYQMSEPRPPDVAPYS---------GLNTDDTALAAEESKAEEDG 262          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: W7TJN5_9STRA (Cytochrome b-561 domain containing 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJN5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.980e-31
Identity = 76/226 (33.63%), Postives = 113/226 (50.00%), Query Frame = 0
Query:   14 DKITTARARVVTASKS-PAWVKPRFLTHIMGPLIAVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNR---GKRYRWHGKMGLLLYDLSTTSFLLGLWSFFGLSVVAVVVPVLLAYAWLNVNLQM 235
            D +T  R   V   K     V+   + H+    + + +   + A+   L LFS H   MS+  V+ M EG++AYRNH     LSPIM N  + K + IH    +LA++   +G+ FI SNK      ILP +IH   G +    MV+Q + G  K  +  SGV+    R   G  YRWHGK GL+LYD++  +   GL    G  ++  ++ + +   W  V+LQM
Sbjct:   36 DAVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQM 261          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: A0A4D9CVZ3_9STRA (Cytochrome b561 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVZ3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.630e-30
Identity = 76/227 (33.48%), Postives = 113/227 (49.78%), Query Frame = 0
Query:   13 LDKITTARARVVTASKS-PAWVKPRFLTHIMGPLIAVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNR---GKRYRWHGKMGLLLYDLSTTSFLLGLWSFFGLSVVAVVVPVLLAYAWLNVNLQM 235
            LD +T  R   V   K     V+   + H+    + + +   + A+   L LFS H   MS+  V+ M EG++AYRNH     LSPIM N  + K + IH    +LA++   LG+ FI SNK      ILP +IH   G +    MV+Q + G  K  +  SGV+    R   G  +RWHGK GL+LYD++  +   G+    G  ++   + + +   W  V+LQM
Sbjct:   48 LDNVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVLGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGIGRDGGGVLHRWHGKAGLILYDVAMATVATGVVKSLGFGLMTFFMVLHVCLVWFMVHLQM 274          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: A0A7S2SRB3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRB3_9STRA)

HSP 1 Score: 121 bits (303), Expect = 6.250e-29
Identity = 71/206 (34.47%), Postives = 112/206 (54.37%), Query Frame = 0
Query:   37 FLTHIMGPLIAVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGKMGLLLYDLSTTSFLLGLWSFFGLSVVAVVVPVLLAYAWLNVNLQ--MHETKH 240
            + THI+   +AV++I +    T    LFS H   M++  VV M EG + YRN  L+ + SPIM    K++ R+IH T+Q+ A +F+ +G++FI +NKA    +  P T+H   GT+ LL M++Q +VG  K          +R+    +RWHG  G + +DL+  + + G  SF     ++  +   LA  WL+  LQ  + E KH
Sbjct:   64 YFTHILAIPLAVLLIVAVLITTRTFSLFSFHPIFMTVGCVVFMSEGFLVYRNGTLVSTFSPIMGGSSKSQARSIHATMQISAVIFSFIGVMFILANKARLGKSFTPATLHSWIGTLALLFMLIQGLVGLAK----------SRSSSPVHRWHGSAGKVTFDLAMLAVISGSISFLPTGFLSTFIVTALAVLWLSSQLQFAISEQKH 259          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: A0A482SE52_9ARCH (Cytochrome b561 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE52_9ARCH)

HSP 1 Score: 84.7 bits (208), Expect = 3.340e-16
Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = 0
Query:  108 RTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGKMGLLLYDLSTTSFLLGLWSFFGLSVVAVVVPVLLAYAWLNVNLQMHETKHI 241
            R IH + Q + + F  LGLLFI +NK  +   I+PHT+H VAGT+ ++A+ +QA +G+ K       +++   R   YRWHG MGL+L+D+   + +LGL SF   S  +++V +L   A   V+LQ+  + ++
Sbjct:    8 RAIHQSSQFIGASFMLLGLLFILANKFDYEKTIIPHTLHSVAGTICIIAVGVQAFIGQSK----IDRLLETHRR--IYRWHGDMGLVLWDILCITTVLGLASFLPFSFFSLLVLMLPLVACTVVHLQLQSSGYL 135          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: A0A7S1CMU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMU4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.410e-11
Identity = 60/193 (31.09%), Postives = 91/193 (47.15%), Query Frame = 0
Query:   20 RARVVTASKSPAWVKPRFLTHIMGPLIAVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGKMGLLLYDLSTTSFLLGLWSFFG 212
            R+R   A + P+W+  R +   +G + A  V A   A      LFS H   M LA  VL     + Y      ++        ++A+ R  H  L + A   A +G+L I  NK      ++P ++H   G  T++A+V+QA VGR+K        ++A  R K YRWHG++G L       + +LG W FFG
Sbjct:   52 RSRSAAAPRGPSWL--RLMAVGVGVVWAACVGAEVVAVVGWATLFSFHPLPM-LAACVLAVAATMTYYGDAKTEA-------DVQAQ-RAQHRVLMMGAVGCAVVGMLAIFGNKVQRGKTLVPTSLHAWVGAATMVAVVVQAAVGRMK--------IEALPR-KVYRWHGQLGALTLAGLLAAAVLGAWKFFG 224          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: A0A6G0WDI2_9STRA (Cytochrome b561 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDI2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.210e-11
Identity = 58/195 (29.74%), Postives = 102/195 (52.31%), Query Frame = 0
Query:   47 AVIVIASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAK----KRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAGTVTLLAMVMQAVVG--RLKHVSFTSGVVDARNRGKR-YRWHGKMGLLLYDLSTTSFLLGLW-------SFFGLSVVAV-VVPVLLAY 226
            A + IA        L+LF LHA CMS+ +V    E ++ +R         P  S  +++     +R IH  +   A +F  LGL+ I  ++  +  +++PH IH   G++ +L +++Q V+G  +L  + F         +G+R +R+HGK+G L Y LS  + +LG++       ++   +VVA+ V+PV+ AY
Sbjct:   69 AAVAIAVGVIVHRGLNLFFLHAMCMSIGYVAFATEAMLVFR---------PFPSWNVRSPNQRVQRNIHRFMNQAAGIFTILGLVAICVHRWSNGKSLIPHGIHSWMGSLVILLILVQIVIGHKKLNLLLF---------QGQRSFRFHGKLGRLTYALSILTVILGIFHIYKNYMAYVWTAVVALPVIPVIYAY 245          
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Match: UPI001B7DFD64 (cytochrome b561 domain-containing protein 1 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DFD64)

HSP 1 Score: 57.8 bits (138), Expect = 3.160e-6
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 0
Query:   64 FSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMSNGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPH--TIHGVAGTVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGKMGLLLYDLSTTSFLLGLWS 209
            FS H  CM +A    M E ++ +     LDS SP     IKAK R IH  +QV A++F ++GL+FI S+K    +   PH  + H + G  T++A+  Q + G    + F   +++  +  +   +H   GLL Y ++T +  LGL S
Sbjct:   59 FSWHPACMVIAVCFCMTEAILTFS----LDS-SPFFFCSIKAKVR-IHWMMQVFATIFGSIGLVFIVSSKNISES---PHFTSWHSILGVGTVIAVCGQLLCGLC--LLFPK-LINTYSVARLRLYHATCGLLAYLMATATVELGLCS 194          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LSC7_ECTSI1.050e-16885.77Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A6H5L675_9PHAE8.510e-11187.30Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A836C9M8_9STRA3.740e-5438.46Cytochrome b561 domain-containing protein n=1 Tax=... [more]
W7TJN5_9STRA2.980e-3133.63Cytochrome b-561 domain containing 1 n=1 Tax=Nanno... [more]
A0A4D9CVZ3_9STRA5.630e-3033.48Cytochrome b561 domain-containing protein n=2 Tax=... [more]
A0A7S2SRB3_9STRA6.250e-2934.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SE52_9ARCH3.340e-1637.31Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A7S1CMU4_9STRA6.410e-1131.09Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6G0WDI2_9STRA8.210e-1129.74Cytochrome b561 domain-containing protein n=1 Tax=... [more]
UPI001B7DFD643.160e-633.11cytochrome b561 domain-containing protein 1 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006593Cytochrome b561/ferric reductase transmembraneSMARTSM00665561_7coord: 66..207
e-value: 4.0E-4
score: 18.0
IPR006593Cytochrome b561/ferric reductase transmembranePFAMPF03188Cytochrom_B561coord: 66..207
e-value: 3.8E-15
score: 56.2
IPR006593Cytochrome b561/ferric reductase transmembranePROSITEPS50939CYTOCHROME_B561coord: 34..245
score: 13.568
NoneNo IPR availableGENE3D1.20.120.1770coord: 30..242
e-value: 6.1E-14
score: 53.7
NoneNo IPR availablePANTHERPTHR15422FAMILY NOT NAMEDcoord: 54..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 230..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..86
NoneNo IPR availableTMHMMTMhelixcoord: 37..56
NoneNo IPR availableTMHMMTMhelixcoord: 207..229
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 144..163
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:243738..248322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16216.1mRNA_C-linearis_contig86.16216.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig86 243632..249486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig86.16216.1 ID=prot_C-linearis_contig86.16216.1|Name=mRNA_C-linearis_contig86.16216.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=283bp
MMESLMQRLKVVLDKITTARARVVTASKSPAWVKPRFLTHIMGPLIAVIV
IASTFAKTEKLDLFSLHATCMSLAFVVLMPEGVVAYRNHLLLDSLSPIMS
NGIKAKKRTIHLTLQVLASMFAALGLLFITSNKAFHRNNILPHTIHGVAG
TVTLLAMVMQAVVGRLKHVSFTSGVVDARNRGKRYRWHGKMGLLLYDLST
TSFLLGLWSFFGLSVVAVVVPVLLAYAWLNVNLQMHETKHITVPVYSDAA
DAQAGESLTAPETKQLAEEGVPESKGERDYPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006593Cyt_b561/ferric_Rdtase_TM