prot_C-linearis_contig84.16094.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16094.1
Unique Nameprot_C-linearis_contig84.16094.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length84
Homology
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.270e-39
Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    1 SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            SNLVCT +WLAL+RLS +W KPG+ F+IK LH+QLDNCVGENKNNIV+AF+GGL+A+ VIG AEV FL+VGHTHI+IDQVFSR
Sbjct:   11 SNLVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 93          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.840e-37
Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    1 SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            SNLVCT +WLAL+RLS +W KPG+ F+IK LH+QLDNCVGENKNNIV+AF+GGL+A+ VIG AEV FL+VGHTHI+IDQVFSR
Sbjct:   11 SNLVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 93          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5KK38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK38_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.250e-36
Identity = 63/83 (75.90%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    1 SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            SNLVCT +WLAL+RLS++W KPG+ FHIK LH+QLDNCVGENKNNIVMAF+GGL+A+ VIG AEV FL+VGHTH + DQVFSR
Sbjct:  238 SNLVCTALWLALKRLSEMWNKPGERFHIKRLHLQLDNCVGENKNNIVMAFIGGLVAAGVIGSAEVCFLIVGHTHTKTDQVFSR 320          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.350e-36
Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    1 SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            SNL CT +WLAL+RLS +W KPG+ FHIK  H+QLDNCVGENKNNIVMAF+GGL+A+ VIG AEV FL++GHTHI+IDQVFSR
Sbjct:   11 SNLECTTLWLALKRLSAMWTKPGERFHIKRRHLQLDNCVGENKNNIVMAFIGGLVAAGVIGFAEVCFLILGHTHIKIDQVFSR 93          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 4.350e-35
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    1 SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            SNLVCT +WLAL+RLS +  KPG+ F+IK LH+QLDNCVGENKNNIV+AF+GGL+A+ VIG AEV FL+VGHTHI+IDQVFSR
Sbjct:  123 SNLVCTALWLALKRLSAMGTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 205          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5JTH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH9_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 7.320e-32
Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    1 SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            SNLVCT +WLAL+RLS +WAKPG+ F+IK LH+QL NCVGE KNNIV+AF+GGL+A+ V+  AEV FL+VGHT I+ID VFSR
Sbjct:  285 SNLVCTALWLALKRLSAMWAKPGQRFYIKRLHLQLHNCVGEKKNNIVLAFIGGLVAAGVVVSAEVCFLIVGHTLIKIDHVFSR 367          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5KUA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA0_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.220e-18
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   18 LWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            ++   GK  +I    +Q+DNCV ENKN+IV+ +LG L+A  +IG  EV F+ VGHTHI+IDQVFSR
Sbjct:    1 MYVPVGKRPYIYRFTIQVDNCVSENKNHIVIGYLGSLVAQGIIGEVEVQFMPVGHTHIKIDQVFSR 66          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.000e-17
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
Query:   36 DNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            DNCVGENKNNIV+AF+GGL+A+ VIG AEV FL+VGHTHI+IDQVFSR
Sbjct:  213 DNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 260          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.850e-15
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    2 NLVCTVIWLALERL-SKLWAKPGKTFH--IKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            NL CT   LA+ R+  K    P       I+  H Q+DNCV ENKNN  + + G L+A+ V+   E+HF+MVGHTH +IDQVFSR
Sbjct:  188 NLACTAAHLAITRIIDKYHDSPPHPSGCIIQHAHWQVDNCVSENKNNFFLGYAGLLVAADVVRVVEIHFMMVGHTHTKIDQVFSR 272          
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Match: A0A7M5X9T5_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9T5_9CNID)

HSP 1 Score: 73.6 bits (179), Expect = 1.430e-13
Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    1 SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAFLGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR 83
            SNL C +I   L R++K      K     +L++QLDNC  ENKN  VMAF   L+  R++ +  + FLMVGHTH +IDQ FS 
Sbjct:   51 SNLTCNIITEVLLRMTK-----DKNTLPPVLYIQLDNCWSENKNQFVMAFCALLVGWRLVDKVRLSFLMVGHTHEDIDQTFSN 128          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN27_9PHAE2.270e-3975.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAY2_9PHAE1.840e-3775.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KK38_9PHAE1.250e-3675.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAR9_9PHAE2.350e-3674.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA02_9PHAE4.350e-3574.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTH9_9PHAE7.320e-3269.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUA0_9PHAE1.220e-1854.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN7_9PHAE1.000e-1781.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUU1_9PHAE3.850e-1548.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7M5X9T5_9CNID1.430e-1345.78Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33153FAMILY NOT NAMEDcoord: 30..83
NoneNo IPR availablePANTHERPTHR33153:SF3coord: 30..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:186782..187033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16094.1mRNA_C-linearis_contig84.16094.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 186782..187033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16094.1 ID=prot_C-linearis_contig84.16094.1|Name=mRNA_C-linearis_contig84.16094.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=84bp
SNLVCTVIWLALERLSKLWAKPGKTFHIKLLHVQLDNCVGENKNNIVMAF
LGGLIASRVIGRAEVHFLMVGHTHIEIDQVFSR*
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