prot_C-linearis_contig83.16079.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig83.16079.1
Unique Nameprot_C-linearis_contig83.16079.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length283
Homology
BLAST of mRNA_C-linearis_contig83.16079.1 vs. uniprot
Match: A0A6H5JWF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF8_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 2.050e-44
Identity = 110/286 (38.46%), Postives = 152/286 (53.15%), Query Frame = 0
Query:    1 MAGWMLSIALTRVKRDGRLGSSFLPFVYSHRYDTAKAFIHAHPSHEGLEFEVADRNVSWHGKGLLVASVLFFEFVYTLERGYHHALKNPLLLATFLGNFTSEIFRVVSSATAVREAWASCVQVVQGGFVVPEEAGG-----KFDELFNFMMLKWHRCRIGEFTKRLSKVSKSQKEAKAGSAAK-------RDQLK--IISTTGGSKEASKISSSVVQVGDKILSEQEKEVAFNLSKLSARTFGYLDGGALRGCIKQCGGDGMTLTKLDVEELRDIIRKLCPGIGED 272
            ++GW+LS AL+ V R  R   +F  FV SH+Y+ A  F+  HP  +GLE EV  RNV W G  L+ A   FFEFVYTLE GY HALK P L AT+ G+  ++I  VVSSAT V+ A+  CV  ++      +EAG       +  LF+F +LKWH  R+ ++ K+LS   K  K+ K  SA K       R++LK  +   TG   E  K ++           E++K V      + +R F  L  G L   IK CGG  +   +     LR ++R + PG+GED
Sbjct:   76 LSGWLLSSALSHVTRHKRDCPAFTSFVNSHQYEDAAQFVKVHPGLKGLEREVDRRNVKWRGLSLIFADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSIR------KEAGKGVVMRSYGVLFDFFLLKWHNMRMADYVKKLSNAQKVVKQRKDKSAEKGGDKGALRERLKSMVNKKTGVRTETRKPTTP----------ERQKRVDL-ADSIGSRDFMRLTKGELGSRIKACGG--VVSGRERQYGLRSMLRAIAPGVGED 342          
BLAST of mRNA_C-linearis_contig83.16079.1 vs. uniprot
Match: A0A6H5KPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL9_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 2.610e-43
Identity = 110/286 (38.46%), Postives = 151/286 (52.80%), Query Frame = 0
Query:    1 MAGWMLSIALTRVKRDGRLGSSFLPFVYSHRYDTAKAFIHAHPSHEGLEFEVADRNVSWHGKGLLVASVLFFEFVYTLERGYHHALKNPLLLATFLGNFTSEIFRVVSSATAVREAWASCVQVVQGGFVVPEEAGG-----KFDELFNFMMLKWHRCRIGEFTKRLSKVSKSQKEAKAGSAAK-------RDQLK--IISTTGGSKEASKISSSVVQVGDKILSEQEKEVAFNLSKLSARTFGYLDGGALRGCIKQCGGDGMTLTKLDVEELRDIIRKLCPGIGED 272
            ++GW+LS AL+ V    R G +F  FV SH+Y+ A  F+  HP  +GLE EV  RNV W G  L+ A   FFEFVYTLE GY HALK P L AT+ G+  ++I  VVSSAT V+ A+  CV  ++      +EAG       +  LF+F +LKWH  R+ ++ K+LS   K  ++ K  SA K       RD+LK  +   TG   E  K ++           E++K V      +  R F  L  G L   IK CGG  +   +    +LR ++R + PG GED
Sbjct:  185 LSGWLLSSALSHVTSHKRDGPAFTSFVNSHQYEDAAQFVKVHPGLKGLEREVDRRNVKWRGLSLIFADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSIR------KEAGKGVVMRSYGVLFDFFLLKWHNMRMADYAKKLSNAQKVVEQRKDKSAEKGGDKGALRDRLKSMVNKKTGVRTETRKPTTP----------ERQKRVDL-ADSIGFRDFMRLTKGELASRIKACGG--VVSGRERQYDLRSMLRAIAPGEGED 451          
BLAST of mRNA_C-linearis_contig83.16079.1 vs. uniprot
Match: A0A6H5K2P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P3_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.700e-29
Identity = 68/154 (44.16%), Postives = 90/154 (58.44%), Query Frame = 0
Query:   30 HRYDTAKAFIHAHPSHEGLEFEVADRNVSWHGKGLLVASVLFFEFVYTLERGYHHALKNPLLLATFLGNFTSEIFRVVSSATAVREAWASCVQVVQGGFVVPEEAGG-----KFDELFNFMMLKWHRCRIGEFTKRLSKVSKSQKEAKAGSAAK 178
            H+Y+ A  F+  HP  +GLE EV  RNV W G  L+VA   FFEFVYTLE GY HALK P L AT+ G+  ++I  VVSSAT V+ A+  CV  ++      +EAG       +  LF+  +LKWH   + ++ K+LS   K  K+ K  SA K
Sbjct:  117 HQYEDAAQFVKVHPGLKGLEREVDRRNVKWRGLSLIVADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSIR------KEAGKGIVMRSYGVLFDLNILKWHNMLMADYAKKLSNAQKVVKQRKDKSAEK 264          
BLAST of mRNA_C-linearis_contig83.16079.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.630e-20
Identity = 65/192 (33.85%), Postives = 103/192 (53.65%), Query Frame = 0
Query:    1 MAGWMLSIALTRVKRDGRLGSSFLPFVYSHRYDTAKA-FIHAHPSHEGLEFEVADRNVSWHGKGLLVASVLFFEFVYTLERGYHHALKNPLLLATFLGNFTSEIFRVVSSATAVREAWASCVQ--VVQGGFVVPEEAGGKFDELFNFMMLKWHRCRIGEFTKRLSKVSKSQKEAKAGSAAKRDQLKIISTTG 189
            +AGW+LS A +R KR   +      F+  H +  + A  I   P  + +  EV  RN   +G GLL  ++ ++EFV+ +E G +H L++P  L T+LG+ ++EI RVV+ ++ VR AWA C    V    F    E     D+++ F++ K+H  R+G+F +RLS+ S  +     G  A R  L+  S  G
Sbjct:  146 IAGWLLSKAWSR-KRRHNIPDQEWDFIVQHNHSPSSAGAIERDPILQDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHVENGIYHFLRDPYFLGTYLGDLSAEILRVVTESSEVRRAWAKCCPSAVAPPPFEAQPEI---LDDIYKFVLQKFHNVRMGDFARRLSQNSTLR--LSKGELALRQNLRATSAKG 331          
BLAST of mRNA_C-linearis_contig83.16079.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.640e-11
Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = 0
Query:    1 MAGWMLSIALTRVKRDGRLGSSFLPFVYSHRYDTAKAFIHAHPSHEGLEFEVADRNVSWHGKGLLVASVLFFEFVYTLERGYHHALKNPLLLATFLGNFTSEIFRVVSSATAVREAWASC 120
            +AGW  S ALT   R   L   ++  V  +   +++  I  +         V  +N   +G GLL  ++ + EFVY +ERG  H LKNP+ LA  LG   +EIF+VVS A  V+E W +C
Sbjct:  189 IAGWAASKALTHQARHN-LSQDWVRVVQHNTRRSSREAIFTNVMLRDFVAGVDQKNDLKNGPGLLYPTMDWVEFVYAVERGIFHFLKNPIFLAACLGGLPAEIFKVVSEAEVVKEMWGNC 307          
BLAST of mRNA_C-linearis_contig83.16079.1 vs. uniprot
Match: A0A6H5JIR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR5_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.640e-8
Identity = 43/121 (35.54%), Postives = 61/121 (50.41%), Query Frame = 0
Query:    1 MAGWMLSIALTRVKRDGRLGSSFLPFVYSHRYDTAKAFIHAHPSHEGLEFEVADR-NVSWHGKGLLVASVLFFEFVYTLERGYHHALKNPLLLATFLGNFTSEIFRVVSSATAVREAWASC 120
            + GWM S A T  +R   L   +   V  + Y +++    A     G   EV DR N   HG  LL  ++ + EFV+ LE G  H LK+P+ L  FL +F +EIF+VV     V++ W  C
Sbjct:  271 VCGWMASRAWTHQRRRN-LSPDWYRIVEHNTYQSSE-MAKARDPMIGQFAEVVDRKNDLKHGPRLLYPTMQWVEFVFALETGDFHFLKDPMYLGAFLWDFPAEIFKVVGEEEYVKDMWRKC 389          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JWF8_9PHAE2.050e-4438.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPL9_9PHAE2.610e-4338.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2P3_9PHAE3.700e-2944.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW14_9PHAE1.630e-2033.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K201_9PHAE2.640e-1136.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIR5_9PHAE2.640e-835.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:776186..777034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16079.1mRNA_C-linearis_contig83.16079.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig83 775902..778371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig83.16079.1 ID=prot_C-linearis_contig83.16079.1|Name=mRNA_C-linearis_contig83.16079.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=283bp
MAGWMLSIALTRVKRDGRLGSSFLPFVYSHRYDTAKAFIHAHPSHEGLEF
EVADRNVSWHGKGLLVASVLFFEFVYTLERGYHHALKNPLLLATFLGNFT
SEIFRVVSSATAVREAWASCVQVVQGGFVVPEEAGGKFDELFNFMMLKWH
RCRIGEFTKRLSKVSKSQKEAKAGSAAKRDQLKIISTTGGSKEASKISSS
VVQVGDKILSEQEKEVAFNLSKLSARTFGYLDGGALRGCIKQCGGDGMTL
TKLDVEELRDIIRKLCPGIGEDEPVDAVAPQV*
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