prot_C-linearis_contig83.16073.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig83.16073.1
Unique Nameprot_C-linearis_contig83.16073.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length257
Homology
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BLAST of mRNA_C-linearis_contig83.16073.1 vs. uniprot
Match: D7FM02_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM02_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 5.700e-91
Identity = 152/235 (64.68%), Postives = 176/235 (74.89%), Query Frame = 0 
Query:    1 MSYPTNNNTQWEPPEVE----TMVLPPRRRSIIREEDEDGN-FEEKT-APLERWSQPSLCPCKNPSIMAYSLACCCCAMGDIGCYVRENWMCYPAYCLCASCPCCVGDTRELVAEKYNLPISEWEPDDCGWCLVKFIGMRLMCVASVCLLPCFHVAQMRAEVAFRRHGKPTVCPCXXXXXXXXXXPGVSSAKDEELDYPRNEDVKRVVTKEEVLDYPRAGAKTYEDSPPEEEVEV 229
            MSYPTN+N+ WEPP       T+VL PRRRSIIR+E+ +G   EEK   PL RW Q SLCPC+NP+IM YSL     AMGDIGCY+RENWMCYPAYCL ASCPCCVGDTRELVAEKYNLPI  W+PD+ GWC VK IG RLMC  SVCL+PC H++QMRAEVAFR+HGK TVCP XXXXXXXXXX G ++ K+EELDYPR++ VKR    E        G +   +  PE+EV+V
Sbjct:    1 MSYPTNDNSGWEPPSRRPSEGTIVLAPRRRSIIRDEEGEGEGVEEKPDPPLGRWHQHSLCPCRNPNIMLYSLCXXXXAMGDIGCYLRENWMCYPAYCLGASCPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFVKMIGARLMCFCSVCLMPCLHISQMRAEVAFRKHGKATVCPXXXXXXXXXXXXGETTYKEEELDYPRDDGVKRPHAIEXXXXXXXGGKRV--ELTPEKEVKV 233
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM02_ECTSI5.700e-9164.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:695700..697919 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16073.1mRNA_C-linearis_contig83.16073.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig83 694986..697967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig83.16073.1 ID=prot_C-linearis_contig83.16073.1|Name=mRNA_C-linearis_contig83.16073.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=257bp
MSYPTNNNTQWEPPEVETMVLPPRRRSIIREEDEDGNFEEKTAPLERWSQ
PSLCPCKNPSIMAYSLACCCCAMGDIGCYVRENWMCYPAYCLCASCPCCV
GDTRELVAEKYNLPISEWEPDDCGWCLVKFIGMRLMCVASVCLLPCFHVA
QMRAEVAFRRHGKPTVCPCCCCSCGGGEGPGVSSAKDEELDYPRNEDVKR
VVTKEEVLDYPRAGAKTYEDSPPEEEVEVVVDYPHAGARRYALDEYAPPV
PGDYPR*
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