prot_C-linearis_contig83.16057.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig83.16057.1
Unique Nameprot_C-linearis_contig83.16057.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length366
Homology
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BLAST of mRNA_C-linearis_contig83.16057.1 vs. uniprot
Match: A0A6H5KLR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLR4_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 5.030e-66
Identity = 120/234 (51.28%), Postives = 151/234 (64.53%), Query Frame = 0 
Query:  120 REMYAQMSEAGIKNLPDGGVVVGLVDQEIRKHWLGRNEYLGGVCVDLLRVKAVEAAVRKWWDFLLELLRKNSTQPSTSDRQVEYEKARRLERLKRQHFFSREETICARAVEQGVDRRRVAHPLMSIFCAIDQVEDKILVQRLGDAHLVKVAYPSRPVDLDVHQERLVFNVGGWLLSSALSRVKRQPSLGPDFLPFINSHNKHDSGAEFRRAHPELRNLELVVEERNIRFDGSYL 353
            R+ YA M+E  +K LP G  ++  V + +R HW+G+      + V LL V+ V+ A+  WW  L+  L +NS +P +S R + YEK R  ER  +Q  FS E +I  +A+E GVD RRVAH L  +F AID+V DK L Q+   AHLVKVAYP+  VDLDVHQ RLV+N+ GWLLSSALSRV RQ SLG  FLPF NSH K  S  EFR A+P    LE VVEERN  ++G  L
Sbjct:    5 RQTYAAMAEIVVKQLPTGARLIDWVGERLRVHWMGQVPEYKHIVVGLLDVQEVKDAILGWWGVLVGALVENSKKPPSSKRALAYEKKREEERFPKQEEFSSEPSIVRKALELGVDSRRVAHKLTCVFGAIDEVADKTLTQQTDAAHLVKVAYPAEDVDLDVHQRRLVYNIAGWLLSSALSRVSRQRSLGSAFLPFFNSH-KVASAEEFREAYPHFSGLEFVVEERNNPWEGKGL 237
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLR4_9PHAE5.030e-6651.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:463222..465267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16057.1mRNA_C-linearis_contig83.16057.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig83 462375..466952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig83.16057.1 ID=prot_C-linearis_contig83.16057.1|Name=mRNA_C-linearis_contig83.16057.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=366bp
MVLANMAIKCRCLAFVHSQSPTERKELREGEKRRKTTAAARRKMKRNSKA
SAEMGRRMRPGPGVCLLTTKKTKTSTSWSVTYRRIRREEEKIAGRQQQKT
ARIRPKRVRRESRNLPAATREMYAQMSEAGIKNLPDGGVVVGLVDQEIRK
HWLGRNEYLGGVCVDLLRVKAVEAAVRKWWDFLLELLRKNSTQPSTSDRQ
VEYEKARRLERLKRQHFFSREETICARAVEQGVDRRRVAHPLMSIFCAID
QVEDKILVQRLGDAHLVKVAYPSRPVDLDVHQERLVFNVGGWLLSSALSR
VKRQPSLGPDFLPFINSHNKHDSGAEFRRAHPELRNLELVVEERNIRFDG
SYLSVGGVFSFRACA*
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