prot_C-linearis_contig82.16035.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16035.1
Unique Nameprot_C-linearis_contig82.16035.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length985
Homology
BLAST of mRNA_C-linearis_contig82.16035.1 vs. uniprot
Match: A0A6H5KNY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY7_9PHAE)

HSP 1 Score: 676 bits (1744), Expect = 7.570e-228
Identity = 425/803 (52.93%), Postives = 525/803 (65.38%), Query Frame = 0
Query:  190 LRAQHGVLVDDLERCDH-DAAEGDGAGEEGLRERTLLTAACWQLRDNDGSSEAAAATEDARRDGDAALELAAVAVAADLTAVRSSGLAQKIQDALEWEGQARPLEDKLVASASRVRWMYVLRLAVELGQCDQSKWERLQQLLAEPPKSVDLKGLYSTREDVNALF---RASNGDPLHGGIFSRLTESRGELTRMVEGGQARLAKLNALLRVLWDESTAGAANASPVERAGALNDLIGVVIGETQLRPKLALRLLSALGNDAVGRARSGAEGVSSVLARDVANLRLMSKGVVDKRSQRAAVAATELCAVLRITEALAKRIEESLPAELAQRGAALQGELRARIKAYAETDRHRREADVLVAAEDFVAELPPEPSEHGPGNSHLDLMAYLLGAVTGGRRKGLDNLFKPGATTEILCGEVSTSPPSGETAPAQGEVLGAARAGLTKAEKQPPKRATDRSADHPEKQSGHQVDGRATLADIFTKISSAMPCDPDHSLAGIWGVAKARLKIAR---PRGNEEVETEAFELAVDAQVFEALQKSLHETLEAPSRPALGDLPPASAGQTSALKVVGRIRLGGHAPPSGSEVNVGDESKTLQRQAEAMQFKNKMNVVARTGLPLQSPGQGENVSSVGALVVAAKLAKRWKSAALDDGSGLDRRELERLNFLMDKRIENLSAQLAKLEQSSHAEKSMAKIMTTRVSAEEAKLSPESWATREVQRLNARIRVHREQLHGVEIRLKCFRKG-KGGMGDMEALWMSPAEREEMEANLRLILRKIAKANFLLRTMRSRWDLFRQKHRHLVPLVQDR 984
            LRAQH VLV+DL+R +  D  E D      LR+ +LLTAACWQLRDN GSS+A        +   AALELAA  VAA LT+  SS L++++ D L WEGQA PLE KLV  ASRVRWMY++RLAVELG CD ++WE    LLAEP K +DL+ L+ TR+ ++ALF   R  +G  L GG+F R TESRGEL  ++E G +RLA+ N LLR +W ES AG    S  ER  ALN L+GV++GE+QL P  AL+L SALG D + RA+S  + V   L  ++ANL L S GV+ + SQRAA+A T+L A++RI+E L+K  +E L  +LAQRGAALQ ELR ++KAYAE  + +R  +VL AAEDF+AE+PPE +EHGPGNS LD+M +LLGA+                          T  PSG+ A AQ  V  AA  G   + +Q     TDR    P KQ  H++D R  L +IF KI+SAMPCDPD  +A  W   +A   +AR   PRG+EEVE EAFELAVDAQ  E L++SL   ++ P R  L DLP +  G+     + G IRL    P SG EV   DE K LQRQAEA+++KN MN+VARTGL LQ P +     S+ A+V AAK AKRWKSAA DD SGL R ELERLN +MD RI +LS QLA L +S   E   AK   T+    E  LSP+ W  RE QRLN RIR+ +E+LHG+E RL+  RKG KG  GD+EA+WMS  ER EME NL LI RKIAKANFLLR MRSRWD+FR++HRHL PLV DR
Sbjct:    2 LRAQHCVLVEDLQRSESADVGEDDDP----LRQASLLTAACWQLRDN-GSSDAGN-----EQGTTAALELAAAVVAAGLTSA-SSDLSRRMMDTLRWEGQAPPLEGKLVGIASRVRWMYLVRLAVELGLCDLNEWEEALHLLAEPKKPIDLESLHETRQGIHALFHGFRGGDGPLLLGGVFPRSTESRGELVSLIERGHSRLARFNVLLRAIWSES-AGTGRGSFEERTEALNTLVGVMLGESQLHPSFALKLFSALGLDVIRRAKSSPDKVPQSLQGEIANLGLSSGGVLSEASQRAALAVTKLAALVRISEVLSKSRDE-LSLDLAQRGAALQAELRVQVKAYAEHQQSQRREEVLSAAEDFIAEMPPEEAEHGPGNSQLDIMTHLLGAII-------------------------TGTPSGKEARAQSGVPDAAMVGSNHSSEQALASPTDRRTPDPMKQDRHRLDARGNLLEIFAKIASAMPCDPDQYVASAWRTMQASRTLARMERPRGDEEVELEAFELAVDAQALETLRESLLGAIDRPER-NLCDLPVSVNGEIE-QPLSGGIRLI-TVPLSGLEVTHDDEMKALQRQAEAVRYKNAMNIVARTGLALQPPAEA-GTPSLTAIVAAAKHAKRWKSAAQDDVSGLGRPELERLNSIMDMRITSLSDQLATLVRSKKVEPGTAK--QTKAD-HEVVLSPDDWVKRERQRLNVRIRIRKEKLHGMETRLRHIRKGDKGRTGDVEAIWMSEDERLEMETNLFLISRKIAKANFLLRKMRSRWDIFRERHRHLAPLVHDR 759          
BLAST of mRNA_C-linearis_contig82.16035.1 vs. uniprot
Match: D7FJK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK7_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 1.930e-139
Identity = 311/666 (46.70%), Postives = 379/666 (56.91%), Query Frame = 0
Query:  231 QLRDNDGSSEAAAATEDARRDGDAALELAAVAVAADLTAVRSSGLAQKIQDALEWEGQARPLEDKLVASASRVRWMYVLRLAVELGQCDQSKWERLQQLLAEPPKSVDLKGLYSTREDVNALF---RASNGDPLHGGIFSRLTESRGELTRMVEGGQARLAKLNALLRVLWDESTAGAANASPVERAGALNDLIGVVIGETQLRPKLALRLLSALGNDAVGRARSGAEGVSSVLARDVANLRLMSKGVVDKRSQRAAVAATELCAVLRITEALAKRIEESLPAELAQRGAALQGELRARIKAYAETDRHRREADVLVAAEDFVAELPPEPSEHGPGNSHLDLMAYLLGAVTGGRRKGLDNLFKPGATTEILCGEVSTSPPSGETAPAQGEVLGAARAGLTKAEKQPPKRATDRSADHPEKQSGHQVDGRATLADIFTKISSAMPCDPDHSLAGIWGVAKARLKIARPRGNEEVETEAFELAVDAQVFEALQKSLHETLEAPSRPALGDLPPASAGQTSALKVVGRIRLGGHAPPSGSEVNVGDESKTLQRQAEAMQFKNKMNVVARTGLPLQSPGQGENVSSVGALVVAAKLAKRWKSAALDDGSGLDRRELERLNFLMDKRIENLSAQLAKLEQSSHAEKSMAKIMTTRVSAEEAKLSPESWATR 893
            +LRDN GSS+A      A     AALELAA  +AA LT+  SS L++++ D L WEGQA PLEDKLV  ASRVRWMY++RLAVELG CD S+W+ +  LLAEP K +DL  LY TR+ ++ALF   R  +G  L  G+F R TESRGEL  ++E GQARLAKLN LLR LW ES AG    S  +R  ALN L+GV++GE+QL P  AL+L SALG D + RA+SG + V   L  D+ANL L S GV+ + SQRAA+A T+L A+ RI+EAL+K  +E L  ++AQRGAALQ ELR                                                                                          QG V  AA  G   + +Q     TDR    P KQ  H++D R  L +IF KI+SAMPCDPD  +A  W   +AR  I RPRG+EEVE EAFELA+DAQ  E L++SL E +  P R  L DLP  S  +     + G IRL   AP SGSEV   DE K LQRQAEA+++KN MN+VARTGL L SP  G    S+ A V AAK AKRW+SAA DDGSGL R ELERLN +M+ RI NLS QLA L +S + E   AK   T+    E  LSP+ W  R
Sbjct:   18 KLRDN-GSSDAGNEQGTA-----AALELAAAVIAAGLTS-GSSDLSRRMMDTLRWEGQAPPLEDKLVGIASRVRWMYLVRLAVELGLCDLSEWQEVSNLLAEPKKPIDLGSLYETRQGIHALFHGFRGGDGPLLLDGVFPRSTESRGELVSLIERGQARLAKLNVLLRALWSES-AGTGRGSFEDRTEALNTLVGVMVGESQLHPNFALKLFSALGLDVIRRAKSGPDKVPQSLQGDIANLGLSSGGVLSEASQRAALAVTKLAALARISEALSKSRDE-LSLDVAQRGAALQAELRV-----------------------------------------------------------------------------------------QGGVPDAAMVGSNHSSEQALASPTDRRTPDPMKQDRHRLDARGNLLEIFAKIASAMPCDPDQDVASAWRTMQAR--IERPRGDEEVELEAFELAMDAQALETLRESLLEAIHRPER-NLFDLP-VSVNEEIEQPLSGGIRLI-TAPLSGSEVTHDDEKKALQRQAEAVRYKNAMNIVARTGLALPSPA-GVGTPSLTAFVAAAKHAKRWRSAAQDDGSGLGRPELERLNSIMEMRITNLSDQLATLVRSKNVEPGTAK--QTKAD-HEVVLSPDDWVKR 576          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNY7_9PHAE7.570e-22852.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJK7_ECTSI1.930e-13946.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..55
NoneNo IPR availableCOILSCoilCoilcoord: 113..133
NoneNo IPR availableCOILSCoilCoilcoord: 895..915
NoneNo IPR availableCOILSCoilCoilcoord: 850..870
NoneNo IPR availableCOILSCoilCoilcoord: 60..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:845893..853528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16035.1mRNA_C-linearis_contig82.16035.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 845893..853528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16035.1 ID=prot_C-linearis_contig82.16035.1|Name=mRNA_C-linearis_contig82.16035.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=985bp
AGSLDDSLQTITKLESAVEGCGKDAIPFKEQNERRENLQALVREEARRNR
EEQIQAVTRRAGLLEENKRLRAEVEKAESALSDLQTPAETRKNSLRRHQS
EARHLESLPLPQVKSASTKLAQTERQLSQLSRKHGRTAAQRAPPTPIPKP
EQQAQSTPAPTPRNKPREDSAPGREDTRVDPQAWYQLETLRAQHGVLVDD
LERCDHDAAEGDGAGEEGLRERTLLTAACWQLRDNDGSSEAAAATEDARR
DGDAALELAAVAVAADLTAVRSSGLAQKIQDALEWEGQARPLEDKLVASA
SRVRWMYVLRLAVELGQCDQSKWERLQQLLAEPPKSVDLKGLYSTREDVN
ALFRASNGDPLHGGIFSRLTESRGELTRMVEGGQARLAKLNALLRVLWDE
STAGAANASPVERAGALNDLIGVVIGETQLRPKLALRLLSALGNDAVGRA
RSGAEGVSSVLARDVANLRLMSKGVVDKRSQRAAVAATELCAVLRITEAL
AKRIEESLPAELAQRGAALQGELRARIKAYAETDRHRREADVLVAAEDFV
AELPPEPSEHGPGNSHLDLMAYLLGAVTGGRRKGLDNLFKPGATTEILCG
EVSTSPPSGETAPAQGEVLGAARAGLTKAEKQPPKRATDRSADHPEKQSG
HQVDGRATLADIFTKISSAMPCDPDHSLAGIWGVAKARLKIARPRGNEEV
ETEAFELAVDAQVFEALQKSLHETLEAPSRPALGDLPPASAGQTSALKVV
GRIRLGGHAPPSGSEVNVGDESKTLQRQAEAMQFKNKMNVVARTGLPLQS
PGQGENVSSVGALVVAAKLAKRWKSAALDDGSGLDRRELERLNFLMDKRI
ENLSAQLAKLEQSSHAEKSMAKIMTTRVSAEEAKLSPESWATREVQRLNA
RIRVHREQLHGVEIRLKCFRKGKGGMGDMEALWMSPAEREEMEANLRLIL
RKIAKANFLLRTMRSRWDLFRQKHRHLVPLVQDR*
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