prot_C-linearis_contig82.16029.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16029.1
Unique Nameprot_C-linearis_contig82.16029.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length190
Homology
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: D7FIJ0_ECTSI (Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ0_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 8.220e-108
Identity = 153/183 (83.61%), Postives = 162/183 (88.52%), Query Frame = 0
Query:    1 MEASAEEEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETFEPSRV 183
            M  SA+EEYVKT  GD VFKKAHVHG  NL+L G+SIIMPG IIRGELQ IRIGRYC +GE TVIRPAYR  IEQE SNLKCRFTPLSVG+HTYIGK+CVVESAGIGC VRIEDGCVLGRNSFVRDNCHLL GTVLPEGAVVPPFTVLQGCPA+MVS+LHEST SVW EDAV+ YETFEPS V
Sbjct:    1 MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYR--IEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSAV 181          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: A0A7S1ZJQ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJQ9_TRICV)

HSP 1 Score: 157 bits (398), Expect = 1.800e-45
Identity = 76/179 (42.46%), Postives = 121/179 (67.60%), Query Frame = 0
Query:    5 AEEEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQA-IRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETFEPSR 182
            AEE Y+KT+  ++V + A +HGS+++ ++GKS++ PGA++RG+L A +R+GRYC +G+ +V+RP    A   +G+    R  P S+GNHT IG++CVVE+A +G +V + DGCVLG+ S ++D C +  GTVL   AVVPPF+++ G P ++V  + ES A+   + ++  Y  F   R
Sbjct:   17 AEEGYIKTAANNYVSRSASIHGSRHVEIRGKSVVRPGAVVRGDLGAPVRVGRYCRVGDRSVLRPP--SASLPDGTE---RRLPQSIGNHTSIGRDCVVEAAAVGFSVLVGDGCVLGKRSVIKDCCRIEPGTVLAPDAVVPPFSIVSGSPGRVVGEMPESAAAEIPDRSLGEYAAFVKER 190          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: A0A7S3QBQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBQ9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.540e-44
Identity = 76/190 (40.00%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    3 ASAEEEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAI------------EQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVS--ILHESTASVWAEDAVSLYETF 178
            A  EE YVKT+  ++V +KA +HG++N+ +KGKSI+ P   IRG+ Q +RIGRYC IGE +++RP   QA             E E      +F PL VG+HT IGK CV+E+A +G +V I D CV+ +   ++D C++ +GTV+ +  V+PPF+ + GCP  M+   ++ ES  +   +D V  +  F
Sbjct:   41 APEEEGYVKTAAYNYVSRKAFIHGAKNVEMKGKSIVHPKVHIRGDFQTVRIGRYCHIGEGSILRPPSYQASLDTSHEGASENGENEEEKQLIKFLPLIVGSHTQIGKGCVIEAAAVGSSVYIGDNCVISKRVIIKDCCYIASGTVIAQDTVIPPFSRVAGCPGGMIENGLMAESITTTSVDDCVEQFNEF 230          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: A0A0L0DIQ2_THETB (Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIQ2_THETB)

HSP 1 Score: 149 bits (376), Expect = 2.360e-42
Identity = 73/178 (41.01%), Postives = 119/178 (66.85%), Query Frame = 0
Query:    7 EEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETFEPSRVS 184
            EE+++T++G+ V + + + GSQN+ L GKS+++PG+IIRG+L A+RIGRYC I +  V+RPAY+     +G N    +  LS+G+  Y+GK+ VVE+A IG  V I +G ++ + + + D C +L G V+PE AV+PPF++  G PA ++  L E+   V  E A + YE++ P++ +
Sbjct:    9 EEWIETASGNKVSRASVLCGSQNIILNGKSLVLPGSIIRGDLAAVRIGRYCVISDRVVLRPAYKAL--PKGLN----YFQLSLGDCVYVGKDAVVEAASIGSHVIIGEGAIVSKRAVILDCCEILPGAVVPEDAVIPPFSIYGGNPAVLIGELTEAAQRVHEEKAFACYESYVPAKAA 180          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: A0A0N4UAM7_DRAME (Uncharacterized protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UAM7_DRAME)

HSP 1 Score: 141 bits (355), Expect = 4.040e-39
Identity = 65/172 (37.79%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    7 EEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETF 178
            +E+V+T+TG+ V KK+ + GSQN+ L GKSI+M   I+RG++ +IR G+YC +GE TVIRP+Y++       +    F P+ +G+H +I  +C++ +A IG  V I  G ++GR+  ++D   +L    +P  AV+PPF+++ G P  ++  L EST ++  +   S Y+ F
Sbjct:   11 QEFVETATGNKVNKKSRLFGSQNIVLNGKSILMKDCILRGDMNSIRAGKYCVVGERTVIRPSYKRF------SKGLTFFPVHIGDHVFIENDCIIMAAQIGAFVHIGSGAIVGRSVIIKDCVQVLPNAFVPHDAVIPPFSIVSGNPGTIIGELPESTQNLMTQATRSFYDNF 176          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: A0A7S2V2Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.800e-39
Identity = 70/173 (40.46%), Postives = 110/173 (63.58%), Query Frame = 0
Query:    7 EEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETFE 179
            EE+++T+T + V KK  +     + + GK+I+M G IIRG+L  + +GRYC +G +T+IRPA +  I +E +     F  + +G++T IG++C++E+A IG  V+     VLG+ S VRD C L  GTVL  GAVVPPF+V+ GCP ++ S L E++   ++  A   Y+ F+
Sbjct:   10 EEFIRTTTNNLVSKKVRISSPNFVKITGKTILMHGVIIRGDLAKVEMGRYCEVGANTIIRPALK--ISEEPT-----FADVKIGDNTRIGEDCIIEAAWIGTNVQXXXXXVLGKGSLVRDCCRLEDGTVLAPGAVVPPFSVVAGCPGRVTSELPENSPEEFSHAAQDSYKKFK 175          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: A0A3S1H5M8_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1H5M8_ELYCH)

HSP 1 Score: 139 bits (351), Expect = 1.440e-38
Identity = 67/173 (38.73%), Postives = 107/173 (61.85%), Query Frame = 0
Query:    8 EYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETFEP 180
            +Y++T++G+ V +++ + GSQN+ + GK+I+M G +IRG+L  +RIGR+C I  + VIRPA+++       +    F PL +G+H  I +N VV +A +G  V I   CV+GR + ++D C +   T+LP  AVVPPFT+  G P K+ S L + T  +  +  V+ Y  F P
Sbjct:   12 QYIETASGNKVSRQSVLCGSQNIVINGKTIVMTGCVIRGDLANVRIGRHCIISNNAVIRPAFKRF------SKGVAFFPLHIGDHVLIEENSVVNAAQVGSFVHIGKNCVIGRRAVLKDCCAIADNTILPPEAVVPPFTLCSGSPGKLTSELPDCTQDLMTDITVNYYHHFRP 178          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: L8GIW5_ACACA (Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIW5_ACACA)

HSP 1 Score: 137 bits (344), Expect = 2.980e-37
Identity = 72/180 (40.00%), Postives = 113/180 (62.78%), Query Frame = 0
Query:    8 EYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETFEPSRVSLAA 187
            E+++T TG+ V +K+ + GSQN+ L GK+++MPGA+IRG+L A+ +G+Y  IG + VIRPA+++    +GS     F P+++G+  +I ++C+V +  IG  V +  G VLGR+S ++D C +  G+VL  G VVPPFT+  G PA     L E    +  E ++  Y TF P    +AA
Sbjct:   16 EFIETHTGNKVGRKSILCGSQNIRLHGKTVVMPGAMIRGDLGAVNVGKYSVIGRNVVIRPAHKR---YQGS---VAFFPVTIGDFVHIEEDCIVSATSIGSYVHVGRGAVLGRHSVLKDCCWVEEGSVLAPGTVVPPFTIFGGSPAVQKGQLPECFQEMQKEASLINYNTFLPQPDVVAA 189          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: H3EIY2_PRIPA (Dnc-5 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=H3EIY2_PRIPA)

HSP 1 Score: 134 bits (337), Expect = 1.810e-36
Identity = 64/172 (37.21%), Postives = 113/172 (65.70%), Query Frame = 0
Query:    7 EEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETF 178
            +EY +T++G+ +FK A + GSQN+ + GKSI+M   ++RG+L  IR+G++CFIGE T+IR ++R+    +G+ +     P+ VG+   + ++CV+ +A IG    I  G ++GR+S +++ C + AG V+P  +  PPF+V+ G PA++V  + E T  + ++ A  LYE++
Sbjct:   13 DEYTQTNSGNKIFKNASIFGSQNIIIHGKSILMRDCMLRGDLTGIRMGKFCFIGERTLIRASHRKF--SKGATM----FPMHVGDCVIVEEDCVLVAAQIGSYTHIGKGAIVGRSSIIKECCKVEAGAVIPSDSTFPPFSVIAGNPARVVGRVPECTQELISQAAKELYESY 178          
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Match: A0A0N4UWP5_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UWP5_ENTVE)

HSP 1 Score: 134 bits (337), Expect = 1.910e-36
Identity = 67/173 (38.73%), Postives = 109/173 (63.01%), Query Frame = 0
Query:   10 VKTSTGDFVFKKA-HVHGSQNLYLKGKSIIMPGAIIRGELQAIRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCVVESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQGCPAKMVSILHESTASVWAEDAVSLYETFEPS 181
            V+T+TG+ V ++  H+ GS N+ L GKSIIM G I+RG+L ++RIG+YC IGE ++IRP+++        +    + P+ +G++ +I  +CVV +A IG  V I    ++GR++ ++D   +L   V+P+ AV+PPF+++ G PA +V  L  ST  +  +   S YE F PS
Sbjct:   14 VETATGNKVSRRGTHLFGSTNIVLSGKSIIMDGCILRGDLNSVRIGKYCVIGERSIIRPSFK------AFSKGLTYFPVHIGDYVFIENDCVVMAAQIGSFVHIGSNAIIGRSTVLKDCVQILPDAVIPQDAVIPPFSIVGGNPAVIVGELPPSTQDLMMQANKSFYENFVPS 180          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ0_ECTSI8.220e-10883.61Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S1ZJQ9_TRICV1.800e-4542.46Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3QBQ9_9STRA1.540e-4440.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A0L0DIQ2_THETB2.360e-4241.01Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC... [more]
A0A0N4UAM7_DRAME4.040e-3937.79Uncharacterized protein n=1 Tax=Dracunculus medine... [more]
A0A7S2V2Q0_9STRA8.800e-3940.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A3S1H5M8_ELYCH1.440e-3838.73Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
L8GIW5_ACACA2.980e-3740.00Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeb... [more]
H3EIY2_PRIPA1.810e-3637.21Dnc-5 n=2 Tax=Pristionchus pacificus TaxID=54126 R... [more]
A0A0N4UWP5_ENTVE1.910e-3638.73Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 92..125
e-value: 1.9E-4
score: 21.0
NoneNo IPR availableGENE3D2.160.10.10coord: 14..184
e-value: 5.2E-42
score: 144.9
NoneNo IPR availablePANTHERPTHR46126FAMILY NOT NAMEDcoord: 5..181
NoneNo IPR availablePANTHERPTHR46126:SF1DYNACTIN SUBUNIT 5coord: 5..181
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 9..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:767462..770436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16029.1mRNA_C-linearis_contig82.16029.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 766745..770514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16029.1 ID=prot_C-linearis_contig82.16029.1|Name=mRNA_C-linearis_contig82.16029.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=190bp
MEASAEEEYVKTSTGDFVFKKAHVHGSQNLYLKGKSIIMPGAIIRGELQA
IRIGRYCFIGEDTVIRPAYRQAIEQEGSNLKCRFTPLSVGNHTYIGKNCV
VESAGIGCTVRIEDGCVLGRNSFVRDNCHLLAGTVLPEGAVVPPFTVLQG
CPAKMVSILHESTASVWAEDAVSLYETFEPSRVSLAANV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like_sf