prot_C-linearis_contig82.16018.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16018.1
Unique Nameprot_C-linearis_contig82.16018.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length448
Homology
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: D7FIH9_ECTSI (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI)

HSP 1 Score: 876 bits (2263), Expect = 0.000e+0
Identity = 429/447 (95.97%), Postives = 443/447 (99.11%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT 447
            MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRAL +VKLDKMFAKPL+GALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGL+VTP G SFLS GDDGMVKQW+LGVASDL++TPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCL+ASTGSSREVCLYDTRA+VPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHR+GRSREVYHTKRMQRVFCVNFSADARFV+TGSDDTNLRIWKANASEKLGKVVPREARKQEYR+SLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDK+RRKVDNRIKHSKAGTVETVPERKKK++KELT
Sbjct:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT 447          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A836C9W7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W7_9STRA)

HSP 1 Score: 622 bits (1603), Expect = 1.600e-220
Identity = 303/447 (67.79%), Postives = 361/447 (80.76%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT 447
            MK+KTISR+EE YTRDCK D +++HRN DP LHPFEKAREY RAL A KLDKMFAKP IGALDGH DGVFC+A+S +NLVQFLSGACDGE+R+WDLSRR+CVW+A  H GFVRG+AVTP G SFLS GDDG+VK+WDL +ASDL + P PTA W GK  GF++LDHHW DA FATA D+V+LWD  RAEPT +++WGAD+ N VRFNPAERCL+ASTGS R   LYD RA+ P+RKV L+MRSN VAWNP+ P  F  A ED   YTFD+R L  AL++HKDHV AVM V+FSPTG+E A+  YDRT+R+F  R GRSREVYHT+RMQR FCV +SADAR+V++GSDDT +RIWKA ASE+LG +VPREAR+  Y ++LK+RY  MP+VRRIAKHRHVPR V+ AA AE VQRDK +RK DN  +H+K G    VPER+++VI E T
Sbjct:    1 MKIKTISRLEEHYTRDCKTDVVKIHRNLDPKLHPFEKAREYGRALQATKLDKMFAKPFIGALDGHTDGVFCTATSPKNLVQFLSGACDGEVRVWDLSRRACVWKAAAHTGFVRGVAVTPDGRSFLSAGDDGLVKRWDLAIASDLEERPRPTAQWTGKM-GFRALDHHWGDATFATASDAVELWDAERAEPTHAFRWGADAVNSVRFNPAERCLLASTGSDRGAALYDARAAAPLRKVFLRMRSNGVAWNPRVPAQFALACEDHCAYTFDVRRLGAALVVHKDHVGAVMAVAFSPTGRELATAGYDRTLRIFGARDGRSREVYHTQRMQRAFCVAYSADARYVLSGSDDTCVRIWKARASERLGAIVPREARRLRYLDTLKRRYADMPDVRRIAKHRHVPRAVRGAARAEGVQRDKAKRKADNVRRHAKDGGDAPVPERRRRVIAEQT 446          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A024UAB8_9STRA (Sof1 domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAB8_9STRA)

HSP 1 Score: 553 bits (1424), Expect = 5.620e-193
Identity = 273/469 (58.21%), Postives = 348/469 (74.20%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQR-----------------------VFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 446
            MKVKTISRVE+++T++   DR ++HRN DP LHPFE+ REYTRAL AVKLDK+FAKP +GALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL V P G +F S  +D  +KQW + +A++   +PEP  T+ GK   F  +DHHW++  FAT    V +WDH+R++P   Y WGADS   V+FNPAE  L+ASTGS R V LYDTR +  MRK+V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  RS +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS  LGK+ PRE +K EY ++LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++  ++++ +K+ N  KHSK G V  V  RKK VI+++
Sbjct:    1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKE-SFMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGGLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 467          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A418B2S4_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2S4_9STRA)

HSP 1 Score: 553 bits (1424), Expect = 3.520e-188
Identity = 273/469 (58.21%), Postives = 348/469 (74.20%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQR-----------------------VFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 446
            MKVKTISRVE+++T++   DR ++HRN DP LHPFE+ REYTRAL AVKLDK+FAKP +GALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL V P G +F S  +D  +KQW + +A++   +PEP  T+ GK   F  +DHHW++  FAT    V +WDH+R++P   Y WGADS   V+FNPAE  L+ASTGS R V LYDTR +  MRK+V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  RS +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS  LGK+ PRE +K EY ++LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++  ++++ +K+ N  KHSK G V  V  RKK VI+++
Sbjct:  335 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKE-SFMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGWLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 801          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A482SJF6_9ARCH (Sof1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJF6_9ARCH)

HSP 1 Score: 533 bits (1373), Expect = 1.430e-185
Identity = 262/446 (58.74%), Postives = 332/446 (74.44%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 446
            MK+KTISR EE Y R  K D ++VHRNRDP +HPFE+AREY RA+ A KLDK+FAKP +GALDGH DGV+C +S R +LV F+SG+CDGE+R+WDLS + CVW A+ H+GFVRG+A    G +F S GDD ++K W L    +      P    +  S    S+DHHW D++FAT+GD V +WD +RA+P  +Y+WGADS  CVR+NPAE CL+ASTG+ R VCLYD R+S+PMRK+V+ M +N VAWNP+EPMNF  A+ED NLYTFD+R L+ ALMIHKDHV AVMDV++SPTG+EF S SYDRTVR+F   SG+SRE YHTKRMQRVFC  FSADA +V++GSDDTN+RIW++ AS+       R  RK++Y  SLKKR+ HMPE++R+   + +P+ ++KA     VQR  Q RK +NRIKHSK G+V    ERKK VIKEL
Sbjct:    1 MKIKTISRTEEDYVRKSKLDIVKVHRNRDPVVHPFERAREYARAVVATKLDKIFAKPFVGALDGHKDGVYCMSSVRSHLVPFISGSCDGELRVWDLSTKHCVWHAIAHEGFVRGVAPDVAGNAFYSCGDDKVIKLWALQHQLEEEGEVSPLNV-IHSSHSMTSIDHHWVDSQFATSGDVVSIWDGTRAQPINTYKWGADSVLCVRYNPAEACLLASTGNDRSVCLYDLRSSLPMRKMVMAMNANKVAWNPREPMNFTLASEDYNLYTFDMRKLDHALMIHKDHVGAVMDVAYSPTGREFVSASYDRTVRIFNVTSGKSREAYHTKRMQRVFCSAFSADAEYVLSGSDDTNVRIWRSVASKSGAVDSGRAERKKQYMQSLKKRFAHMPEIKRMNSDKKLPKAIRKAKGIMHVQRLSQHRKTENRIKHSKEGSVILPTERKKAVIKEL 445          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: M4C0L6_HYAAE (DDB1- and CUL4-associated factor 13 n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4C0L6_HYAAE)

HSP 1 Score: 527 bits (1357), Expect = 3.010e-183
Identity = 262/446 (58.74%), Postives = 331/446 (74.22%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 446
            M+V+TISRVE+ +T++ + D+L+V RN DP+LHPFE+ REYTRAL AVKL++MFAKP IGALDGH DGV   A+S  +LV  +SGA DGE+R+WDL RR CVW   GH+GFVRGLAVTP G +F S  +D  VKQW L V S+    P   AT+  K   F  +DHHW+   FAT G  V +WD SR+ PT  + WGADS N V FNPAE  L+ASTGS R + LYD R +  MRK+V++MRSNA+AWNP EPMNF  ANE+ NLYTFD+R +N+A+M+HKDHVSAVMDV++SPTG+EF +GSYDRT+R+F  RS +SREVYHT+RMQR       AD+ FV++GSDDTN+R+WKA AS+KL KV PRE RK EY  SLK RY+H+ E+ RIAKHRHVP+ +KKAA A+R    + ++K+ NR  H+K G V     R+K V+KE+
Sbjct:    1 MRVQTISRVEKDFTQEVQSDKLKVFRNYDPALHPFERPREYTRALNAVKLERMFAKPFIGALDGHCDGVTALATSPSSLVPLVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLAVTPDGSTFYSCSEDKTVKQWALRVKSEDEDVPTALATFTSKE-PFLGIDHHWSQKMFATCGSKVQVWDPSRSTPTHEFAWGADSINSVHFNPAEASLLASTGSDRNITLYDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANENHNLYTFDMRKMNRAMMVHKDHVSAVMDVAYSPTGREFVAGSYDRTIRIFNVRSTKSREVYHTQRMQR-------ADSNFVLSGSDDTNIRVWKAEASKKLSKVGPRERRKIEYNESLKDRYQHLREISRIAKHRHVPKAIKKAAHAKREASSRDQKKMANRRAHAKEGAVPHTNIREKVVVKEM 438          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A6P4ZG13_BRABE (DDB1- and CUL4-associated factor 13 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZG13_BRABE)

HSP 1 Score: 499 bits (1284), Expect = 4.610e-172
Identity = 240/445 (53.93%), Postives = 315/445 (70.79%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKE 445
            MK+K +SR  + Y R+ K D  ++ RN DP+LHPFE AREYTRAL A KL+++FAKP +GALDGH DGV C A    +L   L+GACDGEI++W+L  R C      H GFVRG+ VTP   + LS+GDD  +K W L       +  EP  T +GKS  F  +DHHW DA FAT G +VD+WDH+RAEP  S+ WG DS NCVRFNP E+  +AS  + R + LYDTR S P+RKV+L MRSN +AWNP E   F  ANED NLY+FD+R L     IH DHV+AV+D+ +SPTG+EF SGS+D+T+R+FP   GRSREVYHTKRMQRVFC+ +S D +++++GSD+TN+RIWKA A+EK+GK+ PRE     Y + LK++++H P+VRRIA+HRHVP+ V       R+ +D +RRK +NRI+HSK G+++   ER+K V+ E
Sbjct:    1 MKIKVLSRNPDDYGRETKRDIQRLPRNYDPALHPFEAAREYTRALNATKLERVFAKPFVGALDGHRDGVNCMAKHPGSLSTLLTGACDGEIKIWNLGSRDCRRTIQAHTGFVRGMCVTPDHGNVLSIGDDKTIKMWSLTSPEAGEEEEEPVQTILGKS-IFTGIDHHWKDATFATCGQTVDIWDHARAEPLRSFSWGVDSLNCVRFNPIEKHYLASCAADRSIILYDTRGSSPLRKVILNMRSNVLAWNPMEAFVFTVANEDHNLYSFDIRRLTSPFNIHMDHVNAVLDLDYSPTGREFVSGSFDKTIRIFPLEKGRSREVYHTKRMQRVFCIKWSLDNKYILSGSDETNVRIWKAKAAEKIGKLTPREESALTYSDKLKEKFQHHPQVRRIARHRHVPKEVYHLTRQTRIMKDSRRRKEENRIRHSKPGSIKKKREREKVVVAE 444          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: UPI00106B535B (DDB1- and CUL4-associated factor 13-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B535B)

HSP 1 Score: 486 bits (1251), Expect = 4.510e-167
Identity = 236/443 (53.27%), Postives = 314/443 (70.88%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVI 443
            MKVK +SR    Y R+CK D  ++ RN DPSLHPFE AREYTRAL A KL+++FAKP +G+LDGH DGV C A  +++L   LSG+C+GE++LW+L ++ C+     H GFVRGLAV P GE F+SVGDD ++K W     S  T++     T +GK+  F+ +DHHW D  +AT GD VD+W   R+EP  S+QWG D+ + V+FNP E  L+AST S R V LYD R + P+RK++++MRSN VAWNP E  NF  ANED+NLYT+D+R L+ A+ +H+DHV+AV+DV +SPTGQEF SGS+D+T+R+FP+  G SREVYHTKRMQRVFCV +S DA FV++GSD+ N+RIWKA AS KLG + PR+     Y   LK+RY+  P+V RI +HRHVP  + KAA  +R+    ++ + +NR  HS  G V  V ERKK ++
Sbjct:    1 MKVKVLSRNPADYIRECKSDIHKIPRNIDPSLHPFEGAREYTRALNAAKLERVFAKPFVGSLDGHTDGVNCMAKFQKSLSLLLSGSCNGEVKLWNLPKKECIRSYAAHSGFVRGLAVVPTGEIFISVGDDKLIKHWSWKQDSS-TKSSHLVHTIVGKT-MFQGVDHHWKDNVYATCGDQVDIWHEDRSEPVRSFQWGVDTVHSVKFNPVETNLLASTASDRGVVLYDIRGATPLRKLLMKMRSNTVAWNPMEAFNFTVANEDSNLYTYDMRRLDFAVSVHRDHVAAVLDVDYSPTGQEFVSGSFDKTIRIFPYNQGHSREVYHTKRMQRVFCVKWSPDAEFVLSGSDEMNVRIWKAEASAKLGPLAPRQKAALTYNKKLKERYKFHPQVLRILRHRHVPSAIYKAAREKRIMLQSRKTREENRRLHSAEGKVPYVAERKKHIV 441          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A7S0MFA3_9CRYP (DDB1- and CUL4-associated factor 13 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFA3_9CRYP)

HSP 1 Score: 485 bits (1248), Expect = 1.580e-166
Identity = 242/444 (54.50%), Postives = 310/444 (69.82%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIK 444
            MKVK ++RVEE +TR+ KGD ++  RN DP LHPFE+AREYTRAL AVKLDK+FAKP + AL GH D V C A SR  L   +SG+CDGE+RLWDL   +  W    H GFVRG+A +P G++  S GDD  VK W      D +    P  T +G+   F  LDHHWT+   AT G  V +WDH R+EP  +  WG++S   VRFNPAER ++ASTGS R   L+D R++  +RK+V   RSN + WNP E  NFV ANED NLYTFD+R ++ AL +H DHVSAV+DV FSPTGQEF +GSYDRTVR+F H  G SRE+YH KRMQRV+ V F+ DAR+V++ SDD N+R+W+A ASE +  ++PRE R  EYR  LK+R++  PEVRRIA+HRH+PR V KA + + V +  ++RK DN  +HS+ G+V  VPERKK ++K
Sbjct:    9 MKVKVLNRVEEDFTRERKGDVVKTFRNPDPVLHPFERAREYTRALNAVKLDKVFAKPFVRALSGHRDAVTCMARSRVKLTDIISGSCDGELRLWDLCTGNSRWTTTAHSGFVRGIAFSPEGDTIWSCGDDKTVKMWQRDPDEDESAIVSPIHTILGQH-AFLGLDHHWTEPIVATCGVDVQIWDHQRSEPIHTLTWGSESVLSVRFNPAERQVLASTGSDRSTVLHDLRSATAIRKLVTAKRSNKMCWNPMEAFNFVLANEDNNLYTFDMRKMDCALCVHMDHVSAVLDVDFSPTGQEFVTGSYDRTVRIFRHNEGHSREIYHGKRMQRVWSVLFTGDARWVLSASDDFNVRLWRAKASEGVKPLLPREQRGHEYRERLKERFKEAPEVRRIARHRHLPRAVLKAGKLKGVIKQSKKRKEDNARRHSRPGSVPHVPERKKHIVK 451          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: W1P0N3_AMBTC (DDB1- and CUL4-associated factor 13 n=3 Tax=Magnoliopsida TaxID=3398 RepID=W1P0N3_AMBTC)

HSP 1 Score: 483 bits (1244), Expect = 6.620e-166
Identity = 235/452 (51.99%), Postives = 324/452 (71.68%), Query Frame = 0
Query:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLG--VASDLTQTPE----PTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 446
            MKVK ISR  E +TR+   D  +V RN DP LH  EKA EY RAL A KL+K+FAKP +GA+DGH D + C A +   L    SG+ DG+IRLWD+S RS V + VGH+G VRGLA +  G   +S G+D  V+ W +     +DL    E    P A ++ K+  F+++DH W    FAT G  VD+WDHSR+EP  S+ WG+D+   VRFNPA + ++A++ S R + LYD R ++P +K+V+Q R+NA+AWNP+EPMNF  ANED N Y++D+RN+ QA  +H+DHVSAVMD+ +SPTG+EF +GSYDRTVR+F + +G SRE+YHTKRMQRVFCV FS DA +V++GSDDTNLR+WKA ASE+LG ++PRE +KQEY +++K+R++H+PEV+RI +HRH+P+ + KAA   R   D +++K + +  HS  GTV TVP RK++++ E+
Sbjct:    1 MKVKVISRSAEEFTRERSQDLQRVFRNFDPKLHAQEKAVEYARALNAAKLEKIFAKPFLGAMDGHVDAISCMAKNPNYLKGIFSGSMDGDIRLWDISSRSTVQQFVGHKGAVRGLAASTDGSILVSCGNDCTVRLWSIPGPKIADLDDASENASNPLAVYVSKN-AFRAVDHQWDGNLFATVGAQVDIWDHSRSEPVTSFAWGSDTVVSVRFNPAHKDILATSASDRSITLYDLRMALPSKKIVMQTRTNAIAWNPREPMNFSLANEDCNCYSYDMRNMEQAKCVHRDHVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNAGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERKKQEYLDAVKERFKHLPEVKRIVRHRHLPKPIYKAASLRRTMADAEKKKEERKRAHSAPGTVVTVPLRKRRIVSEI 451          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH9_ECTSI0.000e+095.97Sof1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C9W7_9STRA1.600e-22067.79WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A024UAB8_9STRA5.620e-19358.21Sof1 domain-containing protein n=11 Tax=Aphanomyce... [more]
A0A418B2S4_9STRA3.520e-18858.21SAM domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A482SJF6_9ARCH1.430e-18558.74Sof1 domain-containing protein n=1 Tax=archaeon Ta... [more]
M4C0L6_HYAAE3.010e-18358.74DDB1- and CUL4-associated factor 13 n=18 Tax=Peron... [more]
A0A6P4ZG13_BRABE4.610e-17253.93DDB1- and CUL4-associated factor 13 n=3 Tax=Branch... [more]
UPI00106B535B4.510e-16753.27DDB1- and CUL4-associated factor 13-like n=1 Tax=D... [more]
A0A7S0MFA3_9CRYP1.580e-16654.50DDB1- and CUL4-associated factor 13 (Fragment) n=1... [more]
W1P0N3_AMBTC6.620e-16651.99DDB1- and CUL4-associated factor 13 n=3 Tax=Magnol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 314..355
e-value: 0.0083
score: 25.3
coord: 234..269
e-value: 220.0
score: 2.3
coord: 98..137
e-value: 4.8E-5
score: 32.8
coord: 147..184
e-value: 26.0
score: 8.1
coord: 273..312
e-value: 9.2E-6
score: 35.1
coord: 189..227
e-value: 2.2
score: 14.8
coord: 55..95
e-value: 0.019
score: 24.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 60..95
e-value: 0.099
score: 13.5
coord: 101..137
e-value: 0.0029
score: 18.4
coord: 326..355
e-value: 4.1E-5
score: 24.3
coord: 278..311
e-value: 1.2E-4
score: 22.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 62..104
score: 9.539
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 280..321
score: 11.411
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 323..364
score: 11.511
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 105..146
score: 11.344
IPR007287Sof1-like proteinPFAMPF04158Sof1coord: 356..442
e-value: 2.4E-29
score: 101.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 144..434
e-value: 4.5E-37
score: 129.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 47..143
e-value: 1.0E-17
score: 65.8
NoneNo IPR availablePANTHERPTHR22851U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINcoord: 1..445
NoneNo IPR availablePANTHERPTHR22851:SF0DDB1- AND CUL4-ASSOCIATED FACTOR 13coord: 1..445
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 62..364
score: 28.95
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 54..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:668159..673617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16018.1mRNA_C-linearis_contig82.16018.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 668106..674531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16018.1 ID=prot_C-linearis_contig82.16018.1|Name=mRNA_C-linearis_contig82.16018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=448bp
MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKL
DKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRS
CVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEP
TATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADS
NNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNP
QEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFA
SGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTN
LRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPR
IVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR007287Sof1
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf