mRNA_C-linearis_contig82.16018.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig82.16018.1
Unique NamemRNA_C-linearis_contig82.16018.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: D7FIH9_ECTSI (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI)

HSP 1 Score: 877 bits (2267), Expect = 5.670e-316
Identity = 429/447 (95.97%), Postives = 443/447 (99.11%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT 1394
            MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRAL +VKLDKMFAKPL+GALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGL+VTP G SFLS GDDGMVKQW+LGVASDL++TPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCL+ASTGSSREVCLYDTRA+VPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHR+GRSREVYHTKRMQRVFCVNFSADARFV+TGSDDTNLRIWKANASEKLGKVVPREARKQEYR+SLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDK+RRKVDNRIKHSKAGTVETVPERKKK++KELT
Sbjct:    1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT 447          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A836C9W7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W7_9STRA)

HSP 1 Score: 623 bits (1607), Expect = 4.390e-216
Identity = 303/447 (67.79%), Postives = 361/447 (80.76%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT 1394
            MK+KTISR+EE YTRDCK D +++HRN DP LHPFEKAREY RAL A KLDKMFAKP IGALDGH DGVFC+A+S +NLVQFLSGACDGE+R+WDLSRR+CVW+A  H GFVRG+AVTP G SFLS GDDG+VK+WDL +ASDL + P PTA W GK  GF++LDHHW DA FATA D+V+LWD  RAEPT +++WGAD+ N VRFNPAERCL+ASTGS R   LYD RA+ P+RKV L+MRSN VAWNP+ P  F  A ED   YTFD+R L  AL++HKDHV AVM V+FSPTG+E A+  YDRT+R+F  R GRSREVYHT+RMQR FCV +SADAR+V++GSDDT +RIWKA ASE+LG +VPREAR+  Y ++LK+RY  MP+VRRIAKHRHVPR V+ AA AE VQRDK +RK DN  +H+K G    VPER+++VI E T
Sbjct:    1 MKIKTISRLEEHYTRDCKTDVVKIHRNLDPKLHPFEKAREYGRALQATKLDKMFAKPFIGALDGHTDGVFCTATSPKNLVQFLSGACDGEVRVWDLSRRACVWKAAAHTGFVRGVAVTPDGRSFLSAGDDGLVKRWDLAIASDLEERPRPTAQWTGKM-GFRALDHHWGDATFATASDAVELWDAERAEPTHAFRWGADAVNSVRFNPAERCLLASTGSDRGAALYDARAAAPLRKVFLRMRSNGVAWNPRVPAQFALACEDHCAYTFDVRRLGAALVVHKDHVGAVMAVAFSPTGRELATAGYDRTLRIFGARDGRSREVYHTQRMQRAFCVAYSADARYVLSGSDDTCVRIWKARASERLGAIVPREARRLRYLDTLKRRYADMPDVRRIAKHRHVPRAVRGAARAEGVQRDKAKRKADNVRRHAKDGGDAPVPERRRRVIAEQT 446          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A024UAB8_9STRA (Sof1 domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAB8_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 1.100e-188
Identity = 273/469 (58.21%), Postives = 348/469 (74.20%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQR-----------------------VFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
            MKVKTISRVE+++T++   DR ++HRN DP LHPFE+ REYTRAL AVKLDK+FAKP +GALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL V P G +F S  +D  +KQW + +A++   +PEP  T+ GK   F  +DHHW++  FAT    V +WDH+R++P   Y WGADS   V+FNPAE  L+ASTGS R V LYDTR +  MRK+V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  RS +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS  LGK+ PRE +K EY ++LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++  ++++ +K+ N  KHSK G V  V  RKK VI+++
Sbjct:    1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKE-SFMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGGLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 467          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A418B2S4_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2S4_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 6.980e-184
Identity = 273/469 (58.21%), Postives = 348/469 (74.20%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQR-----------------------VFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
            MKVKTISRVE+++T++   DR ++HRN DP LHPFE+ REYTRAL AVKLDK+FAKP +GALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL V P G +F S  +D  +KQW + +A++   +PEP  T+ GK   F  +DHHW++  FAT    V +WDH+R++P   Y WGADS   V+FNPAE  L+ASTGS R V LYDTR +  MRK+V++MR+NA+AWNP EP +F  ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  RS +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS  LGK+ PRE +K EY ++LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++  ++++ +K+ N  KHSK G V  V  RKK VI+++
Sbjct:  335 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKE-SFMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGWLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 801          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A482SJF6_9ARCH (Sof1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJF6_9ARCH)

HSP 1 Score: 535 bits (1377), Expect = 2.510e-181
Identity = 262/446 (58.74%), Postives = 332/446 (74.44%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
            MK+KTISR EE Y R  K D ++VHRNRDP +HPFE+AREY RA+ A KLDK+FAKP +GALDGH DGV+C +S R +LV F+SG+CDGE+R+WDLS + CVW A+ H+GFVRG+A    G +F S GDD ++K W L    +      P    +  S    S+DHHW D++FAT+GD V +WD +RA+P  +Y+WGADS  CVR+NPAE CL+ASTG+ R VCLYD R+S+PMRK+V+ M +N VAWNP+EPMNF  A+ED NLYTFD+R L+ ALMIHKDHV AVMDV++SPTG+EF S SYDRTVR+F   SG+SRE YHTKRMQRVFC  FSADA +V++GSDDTN+RIW++ AS+       R  RK++Y  SLKKR+ HMPE++R+   + +P+ ++KA     VQR  Q RK +NRIKHSK G+V    ERKK VIKEL
Sbjct:    1 MKIKTISRTEEDYVRKSKLDIVKVHRNRDPVVHPFERAREYARAVVATKLDKIFAKPFVGALDGHKDGVYCMSSVRSHLVPFISGSCDGELRVWDLSTKHCVWHAIAHEGFVRGVAPDVAGNAFYSCGDDKVIKLWALQHQLEEEGEVSPLNV-IHSSHSMTSIDHHWVDSQFATSGDVVSIWDGTRAQPINTYKWGADSVLCVRYNPAEACLLASTGNDRSVCLYDLRSSLPMRKMVMAMNANKVAWNPREPMNFTLASEDYNLYTFDMRKLDHALMIHKDHVGAVMDVAYSPTGREFVSASYDRTVRIFNVTSGKSREAYHTKRMQRVFCSAFSADAEYVLSGSDDTNVRIWRSVASKSGAVDSGRAERKKQYMQSLKKRFAHMPEIKRMNSDKKLPKAIRKAKGIMHVQRLSQHRKTENRIKHSKEGSVILPTERKKAVIKEL 445          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: M4C0L6_HYAAE (DDB1- and CUL4-associated factor 13 n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4C0L6_HYAAE)

HSP 1 Score: 528 bits (1361), Expect = 5.080e-179
Identity = 262/446 (58.74%), Postives = 331/446 (74.22%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
            M+V+TISRVE+ +T++ + D+L+V RN DP+LHPFE+ REYTRAL AVKL++MFAKP IGALDGH DGV   A+S  +LV  +SGA DGE+R+WDL RR CVW   GH+GFVRGLAVTP G +F S  +D  VKQW L V S+    P   AT+  K   F  +DHHW+   FAT G  V +WD SR+ PT  + WGADS N V FNPAE  L+ASTGS R + LYD R +  MRK+V++MRSNA+AWNP EPMNF  ANE+ NLYTFD+R +N+A+M+HKDHVSAVMDV++SPTG+EF +GSYDRT+R+F  RS +SREVYHT+RMQR       AD+ FV++GSDDTN+R+WKA AS+KL KV PRE RK EY  SLK RY+H+ E+ RIAKHRHVP+ +KKAA A+R    + ++K+ NR  H+K G V     R+K V+KE+
Sbjct:    1 MRVQTISRVEKDFTQEVQSDKLKVFRNYDPALHPFERPREYTRALNAVKLERMFAKPFIGALDGHCDGVTALATSPSSLVPLVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLAVTPDGSTFYSCSEDKTVKQWALRVKSEDEDVPTALATFTSKE-PFLGIDHHWSQKMFATCGSKVQVWDPSRSTPTHEFAWGADSINSVHFNPAEASLLASTGSDRNITLYDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANENHNLYTFDMRKMNRAMMVHKDHVSAVMDVAYSPTGREFVAGSYDRTIRIFNVRSTKSREVYHTQRMQR-------ADSNFVLSGSDDTNIRVWKAEASKKLSKVGPRERRKIEYNESLKDRYQHLREISRIAKHRHVPKAIKKAAHAKREASSRDQKKMANRRAHAKEGAVPHTNIREKVVVKEM 438          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A6P4ZG13_BRABE (DDB1- and CUL4-associated factor 13 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZG13_BRABE)

HSP 1 Score: 501 bits (1289), Expect = 4.610e-168
Identity = 240/445 (53.93%), Postives = 315/445 (70.79%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKE 1388
            MK+K +SR  + Y R+ K D  ++ RN DP+LHPFE AREYTRAL A KL+++FAKP +GALDGH DGV C A    +L   L+GACDGEI++W+L  R C      H GFVRG+ VTP   + LS+GDD  +K W L       +  EP  T +GKS  F  +DHHW DA FAT G +VD+WDH+RAEP  S+ WG DS NCVRFNP E+  +AS  + R + LYDTR S P+RKV+L MRSN +AWNP E   F  ANED NLY+FD+R L     IH DHV+AV+D+ +SPTG+EF SGS+D+T+R+FP   GRSREVYHTKRMQRVFC+ +S D +++++GSD+TN+RIWKA A+EK+GK+ PRE     Y + LK++++H P+VRRIA+HRHVP+ V       R+ +D +RRK +NRI+HSK G+++   ER+K V+ E
Sbjct:    1 MKIKVLSRNPDDYGRETKRDIQRLPRNYDPALHPFEAAREYTRALNATKLERVFAKPFVGALDGHRDGVNCMAKHPGSLSTLLTGACDGEIKIWNLGSRDCRRTIQAHTGFVRGMCVTPDHGNVLSIGDDKTIKMWSLTSPEAGEEEEEPVQTILGKS-IFTGIDHHWKDATFATCGQTVDIWDHARAEPLRSFSWGVDSLNCVRFNPIEKHYLASCAADRSIILYDTRGSSPLRKVILNMRSNVLAWNPMEAFVFTVANEDHNLYSFDIRRLTSPFNIHMDHVNAVLDLDYSPTGREFVSGSFDKTIRIFPLEKGRSREVYHTKRMQRVFCIKWSLDNKYILSGSDETNVRIWKAKAAEKIGKLTPREESALTYSDKLKEKFQHHPQVRRIARHRHVPKEVYHLTRQTRIMKDSRRRKEENRIRHSKPGSIKKKREREKVVVAE 444          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: UPI00106B535B (DDB1- and CUL4-associated factor 13-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B535B)

HSP 1 Score: 488 bits (1255), Expect = 5.830e-163
Identity = 236/443 (53.27%), Postives = 314/443 (70.88%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVI 1382
            MKVK +SR    Y R+CK D  ++ RN DPSLHPFE AREYTRAL A KL+++FAKP +G+LDGH DGV C A  +++L   LSG+C+GE++LW+L ++ C+     H GFVRGLAV P GE F+SVGDD ++K W     S  T++     T +GK+  F+ +DHHW D  +AT GD VD+W   R+EP  S+QWG D+ + V+FNP E  L+AST S R V LYD R + P+RK++++MRSN VAWNP E  NF  ANED+NLYT+D+R L+ A+ +H+DHV+AV+DV +SPTGQEF SGS+D+T+R+FP+  G SREVYHTKRMQRVFCV +S DA FV++GSD+ N+RIWKA AS KLG + PR+     Y   LK+RY+  P+V RI +HRHVP  + KAA  +R+    ++ + +NR  HS  G V  V ERKK ++
Sbjct:    1 MKVKVLSRNPADYIRECKSDIHKIPRNIDPSLHPFEGAREYTRALNAAKLERVFAKPFVGSLDGHTDGVNCMAKFQKSLSLLLSGSCNGEVKLWNLPKKECIRSYAAHSGFVRGLAVVPTGEIFISVGDDKLIKHWSWKQDSS-TKSSHLVHTIVGKT-MFQGVDHHWKDNVYATCGDQVDIWHEDRSEPVRSFQWGVDTVHSVKFNPVETNLLASTASDRGVVLYDIRGATPLRKLLMKMRSNTVAWNPMEAFNFTVANEDSNLYTYDMRRLDFAVSVHRDHVAAVLDVDYSPTGQEFVSGSFDKTIRIFPYNQGHSREVYHTKRMQRVFCVKWSPDAEFVLSGSDEMNVRIWKAEASAKLGPLAPRQKAALTYNKKLKERYKFHPQVLRILRHRHVPSAIYKAAREKRIMLQSRKTREENRRLHSAEGKVPYVAERKKHIV 441          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A7S0MFA3_9CRYP (DDB1- and CUL4-associated factor 13 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFA3_9CRYP)

HSP 1 Score: 486 bits (1252), Expect = 2.030e-162
Identity = 242/444 (54.50%), Postives = 310/444 (69.82%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIK 1385
            MKVK ++RVEE +TR+ KGD ++  RN DP LHPFE+AREYTRAL AVKLDK+FAKP + AL GH D V C A SR  L   +SG+CDGE+RLWDL   +  W    H GFVRG+A +P G++  S GDD  VK W      D +    P  T +G+   F  LDHHWT+   AT G  V +WDH R+EP  +  WG++S   VRFNPAER ++ASTGS R   L+D R++  +RK+V   RSN + WNP E  NFV ANED NLYTFD+R ++ AL +H DHVSAV+DV FSPTGQEF +GSYDRTVR+F H  G SRE+YH KRMQRV+ V F+ DAR+V++ SDD N+R+W+A ASE +  ++PRE R  EYR  LK+R++  PEVRRIA+HRH+PR V KA + + V +  ++RK DN  +HS+ G+V  VPERKK ++K
Sbjct:    9 MKVKVLNRVEEDFTRERKGDVVKTFRNPDPVLHPFERAREYTRALNAVKLDKVFAKPFVRALSGHRDAVTCMARSRVKLTDIISGSCDGELRLWDLCTGNSRWTTTAHSGFVRGIAFSPEGDTIWSCGDDKTVKMWQRDPDEDESAIVSPIHTILGQH-AFLGLDHHWTEPIVATCGVDVQIWDHQRSEPIHTLTWGSESVLSVRFNPAERQVLASTGSDRSTVLHDLRSATAIRKLVTAKRSNKMCWNPMEAFNFVLANEDNNLYTFDMRKMDCALCVHMDHVSAVLDVDFSPTGQEFVTGSYDRTVRIFRHNEGHSREIYHGKRMQRVWSVLFTGDARWVLSASDDFNVRLWRAKASEGVKPLLPREQRGHEYRERLKERFKEAPEVRRIARHRHLPRAVLKAGKLKGVIKQSKKRKEDNARRHSRPGSVPHVPERKKHIVK 451          
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: W1P0N3_AMBTC (DDB1- and CUL4-associated factor 13 n=3 Tax=Magnoliopsida TaxID=3398 RepID=W1P0N3_AMBTC)

HSP 1 Score: 485 bits (1248), Expect = 8.400e-162
Identity = 235/452 (51.99%), Postives = 324/452 (71.68%), Query Frame = 3
Query:   54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLG--VASDLTQTPE----PTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
            MKVK ISR  E +TR+   D  +V RN DP LH  EKA EY RAL A KL+K+FAKP +GA+DGH D + C A +   L    SG+ DG+IRLWD+S RS V + VGH+G VRGLA +  G   +S G+D  V+ W +     +DL    E    P A ++ K+  F+++DH W    FAT G  VD+WDHSR+EP  S+ WG+D+   VRFNPA + ++A++ S R + LYD R ++P +K+V+Q R+NA+AWNP+EPMNF  ANED N Y++D+RN+ QA  +H+DHVSAVMD+ +SPTG+EF +GSYDRTVR+F + +G SRE+YHTKRMQRVFCV FS DA +V++GSDDTNLR+WKA ASE+LG ++PRE +KQEY +++K+R++H+PEV+RI +HRH+P+ + KAA   R   D +++K + +  HS  GTV TVP RK++++ E+
Sbjct:    1 MKVKVISRSAEEFTRERSQDLQRVFRNFDPKLHAQEKAVEYARALNAAKLEKIFAKPFLGAMDGHVDAISCMAKNPNYLKGIFSGSMDGDIRLWDISSRSTVQQFVGHKGAVRGLAASTDGSILVSCGNDCTVRLWSIPGPKIADLDDASENASNPLAVYVSKN-AFRAVDHQWDGNLFATVGAQVDIWDHSRSEPVTSFAWGSDTVVSVRFNPAHKDILATSASDRSITLYDLRMALPSKKIVMQTRTNAIAWNPREPMNFSLANEDCNCYSYDMRNMEQAKCVHRDHVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNAGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERKKQEYLDAVKERFKHLPEVKRIVRHRHLPKPIYKAASLRRTMADAEKKKEERKRAHSAPGTVVTVPLRKRRIVSEI 451          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH9_ECTSI5.670e-31695.97Sof1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C9W7_9STRA4.390e-21667.79WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A024UAB8_9STRA1.100e-18858.21Sof1 domain-containing protein n=11 Tax=Aphanomyce... [more]
A0A418B2S4_9STRA6.980e-18458.21SAM domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A482SJF6_9ARCH2.510e-18158.74Sof1 domain-containing protein n=1 Tax=archaeon Ta... [more]
M4C0L6_HYAAE5.080e-17958.74DDB1- and CUL4-associated factor 13 n=18 Tax=Peron... [more]
A0A6P4ZG13_BRABE4.610e-16853.93DDB1- and CUL4-associated factor 13 n=3 Tax=Branch... [more]
UPI00106B535B5.830e-16353.27DDB1- and CUL4-associated factor 13-like n=1 Tax=D... [more]
A0A7S0MFA3_9CRYP2.030e-16254.50DDB1- and CUL4-associated factor 13 (Fragment) n=1... [more]
W1P0N3_AMBTC8.400e-16251.99DDB1- and CUL4-associated factor 13 n=3 Tax=Magnol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:668106..674531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score877.9
Seed ortholog evalue2.1e-252
Seed eggNOG ortholog2880.D7FIH9
Preferred nameDCAF13
KEGG koko:K11806
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006464,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015630,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0030054,GO:0030331,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031461,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035257,GO:0035258,GO:0036211,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043687,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0051427,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGsKOG0268@1,KOG0268@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-28_000340.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko04121
Exons10
Model size2311
Cds size1344
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16018.1prot_C-linearis_contig82.16018.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig82 668159..673617 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930615.7834532-UTR-C-linearis_contig82:668105..6681581622930615.7834532-UTR-C-linearis_contig82:668105..668158Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 668106..668158 +
1690881160.898937-UTR-C-linearis_contig82:668105..6681581690881160.898937-UTR-C-linearis_contig82:668105..668158Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 668106..668158 +
1622930616.0282388-UTR-C-linearis_contig82:673617..6745311622930616.0282388-UTR-C-linearis_contig82:673617..674531Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 673618..674531 +
1690881161.0163214-UTR-C-linearis_contig82:673617..6745311690881161.0163214-UTR-C-linearis_contig82:673617..674531Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 673618..674531 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930615.8128402-CDS-C-linearis_contig82:668158..6682691622930615.8128402-CDS-C-linearis_contig82:668158..668269Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 668159..668269 +
1690881160.9105887-CDS-C-linearis_contig82:668158..6682691690881160.9105887-CDS-C-linearis_contig82:668158..668269Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 668159..668269 +
1622930615.8330202-CDS-C-linearis_contig82:668691..6688331622930615.8330202-CDS-C-linearis_contig82:668691..668833Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 668692..668833 +
1690881160.9223962-CDS-C-linearis_contig82:668691..6688331690881160.9223962-CDS-C-linearis_contig82:668691..668833Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 668692..668833 +
1622930615.8524604-CDS-C-linearis_contig82:669253..6694381622930615.8524604-CDS-C-linearis_contig82:669253..669438Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 669254..669438 +
1690881160.931728-CDS-C-linearis_contig82:669253..6694381690881160.931728-CDS-C-linearis_contig82:669253..669438Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 669254..669438 +
1622930615.87337-CDS-C-linearis_contig82:670030..6702061622930615.87337-CDS-C-linearis_contig82:670030..670206Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 670031..670206 +
1690881160.946027-CDS-C-linearis_contig82:670030..6702061690881160.946027-CDS-C-linearis_contig82:670030..670206Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 670031..670206 +
1622930615.8938553-CDS-C-linearis_contig82:670550..6706441622930615.8938553-CDS-C-linearis_contig82:670550..670644Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 670551..670644 +
1690881160.9599195-CDS-C-linearis_contig82:670550..6706441690881160.9599195-CDS-C-linearis_contig82:670550..670644Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 670551..670644 +
1622930615.915132-CDS-C-linearis_contig82:671138..6712551622930615.915132-CDS-C-linearis_contig82:671138..671255Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 671139..671255 +
1690881160.96944-CDS-C-linearis_contig82:671138..6712551690881160.96944-CDS-C-linearis_contig82:671138..671255Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 671139..671255 +
1622930615.9350193-CDS-C-linearis_contig82:671629..6718231622930615.9350193-CDS-C-linearis_contig82:671629..671823Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 671630..671823 +
1690881160.9787202-CDS-C-linearis_contig82:671629..6718231690881160.9787202-CDS-C-linearis_contig82:671629..671823Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 671630..671823 +
1622930615.9648418-CDS-C-linearis_contig82:672355..6724811622930615.9648418-CDS-C-linearis_contig82:672355..672481Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 672356..672481 +
1690881160.9882329-CDS-C-linearis_contig82:672355..6724811690881160.9882329-CDS-C-linearis_contig82:672355..672481Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 672356..672481 +
1622930615.986622-CDS-C-linearis_contig82:673137..6732491622930615.986622-CDS-C-linearis_contig82:673137..673249Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 673138..673249 +
1690881160.9969409-CDS-C-linearis_contig82:673137..6732491690881160.9969409-CDS-C-linearis_contig82:673137..673249Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 673138..673249 +
1622930616.010364-CDS-C-linearis_contig82:673530..6736171622930616.010364-CDS-C-linearis_contig82:673530..673617Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 673531..673617 +
1690881161.0057502-CDS-C-linearis_contig82:673530..6736171690881161.0057502-CDS-C-linearis_contig82:673530..673617Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 673531..673617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig82.16018.1

>prot_C-linearis_contig82.16018.1 ID=prot_C-linearis_contig82.16018.1|Name=mRNA_C-linearis_contig82.16018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=448bp
MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKL
DKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRS
CVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEP
TATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADS
NNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNP
QEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFA
SGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTN
LRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPR
IVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT*
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mRNA from alignment at C-linearis_contig82:668106..674531+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig82.16018.1 ID=mRNA_C-linearis_contig82.16018.1|Name=mRNA_C-linearis_contig82.16018.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6426bp|location=Sequence derived from alignment at C-linearis_contig82:668106..674531+ (Chordaria linearis ClinC8C monoicous)
CGCCCGCCGGGGGTCCGAGACGCAGAGACGGAGAGAGCACCAAAGGCGGG ATCATGAAGGTCAAGACTATAAGCCGCGTGGAGGAGTCCTACACTCGAGA CTGCAAAGGCGACCGCCTCCAAGTGCACCGAAATCGCGATCCCTCCCTCC ATCCTTTTGAGAAGGTGTGTGGTGGTTGTGCCGCATCCTCGGTCTTGACC TCCCTTAGCGCCCTTACCCCTCCCCTGTCTACGCACAGTGGCGATCGATT GAGCCCACAGGGTGATTTTACGTTCTAGGCTAGGTAAAGAGGGTCGCCGG GTTCGGAGTCGGTTGGAAACATGGCATTTTTCACGCTCGTGGCGAAGGTC GATGCCTTGTGTGTATTTTTGCTGGCCCCCGGGCTTGGAGATTTTGAGTT GAGACAGCCAGTGGAGCGCAAGGTGTGTGGTACATACCACAGCCGCCTAC GATATTGGACCCAAGTATGCGCATGCGTGTTGCGCATGCGCAGGACGACC TCCCTCTCATATGTTGGTGGTGTTCAATCGCATTTTTACGTTACCGCCCC TCTTTATCTCAATAACGCGTTGCACACCTTCCGAAGGCGAGAGAGTACAC CCGAGCACTGACGGCGGTGAAGCTCGACAAGATGTTCGCTAAGCCGTTGA TCGGAGCGTTGGATGGGCACGGGGATGGTGTTTTCTGCTCAGCATCAAGC AGGAGAAATCTTGTTCAGTTTTTGTCAGGTGCGCCGTTTCTGCTGTAGAC CACAGCTTCTGGTCCAACACTCGACAACCCGGCGTGTCAGGTTCAACCCC AACTCTTCCTGTAGACTGCCGGCGTAGATCCTGAGTCGTTCTTACTCGTG TACGCCGGCATGTAGTGGTACACTGACCCGCAGAAGAAATGCCATGTACA GGCAGTTCTAAGTGGAGTTGAAAATCGCGTACAGCAGCTGGGTGTCCAAG CCGAAAGAGGCTGGGGGTGCTCCGCCGCATCCATTTTGTGATATACCACC GGTGTGCGACGCCGAACCATCAACGCGATGTACTGGTATTATAGTCTACA GATGCAGTGTTTATACGCCCACAAACGCCCGAAAAGTTCACACACACGCA CACATCGCATTTTTTTTTATGTTGGACTGCTGTTGTGCGTGCACACAGGT GCGTGTGACGGGGAGATCCGGTTGTGGGACCTGTCCCGCCGCAGCTGCGT GTGGCGGGCGGTGGGCCACCAGGGCTTCGTCCGAGGGCTGGCGGTCACGC CGGGCGGGGAGAGCTTCTTGTCCGTGGGGGACGACGGGATGGTGAAGCAG TGGGATCTCGGCGTGGCTTCTGATCTCACACAGGTGACTTGACTGCCTGC GCCGCGCGGCAGCGTGGAACGGCCAGATGTCTGCTCTGTCGGAGCGTGCT GTGTTGCGCTTTGGTTGGCGTTTCGTTCTCGGGTGGCAGGCGTGAAGGGG GCGGTACGATAGTGTCTGCTGGCGTTGGGGTGCGCTGTCGGTGGGTGGTT GCTGGCGGTTGCTGGGCTGGAACAAAGTGGTGAGGGCGGAGTCAAGGATA GATAAGTAAAGTGTCTGCAGACGCCCGCCTGTCTGGCTCTATCTGGCTCC AACACACAGACCTTTTCCTTTGCGCTGATAGATGTTGCCCGGCACCAAGT GCTACGACTTTGAGGCATCGGTGAGATGCCCCTGCAGTTTGCTGAATTTA GTTTTGACCGTGCGGTACAAGCCATGAGAAGATCTGCTCCTGGATCGTCC GAAGCTGCCAACGCGCTGGTGAACGCCAACCCAATTTACCAAGCGCATAC TGGGGTGCAACTCAAACAACCGCATTTATGTCCGCTGCGGTAATTGAAGC TGTTCGTCTCGCGTTCTTGTCGCGATGCCAATGCCATCCAAAACGACGCC CCCTTGACCCGATCTTCAACCTCAGACGCCGGAGCCCACGGCGACTTGGA TGGGCAAGTCGGGCGGTTTCAAGTCGCTCGACCATCACTGGACGGACGCC AAGTTCGCCACCGCGGGCGACTCGGTAGACCTGTGGGACCACAGCAGGGC AGAGCCCACGCTGTCGTACCAGTGGGGCGCCGACAGCAACAACTGCGTGA GGTGATCCTGGTCCATCCTCTCGGGCGCGGCCTTGTTTTTTTGTTTTTGC TTCCTCGTGGCTTGTTCGGCCACGCATGCGCATAGCTTTTATCTTGTCTA TGTACGGCTTTTTTCTTGTGTTTTTGGCTCTTGTGAGGACTGACTTCTGC CGTCATCACGTCGGCAATGTGTGGCAGTAGGTACTTCGGCCGGATGACTC CCGAGTAGTCGCAGGCCCGTTCGTGCTGGTGTTGCGTTCGGTGCGGGGCG CTTCATGCCCCCATGGGTTTGTCACGTCACTCCTTCTCCTGATGTTTTTC GTTGTTTGTTGGCGTCCCCTGTTTATGCCTGTGGCGTTACCGCAGGTTCA ACCCCGCGGAGAGGTGCTTGGTGGCGAGCACCGGTTCCAGCCGCGAAGTG TGCCTCTACGACACCAGGGCGTCCGTTCCGATGCGCAAGGTGCTCTTCGG GGGTGTATGATTAGGCTTCATCTCCGCTGTTCAGTTCGTCGACTTTCACG ACGTTTGTGCCACGGCTCGGCAGCATGCCGCCAAAATAATGGAATCGCGC GGCCCATGCCGTTAGTTTTCCGAACGCCAACCGGGGATTTCCTCGTTTCG TGTGTCGGGACACTGGAATTGGCCATATGTTTTGTGTTGTAGGGAGACGT CAAGGGAGATGCCAAGCGTTCTTGTCCGTCGTGACGCCGTTTGTTGGTTC ACGCTGCACGTAGTTTTTTTTTGCTTTCCTGTTGTTGAGCTCTCTCGAGA CAAGGTTAAAGGTCATGGGACAAGGCACGTGTTGATCGGCTGTTTCCCCC CGCAATGTCCGTTCTAACCTACCATGCCTCCCCTTTCCTTCGTCCCCAGA CTATTAATAGAACCTATCGATCACACCATTGCTCTCTGCCTCCAACCCTC GTACTTACGCTCCACTCCCCCCTTTTTTGGCAGGTTGTGTTGCAAATGCG ATCAAACGCTGTGGCGTGGAACCCTCAGGAGCCGATGAACTTCGTGTGCG CCAACGAAGACACGAACCTCTACACCTTTGACCTCAGGAACCTGAACCAG GTCAATATTCAGTTTTTAGTCGACGACCAAGAAGCCGACGACTGTTTTTT TTTATGCCGTCTTCGTCGTCGTCGTCGTCGTCGTCCGGCGAGCGTGCGGC TGATGGGGTCCCGTTTCAGAGCGCTGGCAACGAGGAAAGCCACGATCGCG GCTTGCATGTACTCGGCCCGACGAACGATCTAGAAGGGAAGACATGGTTC ACGGCGCTTCTCTGTTGTGTCTCATGGGAGTGCGTGCAAAACAGGAACCG GCGATGTGCTTTTTATTCTGCTTTTCTAAATGCTTCCCCAAGTAGCTTGA AACTTCCCTCCTCCCCTCACCCTCACCCTCACCTCTTCCGTGACCGCGCC CACTCGCCTCCAACCCCCGCCCAGGCTTTGATGATCCACAAGGACCACGT GTCTGCGGTGATGGATGTGTCCTTCTCGCCGACGGGGCAGGAGTTCGCGA GTGGGTCGTACGACCGCACCGTCCGGGTGTTCCCGCACCGTTCGGGGCGC TCGAGGGAGGTCTACCACACCAAGCGCATGCAGCGCGTGTTCTGCGTCAA CTTCAGCGCGGACGCTAGGTACGGTCAGAGACTTCCGCCCGGCGCTCAAG CTTTGCTTCCCGTTGGCTCAGAAGTACGCTGGCTTGTTTTCGGCGAAAGC AGCGTTTCTTGCCGTCGAGTGTGGGGGGCACCGCGGTGTGCGACGCATAG GTTCACAGCTCTTTTCTCGTTTGTTTCGGGGTCAGTCAAAAGAGAGTGCG TGTCGGAGGCATGGACCAGCGGCGCACCAGAACTTCTCGCCCTCCTCAGA CTCGCAACCCTCAGCTTCGGAGTCTAGCCTGTTTGCAAGGCGGTGCGGTG GCGTGTCATGAGATGCGGGCCTATTGTCGAGCCGCTGGCCAGTACAGCTT CGCCTCACACGATGCAGTCAAAGCATCGTCGTTGGACGTGAATGCCTTTT TCGTTTTTCATGACATTTGTTTTTTTTTTGCGAGGGTGCCGTTGCTTTCC CCTCGTCCTCGGCATCATAGCATGTGCATGTACCAGCTTGTGATCATGAG GTAACGCGACGAAGTATCTCCTGCCATGCCTGCCTTCCTCTGATGGATAG GTTTGTAGTGACGGGCAGCGACGACACGAACCTTCGAATATGGAAGGCCA ATGCGTCGGAGAAGCTTGGGAAGGTGGTGCCGAGGGAGGCTAGGAAGCAG GAATACAGGAACAGCCTCAAGAAGAGGTAAGGGCGTGAAGCTTCCTCGTG TTTGTGCGGTATAGATGCGCAGTTTCCCGTGGAACTCGCAGGTGATGGTG ATTTGGGCACTCTATCCAAGTCATGCTATCATATATCCTCGTGGGGTGCA TCAAGTGTTGCAAGTGTTGCTCCGTACCCATGCATGCGTAGGAGGCTTTC GTCTGGTTGCTTTGTGCCCGGTTTGGAAGGCTCGGCTGTTGGTCACAACA GGCGGGCGCGTAGTGTAGTCTAGCGCCGGCCGTGCAGTGCCGGAGTTTCC TGTGCTTTCTTCGGTGATGGTGTTGATGAGTATCTGCTGTGTTTGTGTGT GTGTGGTTTTTGTTGATTTTGCGAAACGAGTCGACAGCCGCGGCCATTTC TGGGCGATGATGTCGCCGCCGTGGCTCCCTCTTGCTGCACCTATGTTTTG TTCATTTTTCTATAAAAAGCCGGCGGTGTATTGTACGTCCAACCTGTAGA TAAATCGTTCCAGGGGGGCTGTTGTGCACGCACGCACCCACCCTTCCCTC ACCCTCCCAATGCGCCTTGTGTAGCCCAACCCTACCATCGGTCATACGTA GTCGTTGTGCTTCTGCCCCCCCGAACTCGCCACCTCACCCACCGATTTCC ACCATCTCGCCCTGTGTTGCGGCTGAGTACAGGTACGAGCACATGCCCGA AGTGCGGCGTATCGCGAAGCACCGACACGTGCCGAGGATCGTCAAGAAGG CGGCAGAGGCAGAGCGCGTGCAAAGGGACAAGCAGCGCCGGAAGGTGAGA GAGAGAGAGAGAGCTCCGGCTGTCGCGTACCGTACCATGTATTGGAGCGT GGAGCGTGGTCGTTTGGATGGCTTTCTATCGGTCGTCGGGGAAACACGGC CCTGTAGGCCAGGAAGCGTTCGTGGCAGCGCCTGTGGTGGGAATGCTGAA AAGCGCCCACCCTTTTCGGCGTGCATTCCTTTTTCTCGGCACGGTTGCGC ACAGCAGTATGGCTTTCTTGTGTTTGGGTTTCTCGCTTGCTCCACTACCC TATTCGCCCTCCCTCCGCATGACAGGTCGACAACCGCATCAAACACAGCA AGGCCGGGACCGTGGAGACGGTGCCAGAACGGAAGAAGAAGGTCATCAAG GAGCTCACGTAGTGGTAGAGACGCGTGGACGTGGCGAGCCGAGTTGTCGA TTGCCGTCTAGTTTCTCCGTAGTACCAACAGCAGCACCGCTAGGTGTGCA CGAGAAGAGATGGCGCAGGTGCACAAGGTGCCTGGCTGGAACTTGTCCGT GATGCGCTCCTAGCCGTCCGCGAGAGGTATATCCCACCAAGAGTTGGCGC TCCGACAGCGAGCGGCTGGCGGTCGCTGTTGTCATTTCGTCGTTTCCTAC CCCACAGAGTGTGGTCAAGCGCCGACTAGTGAAACGACTAGTGAAGCCTC TAGAGAGCAGTAAGAGCCCTAGGGGTGCACAGGCCATGGGATCAGCGCGC GCTGGATGGTTTTGGCATTTAAAAGTGTGGGTACGGGTGCCCAAACCGAA AGAGGTGACTGGGAGGCGACTATCACTCAGACTACGGGAACCGTTGCGTG TCAGCTTGCTGGGGTGGCGGTGGCGTAGGGCACCTTCGGTACCGATGCGG GCGGCTGCAGAGGCCGATAGGGTGTTGGCTGGAGCCGACAGGAGAAGTTG GCATCTTCAGAAAACGACCTGAAACCAAACCATCCGTTTTCATGAGATAA AACGAGCTCCTCTTGCTTATGATGTTGCAAACGCTTCGGTATGTCGCCTC CGGATGAGAAGCGGTTCGCCTTGTATTGTGAGTTCCAAGTGTTTGCTGCG GTTTTCGGGTAAACAGGGCGGTGGTTCGATCTTGCTTGGAGGCAGTCCGG GTGACTTGAGGAGTCACCTGATTCGCTCGTTGCAGGTTAGTTGCACAAGC AAGAGGCGTCTTGGCAGCCATTTGCATATGTTTTGGTCGTCCTTCCCTGC GATGTCTCCCGCGGAAATTCCCAAGCTCTCAAGCTTGGGCTTCCCAGACC ATTTGAACAAATTTGTGCGTCGGTGG
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Coding sequence (CDS) from alignment at C-linearis_contig82:668106..674531+

>mRNA_C-linearis_contig82.16018.1 ID=mRNA_C-linearis_contig82.16018.1|Name=mRNA_C-linearis_contig82.16018.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2688bp|location=Sequence derived from alignment at C-linearis_contig82:668106..674531+ (Chordaria linearis ClinC8C monoicous)
ATGAAGGTCAAGACTATAAGCCGCGTGGAGGAGTCCTACACTCGAGACTG
CAAAGGCGACCGCCTCCAAGTGCACCGAAATCGCGATCCCTCCCTCCATC
CTTTTGAGAAGATGAAGGTCAAGACTATAAGCCGCGTGGAGGAGTCCTAC
ACTCGAGACTGCAAAGGCGACCGCCTCCAAGTGCACCGAAATCGCGATCC
CTCCCTCCATCCTTTTGAGAAGGCGAGAGAGTACACCCGAGCACTGACGG
CGGTGAAGCTCGACAAGATGTTCGCTAAGCCGTTGATCGGAGCGTTGGAT
GGGCACGGGGATGGTGTTTTCTGCTCAGCATCAAGCAGGAGAAATCTTGT
TCAGTTTTTGTCAGGCGAGAGAGTACACCCGAGCACTGACGGCGGTGAAG
CTCGACAAGATGTTCGCTAAGCCGTTGATCGGAGCGTTGGATGGGCACGG
GGATGGTGTTTTCTGCTCAGCATCAAGCAGGAGAAATCTTGTTCAGTTTT
TGTCAGGTGCGTGTGACGGGGAGATCCGGTTGTGGGACCTGTCCCGCCGC
AGCTGCGTGTGGCGGGCGGTGGGCCACCAGGGCTTCGTCCGAGGGCTGGC
GGTCACGCCGGGCGGGGAGAGCTTCTTGTCCGTGGGGGACGACGGGATGG
TGAAGCAGTGGGATCTCGGCGTGGCTTCTGATCTCACACAGGTGCGTGTG
ACGGGGAGATCCGGTTGTGGGACCTGTCCCGCCGCAGCTGCGTGTGGCGG
GCGGTGGGCCACCAGGGCTTCGTCCGAGGGCTGGCGGTCACGCCGGGCGG
GGAGAGCTTCTTGTCCGTGGGGGACGACGGGATGGTGAAGCAGTGGGATC
TCGGCGTGGCTTCTGATCTCACACAGACGCCGGAGCCCACGGCGACTTGG
ATGGGCAAGTCGGGCGGTTTCAAGTCGCTCGACCATCACTGGACGGACGC
CAAGTTCGCCACCGCGGGCGACTCGGTAGACCTGTGGGACCACAGCAGGG
CAGAGCCCACGCTGTCGTACCAGTGGGGCGCCGACAGCAACAACTGCGTG
AGACGCCGGAGCCCACGGCGACTTGGATGGGCAAGTCGGGCGGTTTCAAG
TCGCTCGACCATCACTGGACGGACGCCAAGTTCGCCACCGCGGGCGACTC
GGTAGACCTGTGGGACCACAGCAGGGCAGAGCCCACGCTGTCGTACCAGT
GGGGCGCCGACAGCAACAACTGCGTGAGGTTCAACCCCGCGGAGAGGTGC
TTGGTGGCGAGCACCGGTTCCAGCCGCGAAGTGTGCCTCTACGACACCAG
GGCGTCCGTTCCGATGCGCAAGGTTCAACCCCGCGGAGAGGTGCTTGGTG
GCGAGCACCGGTTCCAGCCGCGAAGTGTGCCTCTACGACACCAGGGCGTC
CGTTCCGATGCGCAAGGTTGTGTTGCAAATGCGATCAAACGCTGTGGCGT
GGAACCCTCAGGAGCCGATGAACTTCGTGTGCGCCAACGAAGACACGAAC
CTCTACACCTTTGACCTCAGGAACCTGAACCAGGTTGTGTTGCAAATGCG
ATCAAACGCTGTGGCGTGGAACCCTCAGGAGCCGATGAACTTCGTGTGCG
CCAACGAAGACACGAACCTCTACACCTTTGACCTCAGGAACCTGAACCAG
GCTTTGATGATCCACAAGGACCACGTGTCTGCGGTGATGGATGTGTCCTT
CTCGCCGACGGGGCAGGAGTTCGCGAGTGGGTCGTACGACCGCACCGTCC
GGGTGTTCCCGCACCGTTCGGGGCGCTCGAGGGAGGTCTACCACACCAAG
CGCATGCAGCGCGTGTTCTGCGTCAACTTCAGCGCGGACGCTAGGCTTTG
ATGATCCACAAGGACCACGTGTCTGCGGTGATGGATGTGTCCTTCTCGCC
GACGGGGCAGGAGTTCGCGAGTGGGTCGTACGACCGCACCGTCCGGGTGT
TCCCGCACCGTTCGGGGCGCTCGAGGGAGGTCTACCACACCAAGCGCATG
CAGCGCGTGTTCTGCGTCAACTTCAGCGCGGACGCTAGGTTTGTAGTGAC
GGGCAGCGACGACACGAACCTTCGAATATGGAAGGCCAATGCGTCGGAGA
AGCTTGGGAAGGTGGTGCCGAGGGAGGCTAGGAAGCAGGAATACAGGAAC
AGCCTCAAGAAGAGGTTTGTAGTGACGGGCAGCGACGACACGAACCTTCG
AATATGGAAGGCCAATGCGTCGGAGAAGCTTGGGAAGGTGGTGCCGAGGG
AGGCTAGGAAGCAGGAATACAGGAACAGCCTCAAGAAGAGGTACGAGCAC
ATGCCCGAAGTGCGGCGTATCGCGAAGCACCGACACGTGCCGAGGATCGT
CAAGAAGGCGGCAGAGGCAGAGCGCGTGCAAAGGGACAAGCAGCGCCGGA
AGGTACGAGCACATGCCCGAAGTGCGGCGTATCGCGAAGCACCGACACGT
GCCGAGGATCGTCAAGAAGGCGGCAGAGGCAGAGCGCGTGCAAAGGGACA
AGCAGCGCCGGAAGGTCGACAACCGCATCAAACACAGCAAGGCCGGGACC
GTGGAGACGGTGCCAGAACGGAAGAAGAAGGTCATCAAGGAGCTCACGTA
GGTCGACAACCGCATCAAACACAGCAAGGCCGGGACCGTGGAGACGGTGC
CAGAACGGAAGAAGAAGGTCATCAAGGAGCTCACGTAG
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