mRNA_C-linearis_contig82.16018.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: D7FIH9_ECTSI (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI) HSP 1 Score: 877 bits (2267), Expect = 5.670e-316 Identity = 429/447 (95.97%), Postives = 443/447 (99.11%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT 1394
MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRAL +VKLDKMFAKPL+GALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGL+VTP G SFLS GDDGMVKQW+LGVASDL++TPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCL+ASTGSSREVCLYDTRA+VPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHR+GRSREVYHTKRMQRVFCVNFSADARFV+TGSDDTNLRIWKANASEKLGKVVPREARKQEYR+SLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDK+RRKVDNRIKHSKAGTVETVPERKKK++KELT
Sbjct: 1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT 447
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A836C9W7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W7_9STRA) HSP 1 Score: 623 bits (1607), Expect = 4.390e-216 Identity = 303/447 (67.79%), Postives = 361/447 (80.76%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKELT 1394
MK+KTISR+EE YTRDCK D +++HRN DP LHPFEKAREY RAL A KLDKMFAKP IGALDGH DGVFC+A+S +NLVQFLSGACDGE+R+WDLSRR+CVW+A H GFVRG+AVTP G SFLS GDDG+VK+WDL +ASDL + P PTA W GK GF++LDHHW DA FATA D+V+LWD RAEPT +++WGAD+ N VRFNPAERCL+ASTGS R LYD RA+ P+RKV L+MRSN VAWNP+ P F A ED YTFD+R L AL++HKDHV AVM V+FSPTG+E A+ YDRT+R+F R GRSREVYHT+RMQR FCV +SADAR+V++GSDDT +RIWKA ASE+LG +VPREAR+ Y ++LK+RY MP+VRRIAKHRHVPR V+ AA AE VQRDK +RK DN +H+K G VPER+++VI E T
Sbjct: 1 MKIKTISRLEEHYTRDCKTDVVKIHRNLDPKLHPFEKAREYGRALQATKLDKMFAKPFIGALDGHTDGVFCTATSPKNLVQFLSGACDGEVRVWDLSRRACVWKAAAHTGFVRGVAVTPDGRSFLSAGDDGLVKRWDLAIASDLEERPRPTAQWTGKM-GFRALDHHWGDATFATASDAVELWDAERAEPTHAFRWGADAVNSVRFNPAERCLLASTGSDRGAALYDARAAAPLRKVFLRMRSNGVAWNPRVPAQFALACEDHCAYTFDVRRLGAALVVHKDHVGAVMAVAFSPTGRELATAGYDRTLRIFGARDGRSREVYHTQRMQRAFCVAYSADARYVLSGSDDTCVRIWKARASERLGAIVPREARRLRYLDTLKRRYADMPDVRRIAKHRHVPRAVRGAARAEGVQRDKAKRKADNVRRHAKDGGDAPVPERRRRVIAEQT 446
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A024UAB8_9STRA (Sof1 domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAB8_9STRA) HSP 1 Score: 554 bits (1428), Expect = 1.100e-188 Identity = 273/469 (58.21%), Postives = 348/469 (74.20%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQR-----------------------VFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
MKVKTISRVE+++T++ DR ++HRN DP LHPFE+ REYTRAL AVKLDK+FAKP +GALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW GH GFVRGL V P G +F S +D +KQW + +A++ +PEP T+ GK F +DHHW++ FAT V +WDH+R++P Y WGADS V+FNPAE L+ASTGS R V LYDTR + MRK+V++MR+NA+AWNP EP +F ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F RS +SREVYHTKRMQR +F V FSADA+FV++GSDDTN+RIWKA AS LGK+ PRE +K EY ++LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++ ++++ +K+ N KHSK G V V RKK VI+++
Sbjct: 1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKE-SFMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGGLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 467
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A418B2S4_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2S4_9STRA) HSP 1 Score: 554 bits (1428), Expect = 6.980e-184 Identity = 273/469 (58.21%), Postives = 348/469 (74.20%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQR-----------------------VFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
MKVKTISRVE+++T++ DR ++HRN DP LHPFE+ REYTRAL AVKLDK+FAKP +GALDGH D V C A+S ++LVQF+SGACDGEIRLWDL RR CVW GH GFVRGL V P G +F S +D +KQW + +A++ +PEP T+ GK F +DHHW++ FAT V +WDH+R++P Y WGADS V+FNPAE L+ASTGS R V LYDTR + MRK+V++MR+NA+AWNP EP +F ANED NLYTFD+RNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F RS +SREVYHTKRMQR +F V FSADA+FV++GSDDTN+RIWKA AS LGK+ PRE +K EY ++LKKRY+H+ EV+RIAKHRHVP+ +KKAA A++ ++++ +K+ N KHSK G V V RKK VI+++
Sbjct: 335 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKE-SFMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVKFNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGWLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 801
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A482SJF6_9ARCH (Sof1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJF6_9ARCH) HSP 1 Score: 535 bits (1377), Expect = 2.510e-181 Identity = 262/446 (58.74%), Postives = 332/446 (74.44%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
MK+KTISR EE Y R K D ++VHRNRDP +HPFE+AREY RA+ A KLDK+FAKP +GALDGH DGV+C +S R +LV F+SG+CDGE+R+WDLS + CVW A+ H+GFVRG+A G +F S GDD ++K W L + P + S S+DHHW D++FAT+GD V +WD +RA+P +Y+WGADS CVR+NPAE CL+ASTG+ R VCLYD R+S+PMRK+V+ M +N VAWNP+EPMNF A+ED NLYTFD+R L+ ALMIHKDHV AVMDV++SPTG+EF S SYDRTVR+F SG+SRE YHTKRMQRVFC FSADA +V++GSDDTN+RIW++ AS+ R RK++Y SLKKR+ HMPE++R+ + +P+ ++KA VQR Q RK +NRIKHSK G+V ERKK VIKEL
Sbjct: 1 MKIKTISRTEEDYVRKSKLDIVKVHRNRDPVVHPFERAREYARAVVATKLDKIFAKPFVGALDGHKDGVYCMSSVRSHLVPFISGSCDGELRVWDLSTKHCVWHAIAHEGFVRGVAPDVAGNAFYSCGDDKVIKLWALQHQLEEEGEVSPLNV-IHSSHSMTSIDHHWVDSQFATSGDVVSIWDGTRAQPINTYKWGADSVLCVRYNPAEACLLASTGNDRSVCLYDLRSSLPMRKMVMAMNANKVAWNPREPMNFTLASEDYNLYTFDMRKLDHALMIHKDHVGAVMDVAYSPTGREFVSASYDRTVRIFNVTSGKSREAYHTKRMQRVFCSAFSADAEYVLSGSDDTNVRIWRSVASKSGAVDSGRAERKKQYMQSLKKRFAHMPEIKRMNSDKKLPKAIRKAKGIMHVQRLSQHRKTENRIKHSKEGSVILPTERKKAVIKEL 445
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: M4C0L6_HYAAE (DDB1- and CUL4-associated factor 13 n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4C0L6_HYAAE) HSP 1 Score: 528 bits (1361), Expect = 5.080e-179 Identity = 262/446 (58.74%), Postives = 331/446 (74.22%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
M+V+TISRVE+ +T++ + D+L+V RN DP+LHPFE+ REYTRAL AVKL++MFAKP IGALDGH DGV A+S +LV +SGA DGE+R+WDL RR CVW GH+GFVRGLAVTP G +F S +D VKQW L V S+ P AT+ K F +DHHW+ FAT G V +WD SR+ PT + WGADS N V FNPAE L+ASTGS R + LYD R + MRK+V++MRSNA+AWNP EPMNF ANE+ NLYTFD+R +N+A+M+HKDHVSAVMDV++SPTG+EF +GSYDRT+R+F RS +SREVYHT+RMQR AD+ FV++GSDDTN+R+WKA AS+KL KV PRE RK EY SLK RY+H+ E+ RIAKHRHVP+ +KKAA A+R + ++K+ NR H+K G V R+K V+KE+
Sbjct: 1 MRVQTISRVEKDFTQEVQSDKLKVFRNYDPALHPFERPREYTRALNAVKLERMFAKPFIGALDGHCDGVTALATSPSSLVPLVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLAVTPDGSTFYSCSEDKTVKQWALRVKSEDEDVPTALATFTSKE-PFLGIDHHWSQKMFATCGSKVQVWDPSRSTPTHEFAWGADSINSVHFNPAEASLLASTGSDRNITLYDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANENHNLYTFDMRKMNRAMMVHKDHVSAVMDVAYSPTGREFVAGSYDRTIRIFNVRSTKSREVYHTQRMQR-------ADSNFVLSGSDDTNIRVWKAEASKKLSKVGPRERRKIEYNESLKDRYQHLREISRIAKHRHVPKAIKKAAHAKREASSRDQKKMANRRAHAKEGAVPHTNIREKVVVKEM 438
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A6P4ZG13_BRABE (DDB1- and CUL4-associated factor 13 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZG13_BRABE) HSP 1 Score: 501 bits (1289), Expect = 4.610e-168 Identity = 240/445 (53.93%), Postives = 315/445 (70.79%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKE 1388
MK+K +SR + Y R+ K D ++ RN DP+LHPFE AREYTRAL A KL+++FAKP +GALDGH DGV C A +L L+GACDGEI++W+L R C H GFVRG+ VTP + LS+GDD +K W L + EP T +GKS F +DHHW DA FAT G +VD+WDH+RAEP S+ WG DS NCVRFNP E+ +AS + R + LYDTR S P+RKV+L MRSN +AWNP E F ANED NLY+FD+R L IH DHV+AV+D+ +SPTG+EF SGS+D+T+R+FP GRSREVYHTKRMQRVFC+ +S D +++++GSD+TN+RIWKA A+EK+GK+ PRE Y + LK++++H P+VRRIA+HRHVP+ V R+ +D +RRK +NRI+HSK G+++ ER+K V+ E
Sbjct: 1 MKIKVLSRNPDDYGRETKRDIQRLPRNYDPALHPFEAAREYTRALNATKLERVFAKPFVGALDGHRDGVNCMAKHPGSLSTLLTGACDGEIKIWNLGSRDCRRTIQAHTGFVRGMCVTPDHGNVLSIGDDKTIKMWSLTSPEAGEEEEEPVQTILGKS-IFTGIDHHWKDATFATCGQTVDIWDHARAEPLRSFSWGVDSLNCVRFNPIEKHYLASCAADRSIILYDTRGSSPLRKVILNMRSNVLAWNPMEAFVFTVANEDHNLYSFDIRRLTSPFNIHMDHVNAVLDLDYSPTGREFVSGSFDKTIRIFPLEKGRSREVYHTKRMQRVFCIKWSLDNKYILSGSDETNVRIWKAKAAEKIGKLTPREESALTYSDKLKEKFQHHPQVRRIARHRHVPKEVYHLTRQTRIMKDSRRRKEENRIRHSKPGSIKKKREREKVVVAE 444
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: UPI00106B535B (DDB1- and CUL4-associated factor 13-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B535B) HSP 1 Score: 488 bits (1255), Expect = 5.830e-163 Identity = 236/443 (53.27%), Postives = 314/443 (70.88%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVI 1382
MKVK +SR Y R+CK D ++ RN DPSLHPFE AREYTRAL A KL+++FAKP +G+LDGH DGV C A +++L LSG+C+GE++LW+L ++ C+ H GFVRGLAV P GE F+SVGDD ++K W S T++ T +GK+ F+ +DHHW D +AT GD VD+W R+EP S+QWG D+ + V+FNP E L+AST S R V LYD R + P+RK++++MRSN VAWNP E NF ANED+NLYT+D+R L+ A+ +H+DHV+AV+DV +SPTGQEF SGS+D+T+R+FP+ G SREVYHTKRMQRVFCV +S DA FV++GSD+ N+RIWKA AS KLG + PR+ Y LK+RY+ P+V RI +HRHVP + KAA +R+ ++ + +NR HS G V V ERKK ++
Sbjct: 1 MKVKVLSRNPADYIRECKSDIHKIPRNIDPSLHPFEGAREYTRALNAAKLERVFAKPFVGSLDGHTDGVNCMAKFQKSLSLLLSGSCNGEVKLWNLPKKECIRSYAAHSGFVRGLAVVPTGEIFISVGDDKLIKHWSWKQDSS-TKSSHLVHTIVGKT-MFQGVDHHWKDNVYATCGDQVDIWHEDRSEPVRSFQWGVDTVHSVKFNPVETNLLASTASDRGVVLYDIRGATPLRKLLMKMRSNTVAWNPMEAFNFTVANEDSNLYTYDMRRLDFAVSVHRDHVAAVLDVDYSPTGQEFVSGSFDKTIRIFPYNQGHSREVYHTKRMQRVFCVKWSPDAEFVLSGSDEMNVRIWKAEASAKLGPLAPRQKAALTYNKKLKERYKFHPQVLRILRHRHVPSAIYKAAREKRIMLQSRKTREENRRLHSAEGKVPYVAERKKHIV 441
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: A0A7S0MFA3_9CRYP (DDB1- and CUL4-associated factor 13 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFA3_9CRYP) HSP 1 Score: 486 bits (1252), Expect = 2.030e-162 Identity = 242/444 (54.50%), Postives = 310/444 (69.82%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLGVASDLTQTPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIK 1385
MKVK ++RVEE +TR+ KGD ++ RN DP LHPFE+AREYTRAL AVKLDK+FAKP + AL GH D V C A SR L +SG+CDGE+RLWDL + W H GFVRG+A +P G++ S GDD VK W D + P T +G+ F LDHHWT+ AT G V +WDH R+EP + WG++S VRFNPAER ++ASTGS R L+D R++ +RK+V RSN + WNP E NFV ANED NLYTFD+R ++ AL +H DHVSAV+DV FSPTGQEF +GSYDRTVR+F H G SRE+YH KRMQRV+ V F+ DAR+V++ SDD N+R+W+A ASE + ++PRE R EYR LK+R++ PEVRRIA+HRH+PR V KA + + V + ++RK DN +HS+ G+V VPERKK ++K
Sbjct: 9 MKVKVLNRVEEDFTRERKGDVVKTFRNPDPVLHPFERAREYTRALNAVKLDKVFAKPFVRALSGHRDAVTCMARSRVKLTDIISGSCDGELRLWDLCTGNSRWTTTAHSGFVRGIAFSPEGDTIWSCGDDKTVKMWQRDPDEDESAIVSPIHTILGQH-AFLGLDHHWTEPIVATCGVDVQIWDHQRSEPIHTLTWGSESVLSVRFNPAERQVLASTGSDRSTVLHDLRSATAIRKLVTAKRSNKMCWNPMEAFNFVLANEDNNLYTFDMRKMDCALCVHMDHVSAVLDVDFSPTGQEFVTGSYDRTVRIFRHNEGHSREIYHGKRMQRVWSVLFTGDARWVLSASDDFNVRLWRAKASEGVKPLLPREQRGHEYRERLKERFKEAPEVRRIARHRHLPRAVLKAGKLKGVIKQSKKRKEDNARRHSRPGSVPHVPERKKHIVK 451
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Match: W1P0N3_AMBTC (DDB1- and CUL4-associated factor 13 n=3 Tax=Magnoliopsida TaxID=3398 RepID=W1P0N3_AMBTC) HSP 1 Score: 485 bits (1248), Expect = 8.400e-162 Identity = 235/452 (51.99%), Postives = 324/452 (71.68%), Query Frame = 3
Query: 54 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLDKMFAKPLIGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLAVTPGGESFLSVGDDGMVKQWDLG--VASDLTQTPE----PTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLVASTGSSREVCLYDTRASVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRSGRSREVYHTKRMQRVFCVNFSADARFVVTGSDDTNLRIWKANASEKLGKVVPREARKQEYRNSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKQRRKVDNRIKHSKAGTVETVPERKKKVIKEL 1391
MKVK ISR E +TR+ D +V RN DP LH EKA EY RAL A KL+K+FAKP +GA+DGH D + C A + L SG+ DG+IRLWD+S RS V + VGH+G VRGLA + G +S G+D V+ W + +DL E P A ++ K+ F+++DH W FAT G VD+WDHSR+EP S+ WG+D+ VRFNPA + ++A++ S R + LYD R ++P +K+V+Q R+NA+AWNP+EPMNF ANED N Y++D+RN+ QA +H+DHVSAVMD+ +SPTG+EF +GSYDRTVR+F + +G SRE+YHTKRMQRVFCV FS DA +V++GSDDTNLR+WKA ASE+LG ++PRE +KQEY +++K+R++H+PEV+RI +HRH+P+ + KAA R D +++K + + HS GTV TVP RK++++ E+
Sbjct: 1 MKVKVISRSAEEFTRERSQDLQRVFRNFDPKLHAQEKAVEYARALNAAKLEKIFAKPFLGAMDGHVDAISCMAKNPNYLKGIFSGSMDGDIRLWDISSRSTVQQFVGHKGAVRGLAASTDGSILVSCGNDCTVRLWSIPGPKIADLDDASENASNPLAVYVSKN-AFRAVDHQWDGNLFATVGAQVDIWDHSRSEPVTSFAWGSDTVVSVRFNPAHKDILATSASDRSITLYDLRMALPSKKIVMQTRTNAIAWNPREPMNFSLANEDCNCYSYDMRNMEQAKCVHRDHVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNAGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERKKQEYLDAVKERFKHLPEVKRIVRHRHLPKPIYKAASLRRTMADAEKKKEERKRAHSAPGTVVTVPLRKRRIVSEI 451 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig82.16018.1 >prot_C-linearis_contig82.16018.1 ID=prot_C-linearis_contig82.16018.1|Name=mRNA_C-linearis_contig82.16018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=448bp MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALTAVKLback to top mRNA from alignment at C-linearis_contig82:668106..674531+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig82.16018.1 ID=mRNA_C-linearis_contig82.16018.1|Name=mRNA_C-linearis_contig82.16018.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6426bp|location=Sequence derived from alignment at C-linearis_contig82:668106..674531+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig82:668106..674531+ >mRNA_C-linearis_contig82.16018.1 ID=mRNA_C-linearis_contig82.16018.1|Name=mRNA_C-linearis_contig82.16018.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2688bp|location=Sequence derived from alignment at C-linearis_contig82:668106..674531+ (Chordaria linearis ClinC8C monoicous)back to top |