prot_C-linearis_contig82.16013.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16013.1
Unique Nameprot_C-linearis_contig82.16013.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length87
Homology
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BLAST of mRNA_C-linearis_contig82.16013.1 vs. uniprot
Match: D8LGW6_ECTSI (Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGW6_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 8.250e-35
Identity = 73/91 (80.22%), Postives = 78/91 (85.71%), Query Frame = 0 
Query:    1 MEEGMRRTLLRGMSAMNMEAMRLMTEARDAGQEEFGLSGTT--TGTRYSAVGTDA-SYAPRAAGTTQH--RMSEEWPRPLTPPRPAAPSAR 86
            MEEGMRRTLLRGMSAMNMEAMRLMTEARDAG++EFGLSGTT  TGTRYSA GTDA S+  RAA    H  R+SEEWPRPLTPPRPA PS+R
Sbjct:  130 MEEGMRRTLLRGMSAMNMEAMRLMTEARDAGEDEFGLSGTTATTGTRYSAGGTDAPSFGARAAAGAAHHSRLSEEWPRPLTPPRPAVPSSR 220
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGW6_ECTSI8.250e-3580.22Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:628163..629738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16013.1mRNA_C-linearis_contig82.16013.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 627003..636326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16013.1 ID=prot_C-linearis_contig82.16013.1|Name=mRNA_C-linearis_contig82.16013.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=87bp
MEEGMRRTLLRGMSAMNMEAMRLMTEARDAGQEEFGLSGTTTGTRYSAVG
TDASYAPRAAGTTQHRMSEEWPRPLTPPRPAAPSAR*
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