prot_C-linearis_contig82.16012.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16012.1
Unique Nameprot_C-linearis_contig82.16012.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length324
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 201..242
e-value: 1.9E-4
score: 21.5
coord: 110..138
e-value: 5.3E-5
score: 23.3
coord: 289..324
e-value: 2.5E-4
score: 21.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 175..322
e-value: 1.0E-7
score: 32.7
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 6..138
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 175..324
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 6..138
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 175..324
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 15..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:550606..551606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16012.1mRNA_C-linearis_contig82.16012.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 550067..551606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16012.1 ID=prot_C-linearis_contig82.16012.1|Name=mRNA_C-linearis_contig82.16012.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=324bp
MYGGEFKQPLDDVVWPECLEELFLGERFNQYIVSVVWPSHLKRLIFDGSE
FNQGLDGVAWAECLEQLHLGGSSTNPSRTQSGLHLSRFNQSLDGVVWPQR
LEQLNLGGAFNRPITGVVWPTSLEQLHLGRAFNQPITNIVWHSSMKRWAS
GGPAPCFRHKQPVMGSMRDHTILGGAFNQPIAGVAWPSFLKHLALGTNGI
FDQPLDGVVWPASLEELTLEAKFNQPIAGVVWPSSLRRLLLSGSFNHALD
GVVWSASLEELTLAKTFNQPIANVVWPSSLRRLVISGSFNHPLDGVAWPK
RLEELTFLGRKFNQPIANVVWPSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf