prot_C-linearis_contig80.15926.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15926.1
Unique Nameprot_C-linearis_contig80.15926.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length201
Homology
BLAST of mRNA_C-linearis_contig80.15926.1 vs. uniprot
Match: B5LWM7_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM7_9PHYC)

HSP 1 Score: 234 bits (596), Expect = 7.640e-73
Identity = 107/196 (54.59%), Postives = 141/196 (71.94%), Query Frame = 0
Query:    4 LGKYIAVADYVETETTSPAGAXXXXXXXSSEATFKTYVTEILEGRDEQCVYQSLEMADPWNQKDSCHLMAHSACKGKPVDEDPSNRLACSTQLHRGLDGTSDRYPPWIRIKVKNVENEPVPCFGKNGREHFRFRVNLLIDFHKDEQKLHHGICWKEGTKDDGEAPVETFVHVVNYDVFEKGVEWKFRDTTEIWESL 199
            LG+++ + DYVE ET SP  +        S  +  ++VTEIL+ + E CVYQS+E A  ++QKD CHL+AH  CKG P+D DPSNRLACSTQLHR LDGTS R+PPW R+KVK V+  PV C G   ++H R+RV+L IDF  +E + +HG  WK+G++DDGE+PVETFV+V +YDVF   VEWK++ TT IW +L
Sbjct:  188 LGRFVFMGDYVEEETDSPPDSRARKRSRESAESLTSFVTEILDPKSELCVYQSVE-AQGYSQKDGCHLLAHCECKGTPMDSDPSNRLACSTQLHRALDGTSKRHPPWARVKVKGVDINPVLCEGVGVKQHNRYRVDLYIDFMSEEHRRNHGFYWKDGSRDDGESPVETFVYVKDYDVFTNCVEWKYKHTTAIWAAL 382          
BLAST of mRNA_C-linearis_contig80.15926.1 vs. uniprot
Match: G4YMK9_PHYSP (Crinkler domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YMK9_PHYSP)

HSP 1 Score: 63.5 bits (153), Expect = 2.130e-8
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 0
Query:   42 TEILEGRDEQCVYQSLEMADPW----NQKDSCHLMAHSACKGKP----VDEDPSNRLACSTQLHRGLDGTSDRYPPWIRIKVKNVENEPVPCFGKNGREHFRFRVNLLIDFHKDEQKLHHGICWKEG--TKDDGEAPVETFVHVVNYDVFEKGVEWKFRDTTEIWES 198
            T I++   ++  YQ +E  D W     +  SCH+M+   CK  P     D DPSNRLA S ++H   D  S   P  ++I V++     V   G       R+++NL++            +  K+G    DDG   + TFV+V N  VF   +EWK ++T + W  
Sbjct:  230 TSIVDVATDEFKYQRIEN-DEWFGTVGKAQSCHVMSREHCKKHPSYNNYDNDPSNRLALSAEMHEWFDARSFTVPT-LKISVESTSEGFV--IGN------RYKINLVVRAWNAGFAKLIALRLKDGFVLSDDG-LEMRTFVYVQNKKVFCDCMEWKRKETEKKWRE 385          
BLAST of mRNA_C-linearis_contig80.15926.1 vs. uniprot
Match: A0A329RTD1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RTD1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.470e-7
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = 0
Query:   42 TEILEGRDEQCVYQSLEMADPW----NQKDSCHLMAHSACKG----KPVDEDPSNRLACSTQLHRGLDGTSDRYPPWIRIKVKNVENEPVPCFGKNGREHFRFRVNLLIDFHKDEQKLHHGICWKEG--TKDDGEAPVETFVHVVNYDVFEKGVEWKFRDTTEIWES 198
            T I++   ++  YQ +E ++ W     +  SCHLM+   C+        D D SNRLA ++ +H   DG S   P  + I V++V   PV   G       R++VNL++            +  KEG    +DG   + T V+V+N  VF + +EWK ++  + W+S
Sbjct:  126 TSIVDVVTDEFKYQRIE-SEEWFGTVGKAQSCHLMSREHCRRYASYHKYDNDQSNRLALTSDMHDWYDGRSFAVPV-MNISVESVSEGPV--VGS------RYKVNLIVRALNAGYARLISLHLKEGFVASEDG-LEMRTSVYVLNAKVFCECMEWKRKEIDKQWKS 281          
BLAST of mRNA_C-linearis_contig80.15926.1 vs. uniprot
Match: G5AGM6_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AGM6_PHYSP)

HSP 1 Score: 56.2 bits (134), Expect = 3.940e-6
Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 0
Query:   13 YVETETTSPAGAXXXXXXXSSEATFKTYVTEILEGRDEQCVYQSLEMADPW----NQKDSCHLMAHSACKGKP----VDEDPSNRLACSTQLHRGLDGTSDRYPPWIRIKVKNVENEPVPCFGKNGREHFRFRVNLLIDFHKDEQKLHHGICWKEG--TKDDGEAPVETFVHVVNYDVFEKGVEWKFRDTTEIWES 198
            YV  +T SP           S  TF +  T I++   ++  YQ +E ++ W     +  SCH+M+   C+  P     D DPSNRLA S ++H   D  S   P  ++I V++     V   G       R++V+L++            +  KEG    DDG   + T ++V N  VF   +EWK ++  + W  
Sbjct:   59 YVPDDTESPQ---------VSMTTFSSN-TSIVDVATDEFKYQRIE-SEEWFGSVGKAQSCHVMSREHCRKYPSYKKYDNDPSNRLALSAEMHEWFDARSYAVPT-MKISVESTSEGFV--IGN------RYKVDLVVRAWNAGFARLLSLRLKEGFAVSDDG-LEMRTSIYVQNKKVFCDCMEWKRKEIEKKWRE 233          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
B5LWM7_9PHYC7.640e-7354.59Uncharacterized protein n=1 Tax=Feldmannia species... [more]
G4YMK9_PHYSP2.130e-830.54Crinkler domain-containing protein n=1 Tax=Phytoph... [more]
A0A329RTD1_9STRA4.470e-729.94Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
G5AGM6_PHYSP3.940e-628.06Uncharacterized protein n=3 Tax=Phytophthora sojae... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:798022..798624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15926.1mRNA_C-linearis_contig80.15926.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 797863..798880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15926.1 ID=prot_C-linearis_contig80.15926.1|Name=mRNA_C-linearis_contig80.15926.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=201bp
MVCLGKYIAVADYVETETTSPAGAQARARSRSSEATFKTYVTEILEGRDE
QCVYQSLEMADPWNQKDSCHLMAHSACKGKPVDEDPSNRLACSTQLHRGL
DGTSDRYPPWIRIKVKNVENEPVPCFGKNGREHFRFRVNLLIDFHKDEQK
LHHGICWKEGTKDDGEAPVETFVHVVNYDVFEKGVEWKFRDTTEIWESLK
*
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